RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 PLS1Q14651 629 aa17.49■□□□□ 0.39
USP43-204ENST00000573955 EPHA7Q15375 998 aa17.49■□□□□ 0.39
USP43-204ENST00000573955 ARHGEF16Q5VV41 709 aa17.49■□□□□ 0.39
USP43-204ENST00000573955 SLC35F6Q8N357 371 aa17.49■□□□□ 0.39
USP43-204ENST00000573955 KLRG1Q96E93 195 aa17.49■□□□□ 0.39
USP43-204ENST00000573955 NUCKS1Q9H1E3 243 aaKnown RBP17.49■□□□□ 0.39
USP43-204ENST00000573955 ZNF112Q9UJU3 913 aa17.49■□□□□ 0.39
USP43-204ENST00000573955 TMEM150BA6NC51 233 aa17.49■□□□□ 0.39
USP43-204ENST00000573955 H3BQF6 201 aa17.49■□□□□ 0.39
USP43-204ENST00000573955 CETN3O15182 167 aa17.49■□□□□ 0.39
USP43-204ENST00000573955 ARHGAP25P42331 645 aa17.49■□□□□ 0.39
USP43-204ENST00000573955 KCNMA1Q12791 1236 aa17.49■□□□□ 0.39
USP43-204ENST00000573955 KAT2BQ92831 832 aa17.49■□□□□ 0.39
USP43-204ENST00000573955 CEP63Q96MT8 703 aa17.49■□□□□ 0.39
USP43-204ENST00000573955 NACC1Q96RE7 527 aa17.49■□□□□ 0.39
USP43-204ENST00000573955 GINM1Q9NU53 330 aa17.49■□□□□ 0.39
USP43-204ENST00000573955 LRRC53A6NM62 1247 aa17.48■□□□□ 0.39
USP43-204ENST00000573955 ATP9AO75110 1047 aa17.48■□□□□ 0.39
USP43-204ENST00000573955 MEA1Q16626 185 aa17.48■□□□□ 0.39
USP43-204ENST00000573955 PCNX4Q63HM2 1172 aa17.48■□□□□ 0.39
USP43-204ENST00000573955 EPM2AIP1Q7L775 607 aaPredicted RBP17.48■□□□□ 0.39
USP43-204ENST00000573955 RIT2Q99578 217 aa17.48■□□□□ 0.39
USP43-204ENST00000573955 JPH2Q9BR39 696 aaPredicted RBP17.48■□□□□ 0.39
USP43-204ENST00000573955 AGO4Q9HCK5 861 aaKnown RBP17.48■□□□□ 0.39
USP43-204ENST00000573955 RBBP6Q7Z6E9 1792 aaKnown RBP17.48■□□□□ 0.39
USP43-204ENST00000573955 ARHGEF35A5YM69 484 aa17.48■□□□□ 0.39
USP43-204ENST00000573955 DHX15O43143 795 aaKnown RBP17.48■□□□□ 0.39
USP43-204ENST00000573955 SORBS3O60504 671 aa17.48■□□□□ 0.39
USP43-204ENST00000573955 PAX7P23759 505 aa17.48■□□□□ 0.39
USP43-204ENST00000573955 HERVK_113P62684 666 aa17.48■□□□□ 0.39
USP43-204ENST00000573955 AP1ARQ63HQ0 302 aa17.48■□□□□ 0.39
USP43-204ENST00000573955 CACNA2D4Q7Z3S7 1137 aa17.48■□□□□ 0.39
USP43-204ENST00000573955 A1CFQ9NQ94 594 aaKnown RBP17.48■□□□□ 0.39
USP43-204ENST00000573955 UBIAD1Q9Y5Z9 338 aa17.48■□□□□ 0.39
USP43-204ENST00000573955 HOXA7P31268 230 aaPredicted RBP17.47■□□□□ 0.39
USP43-204ENST00000573955 CASP4P49662 377 aa17.47■□□□□ 0.39
USP43-204ENST00000573955 DCAF17Q5H9S7 520 aaPredicted RBP17.47■□□□□ 0.39
USP43-204ENST00000573955 B3GNT9Q6UX72 402 aa17.47■□□□□ 0.39
USP43-204ENST00000573955 TRIM59Q8IWR1 403 aa17.47■□□□□ 0.39
USP43-204ENST00000573955 PAIP2Q9BPZ3 127 aaKnown RBP17.47■□□□□ 0.39
USP43-204ENST00000573955 PDCD2LQ9BRP1 358 aa17.47■□□□□ 0.39
USP43-204ENST00000573955 LSM14BQ9BX40 385 aaKnown RBP17.47■□□□□ 0.39
USP43-204ENST00000573955 ZSWIM4Q9H7M6 989 aa17.47■□□□□ 0.39
USP43-204ENST00000573955 PARVGQ9HBI0 331 aa17.47■□□□□ 0.39
USP43-204ENST00000573955 JADE2Q9NQC1 790 aa17.47■□□□□ 0.39
USP43-204ENST00000573955 PXMP2Q9NR77 195 aa17.47■□□□□ 0.39
USP43-204ENST00000573955 ETAA1Q9NY74 926 aa17.47■□□□□ 0.39
USP43-204ENST00000573955 ASTN1O14525 1302 aa17.47■□□□□ 0.39
USP43-204ENST00000573955 SSC5DA1L4H1 1573 aa17.47■□□□□ 0.39
USP43-204ENST00000573955 TFRCP02786 760 aaKnown RBP17.47■□□□□ 0.39
USP43-204ENST00000573955 COG2Q14746 738 aa17.47■□□□□ 0.39
USP43-204ENST00000573955 KIAA1328Q86T90 577 aa17.47■□□□□ 0.39
USP43-204ENST00000573955 A0A1W2PQJ5 194 aa17.46■□□□□ 0.39
USP43-204ENST00000573955 EFCAB8A8MWE9 144 aa17.46■□□□□ 0.39
USP43-204ENST00000573955 TMEM132BQ14DG7 1078 aa17.46■□□□□ 0.39
USP43-204ENST00000573955 EDRF1Q3B7T1 1238 aa17.46■□□□□ 0.39
USP43-204ENST00000573955 EAPPQ56P03 285 aaPredicted RBP17.46■□□□□ 0.39
USP43-204ENST00000573955 FIGNQ5HY92 759 aa17.46■□□□□ 0.39
USP43-204ENST00000573955 ODR4Q5SWX8 454 aa17.46■□□□□ 0.39
USP43-204ENST00000573955 TCERG1LQ5VWI1 586 aa17.46■□□□□ 0.39
USP43-204ENST00000573955 FUT8Q9BYC5 575 aa17.46■□□□□ 0.39
USP43-204ENST00000573955 PCDHB13Q9Y5F0 798 aa17.46■□□□□ 0.39
USP43-204ENST00000573955 FRMPD4Q14CM0 1322 aa17.46■□□□□ 0.39
USP43-204ENST00000573955 AKAP3O75969 853 aa17.46■□□□□ 0.39
USP43-204ENST00000573955 NR3C1P04150 777 aa17.46■□□□□ 0.39
USP43-204ENST00000573955 BCRP11274 1271 aa17.46■□□□□ 0.39
USP43-204ENST00000573955 ENOX2Q16206 610 aaKnown RBP17.46■□□□□ 0.39
USP43-204ENST00000573955 KCNV1Q6PIU1 500 aa17.46■□□□□ 0.39
USP43-204ENST00000573955 LRRC31Q6UY01 552 aa17.46■□□□□ 0.39
USP43-204ENST00000573955 TMOD4Q9NZQ9 345 aa17.46■□□□□ 0.39
USP43-204ENST00000573955 TRAF3IP3Q9Y228 551 aa17.46■□□□□ 0.39
USP43-204ENST00000573955 RCCD1A6NED2 376 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 CALUO43852 315 aaPredicted RBP17.45■□□□□ 0.38
USP43-204ENST00000573955 HIP1RO75146 1068 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 GNA14O95837 355 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 CYLC1P35663 651 aaPredicted RBP17.45■□□□□ 0.38
USP43-204ENST00000573955 POLR2FP61218 127 aaKnown RBP17.45■□□□□ 0.38
USP43-204ENST00000573955 SP4Q02446 784 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 KCNH2Q12809 1159 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 UGCGQ16739 394 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 CCDC122Q5T0U0 273 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 FOXR2Q6PJQ5 311 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 PPP4R3CPQ6ZMV5 832 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 FAM178BQ8IXR5 827 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 CCDC42Q96M95 316 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 ARHGAP20Q9P2F6 1191 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 TCEAL9Q9UHQ7 104 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 MRFAP1Q9Y605 127 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 COL11A1P12107 1806 aaPredicted RBP17.45■□□□□ 0.38
USP43-204ENST00000573955 PPFIA4O75335 1185 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 TADA3O75528 432 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 POTEJP0CG39 1038 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 GAP43P17677 238 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 DSG3P32926 999 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 MAP3K9P80192 1104 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 PADI6Q6TGC4 694 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 N4BP2L2Q92802 583 aaPredicted RBP17.45■□□□□ 0.38
USP43-204ENST00000573955 TRIM6Q9C030 488 aaPredicted RBP17.45■□□□□ 0.38
USP43-204ENST00000573955 EPC1Q9H2F5 836 aa17.45■□□□□ 0.38
USP43-204ENST00000573955 OLFML3Q9NRN5 406 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms