RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 MYOCDQ8IZQ8 938 aa31.12■■■□□ 2.57
SCARF1-207ENST00000573867 MYLIPQ8WY64 445 aa31.12■■■□□ 2.57
SCARF1-207ENST00000573867 SLC28A3Q9HAS3 691 aa31.12■■■□□ 2.57
SCARF1-207ENST00000573867 PADI3Q9ULW8 664 aa31.12■■■□□ 2.57
SCARF1-207ENST00000573867 IGKV6-21A0A0C4DH24 114 aa31.11■■■□□ 2.57
SCARF1-207ENST00000573867 TLL1O43897 1013 aa31.11■■■□□ 2.57
SCARF1-207ENST00000573867 ORC2Q13416 577 aaPredicted RBP31.11■■■□□ 2.57
SCARF1-207ENST00000573867 TMEM266Q2M3C6 531 aa31.11■■■□□ 2.57
SCARF1-207ENST00000573867 EYSQ5T1H1 3165 aa31.11■■■□□ 2.57
SCARF1-207ENST00000573867 SPRED2Q7Z698 418 aa31.11■■■□□ 2.57
SCARF1-207ENST00000573867 LOXHD1Q8IVV2 1947 aa31.11■■■□□ 2.57
SCARF1-207ENST00000573867 OSMRQ99650 979 aa31.11■■■□□ 2.57
SCARF1-207ENST00000573867 HSD17B14Q9BPX1 270 aa31.11■■■□□ 2.57
SCARF1-207ENST00000573867 SUGCTQ9HAC7 445 aa31.11■■■□□ 2.57
SCARF1-207ENST00000573867 NOL7Q9UMY1 257 aaKnown RBP31.11■■■□□ 2.57
SCARF1-207ENST00000573867 NOC2LQ9Y3T9 749 aaKnown RBP31.11■■■□□ 2.57
SCARF1-207ENST00000573867 PCDHB6Q9Y5E3 794 aa31.11■■■□□ 2.57
SCARF1-207ENST00000573867 AMHP03971 560 aa31.1■■■□□ 2.57
SCARF1-207ENST00000573867 OR52Z1P0C646 297 aa31.1■■■□□ 2.57
SCARF1-207ENST00000573867 PPP2R2DQ66LE6 453 aa31.1■■■□□ 2.57
SCARF1-207ENST00000573867 MCTP1Q6DN14 999 aa31.1■■■□□ 2.57
SCARF1-207ENST00000573867 RTN4RL1Q86UN2 441 aaPredicted RBP31.1■■■□□ 2.57
SCARF1-207ENST00000573867 USP38Q8NB14 1042 aa31.1■■■□□ 2.57
SCARF1-207ENST00000573867 ZNF668Q96K58 619 aaPredicted RBP31.1■■■□□ 2.57
SCARF1-207ENST00000573867 ADAMTS10Q9H324 1103 aa31.1■■■□□ 2.57
SCARF1-207ENST00000573867 TMX1Q9H3N1 280 aa31.1■■■□□ 2.57
SCARF1-207ENST00000573867 CYP26B1Q9NR63 512 aa31.1■■■□□ 2.57
SCARF1-207ENST00000573867 AKT3Q9Y243 479 aa31.1■■■□□ 2.57
SCARF1-207ENST00000573867 STXBP5LQ9Y2K9 1186 aa31.1■■■□□ 2.57
SCARF1-207ENST00000573867 ZSWIM4Q9H7M6 989 aa31.09■■■□□ 2.57
SCARF1-207ENST00000573867 ERVK-5Q9HDB9 667 aa31.09■■■□□ 2.57
SCARF1-207ENST00000573867 H3BQV1 296 aa31.08■■■□□ 2.57
SCARF1-207ENST00000573867 DKC1O60832 514 aaKnown RBP eCLIP31.08■■■□□ 2.57
SCARF1-207ENST00000573867 MAFO75444 373 aaPredicted RBP31.08■■■□□ 2.57
SCARF1-207ENST00000573867 YWHABP31946 246 aaKnown RBP31.08■■■□□ 2.57
SCARF1-207ENST00000573867 CRYBB1P53674 252 aaPredicted RBP31.08■■■□□ 2.57
SCARF1-207ENST00000573867 NLRP11P59045 1033 aaKnown RBP31.08■■■□□ 2.57
SCARF1-207ENST00000573867 TAP1Q03518 808 aa31.08■■■□□ 2.57
SCARF1-207ENST00000573867 LARP1BQ659C4 914 aaKnown RBP31.08■■■□□ 2.57
SCARF1-207ENST00000573867 TPH2Q8IWU9 490 aa31.08■■■□□ 2.57
SCARF1-207ENST00000573867 TOP1MTQ969P6 601 aa31.08■■■□□ 2.57
SCARF1-207ENST00000573867 MAP7D2Q96T17 732 aa31.08■■■□□ 2.57
SCARF1-207ENST00000573867 ZBED2Q9BTP6 218 aa31.08■■■□□ 2.57
SCARF1-207ENST00000573867 ENPP3O14638 875 aa31.07■■■□□ 2.56
SCARF1-207ENST00000573867 TMOD1P28289 359 aa31.07■■■□□ 2.56
SCARF1-207ENST00000573867 TECP42680 631 aa31.07■■■□□ 2.56
SCARF1-207ENST00000573867 PAK2Q13177 524 aa31.07■■■□□ 2.56
SCARF1-207ENST00000573867 FAM228AQ86W67 206 aa31.07■■■□□ 2.56
SCARF1-207ENST00000573867 RAD9AQ99638 391 aa31.07■■■□□ 2.56
SCARF1-207ENST00000573867 PRDM12Q9H4Q4 367 aa31.07■■■□□ 2.56
SCARF1-207ENST00000573867 GPC3P51654 580 aa31.06■■■□□ 2.56
SCARF1-207ENST00000573867 HTRA4P83105 476 aaPredicted RBP31.06■■■□□ 2.56
SCARF1-207ENST00000573867 CEP170P1Q96L14 293 aa31.06■■■□□ 2.56
SCARF1-207ENST00000573867 A0A087WWV3 80 aa31.05■■■□□ 2.56
SCARF1-207ENST00000573867 MGEA5O60502 916 aa31.05■■■□□ 2.56
SCARF1-207ENST00000573867 RPS6KA5O75582 802 aa31.05■■■□□ 2.56
SCARF1-207ENST00000573867 UPP2O95045 317 aa31.05■■■□□ 2.56
SCARF1-207ENST00000573867 LYPLA2O95372 231 aa31.05■■■□□ 2.56
SCARF1-207ENST00000573867 SPATA31C1P0DKV0 1188 aa31.05■■■□□ 2.56
SCARF1-207ENST00000573867 NEK9Q8TD19 979 aa31.05■■■□□ 2.56
SCARF1-207ENST00000573867 DHX33Q9H6R0 707 aaKnown RBP31.05■■■□□ 2.56
SCARF1-207ENST00000573867 CERS4Q9HA82 394 aa31.05■■■□□ 2.56
SCARF1-207ENST00000573867 EIF4ENIF1Q9NRA8 985 aaKnown RBP31.05■■■□□ 2.56
SCARF1-207ENST00000573867 ARID2Q68CP9 1835 aa31.04■■■□□ 2.56
SCARF1-207ENST00000573867 K7ELQ4 463 aaPredicted RBP31.04■■■□□ 2.56
SCARF1-207ENST00000573867 MED24O75448 989 aa31.04■■■□□ 2.56
SCARF1-207ENST00000573867 NFX1Q12986 1120 aaKnown RBP31.04■■■□□ 2.56
SCARF1-207ENST00000573867 PTGDRQ13258 359 aa31.04■■■□□ 2.56
SCARF1-207ENST00000573867 BMP2KQ9NSY1 1161 aaPredicted RBP31.04■■■□□ 2.56
SCARF1-207ENST00000573867 ST3GAL5Q9UNP4 418 aa31.04■■■□□ 2.56
SCARF1-207ENST00000573867 EPOPA6NHQ4 379 aa31.03■■■□□ 2.56
SCARF1-207ENST00000573867 ADGRE1Q14246 886 aa31.02■■■□□ 2.56
SCARF1-207ENST00000573867 IL17AQ16552 155 aa31.02■■■□□ 2.56
SCARF1-207ENST00000573867 XKR9Q5GH70 373 aa31.02■■■□□ 2.56
SCARF1-207ENST00000573867 CATSPER3Q86XQ3 398 aa31.02■■■□□ 2.56
SCARF1-207ENST00000573867 CRIPAKQ8N1N5 446 aa31.02■■■□□ 2.56
SCARF1-207ENST00000573867 FTHL17Q9BXU8 183 aa31.02■■■□□ 2.56
SCARF1-207ENST00000573867 TSPYL2Q9H2G4 693 aaPredicted RBP31.02■■■□□ 2.56
SCARF1-207ENST00000573867 FOXD4L1Q9NU39 408 aa31.02■■■□□ 2.56
SCARF1-207ENST00000573867 SUCLA2Q9P2R7 463 aaPredicted RBP31.02■■■□□ 2.56
SCARF1-207ENST00000573867 COL4A6Q14031 1691 aa31.02■■■□□ 2.56
SCARF1-207ENST00000573867 LINC01553A4QN01 128 aa31.01■■■□□ 2.55
SCARF1-207ENST00000573867 FXR2P51116 673 aaKnown RBP eCLIP31.01■■■□□ 2.55
SCARF1-207ENST00000573867 OTUD6AQ7L8S5 288 aa31.01■■■□□ 2.55
SCARF1-207ENST00000573867 KSR1Q8IVT5 923 aa31.01■■■□□ 2.55
SCARF1-207ENST00000573867 SP7Q8TDD2 431 aaPredicted RBP31.01■■■□□ 2.55
SCARF1-207ENST00000573867 PIGOQ8TEQ8 1089 aa31.01■■■□□ 2.55
SCARF1-207ENST00000573867 SNX21Q969T3 373 aa31.01■■■□□ 2.55
SCARF1-207ENST00000573867 PPME1Q9Y570 386 aa31.01■■■□□ 2.55
SCARF1-207ENST00000573867 INSL6Q9Y581 213 aa31.01■■■□□ 2.55
SCARF1-207ENST00000573867 TRANK1O15050 2925 aa31.01■■■□□ 2.55
SCARF1-207ENST00000573867 RFXAPO00287 272 aa31■■■□□ 2.55
SCARF1-207ENST00000573867 CSDE1O75534 798 aaKnown RBP31■■■□□ 2.55
SCARF1-207ENST00000573867 DARSP14868 501 aaKnown RBP31■■■□□ 2.55
SCARF1-207ENST00000573867 FOSL2P15408 326 aa31■■■□□ 2.55
SCARF1-207ENST00000573867 EIF4BP23588 611 aaKnown RBP31■■■□□ 2.55
SCARF1-207ENST00000573867 POLGP54098 1239 aaPredicted RBP31■■■□□ 2.55
SCARF1-207ENST00000573867 RILPL1Q5EBL4 403 aa31■■■□□ 2.55
SCARF1-207ENST00000573867 TMEM143Q96AN5 459 aa31■■■□□ 2.55
SCARF1-207ENST00000573867 INTS4Q96HW7 963 aaKnown RBP31■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms