RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 IGKV6-21A0A0C4DH24 114 aa19.64■□□□□ 0.73
SMG6-214ENST00000573827 TMEM150BA6NC51 233 aa19.64■□□□□ 0.73
SMG6-214ENST00000573827 CRYBB1P53674 252 aaPredicted RBP19.64■□□□□ 0.73
SMG6-214ENST00000573827 PPP2R5CQ13362 524 aa19.64■□□□□ 0.73
SMG6-214ENST00000573827 DSC3Q14574 896 aa19.64■□□□□ 0.73
SMG6-214ENST00000573827 FAM43BQ6ZT52 329 aaPredicted RBP19.64■□□□□ 0.73
SMG6-214ENST00000573827 PIK3AP1Q6ZUJ8 805 aa19.64■□□□□ 0.73
SMG6-214ENST00000573827 MIER3Q7Z3K6 550 aa19.64■□□□□ 0.73
SMG6-214ENST00000573827 NPAS4Q8IUM7 802 aa19.64■□□□□ 0.73
SMG6-214ENST00000573827 LRRC71Q8N4P6 559 aa19.64■□□□□ 0.73
SMG6-214ENST00000573827 FIBCD1Q8N539 461 aa19.64■□□□□ 0.73
SMG6-214ENST00000573827 SYMPKQ92797 1274 aaKnown RBP19.64■□□□□ 0.73
SMG6-214ENST00000573827 OSMRQ99650 979 aa19.64■□□□□ 0.73
SMG6-214ENST00000573827 ST3GAL5Q9UNP4 418 aa19.64■□□□□ 0.73
SMG6-214ENST00000573827 ATG2AQ2TAZ0 1938 aa19.63■□□□□ 0.73
SMG6-214ENST00000573827 CCDC194A0A1B0GVG4 234 aa19.63■□□□□ 0.73
SMG6-214ENST00000573827 RPS6KA5O75582 802 aa19.63■□□□□ 0.73
SMG6-214ENST00000573827 BMPR1AP36894 532 aa19.63■□□□□ 0.73
SMG6-214ENST00000573827 SPIRE1Q08AE8 756 aa19.63■□□□□ 0.73
SMG6-214ENST00000573827 DRP2Q13474 957 aa19.63■□□□□ 0.73
SMG6-214ENST00000573827 EFCAB12Q6NXP0 572 aa19.63■□□□□ 0.73
SMG6-214ENST00000573827 METTL13Q8N6R0 699 aa19.63■□□□□ 0.73
SMG6-214ENST00000573827 MRPL38Q96DV4 380 aaKnown RBP19.63■□□□□ 0.73
SMG6-214ENST00000573827 PPP1R16BQ96T49 567 aa19.63■□□□□ 0.73
SMG6-214ENST00000573827 NRBP2Q9NSY0 501 aa19.63■□□□□ 0.73
SMG6-214ENST00000573827 COG5Q9UP83 839 aa19.63■□□□□ 0.73
SMG6-214ENST00000573827 GINS2Q9Y248 185 aa19.63■□□□□ 0.73
SMG6-214ENST00000573827 C5orf42Q9H799 3197 aa19.62■□□□□ 0.73
SMG6-214ENST00000573827 C9IYK1 514 aa19.62■□□□□ 0.73
SMG6-214ENST00000573827 WNT7AO00755 349 aa19.62■□□□□ 0.73
SMG6-214ENST00000573827 EIF5BO60841 1220 aaKnown RBP19.62■□□□□ 0.73
SMG6-214ENST00000573827 GCFC2P16383 781 aaKnown RBP19.62■□□□□ 0.73
SMG6-214ENST00000573827 XBP1P17861 261 aa19.62■□□□□ 0.73
SMG6-214ENST00000573827 GATMP50440 423 aa19.62■□□□□ 0.73
SMG6-214ENST00000573827 KCNQ1P51787 676 aa19.62■□□□□ 0.73
SMG6-214ENST00000573827 FAM189BP81408 668 aa19.62■□□□□ 0.73
SMG6-214ENST00000573827 GPM6BQ13491 265 aa19.62■□□□□ 0.73
SMG6-214ENST00000573827 COL19A1Q14993 1142 aa19.62■□□□□ 0.73
SMG6-214ENST00000573827 XKR3Q5GH77 459 aa19.62■□□□□ 0.73
SMG6-214ENST00000573827 ANO5Q75V66 913 aa19.62■□□□□ 0.73
SMG6-214ENST00000573827 WASF1Q92558 559 aa19.62■□□□□ 0.73
SMG6-214ENST00000573827 FAM20AQ96MK3 541 aa19.62■□□□□ 0.73
SMG6-214ENST00000573827 RGS18Q9NS28 235 aa19.62■□□□□ 0.73
SMG6-214ENST00000573827 WRAP73Q9P2S5 460 aaPredicted RBP19.62■□□□□ 0.73
SMG6-214ENST00000573827 MRPL42Q9Y6G3 142 aaKnown RBP19.62■□□□□ 0.73
SMG6-214ENST00000573827 TCF20Q9UGU0 1960 aaKnown RBP19.61■□□□□ 0.73
SMG6-214ENST00000573827 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.61■□□□□ 0.73
SMG6-214ENST00000573827 TBX3O15119 743 aa19.61■□□□□ 0.73
SMG6-214ENST00000573827 RB1P06400 928 aa19.61■□□□□ 0.73
SMG6-214ENST00000573827 SARSP49591 514 aaKnown RBP19.61■□□□□ 0.73
SMG6-214ENST00000573827 NLRP11P59045 1033 aaKnown RBP19.61■□□□□ 0.73
SMG6-214ENST00000573827 NFX1Q12986 1120 aaKnown RBP19.61■□□□□ 0.73
SMG6-214ENST00000573827 CAMK1Q14012 370 aa19.61■□□□□ 0.73
SMG6-214ENST00000573827 POTEDQ86YR6 584 aa19.61■□□□□ 0.73
SMG6-214ENST00000573827 CMTR2Q8IYT2 770 aaKnown RBP19.61■□□□□ 0.73
SMG6-214ENST00000573827 ADAMTS19Q8TE59 1207 aa19.61■□□□□ 0.73
SMG6-214ENST00000573827 GRM6O15303 877 aa19.6■□□□□ 0.73
SMG6-214ENST00000573827 MMP1P03956 469 aa19.6■□□□□ 0.73
SMG6-214ENST00000573827 CTNNB1P35222 781 aa19.6■□□□□ 0.73
SMG6-214ENST00000573827 KRT2P35908 639 aa19.6■□□□□ 0.73
SMG6-214ENST00000573827 GPC3P51654 580 aa19.6■□□□□ 0.73
SMG6-214ENST00000573827 BTG3Q14201 252 aaPredicted RBP19.6■□□□□ 0.73
SMG6-214ENST00000573827 SKIV2LQ15477 1246 aaKnown RBP19.6■□□□□ 0.73
SMG6-214ENST00000573827 BANK1Q8NDB2 785 aa19.6■□□□□ 0.73
SMG6-214ENST00000573827 HLA-CQ95604 372 aa19.6■□□□□ 0.73
SMG6-214ENST00000573827 ADAM2Q99965 735 aa19.6■□□□□ 0.73
SMG6-214ENST00000573827 SH2D3AQ9BRG2 576 aa19.6■□□□□ 0.73
SMG6-214ENST00000573827 KIAA1671Q9BY89 1806 aa19.6■□□□□ 0.73
SMG6-214ENST00000573827 BTBD18B2RXH4 712 aa19.59■□□□□ 0.73
SMG6-214ENST00000573827 GPR182O15218 404 aa19.59■□□□□ 0.73
SMG6-214ENST00000573827 CCNT1O60563 726 aaKnown RBP19.59■□□□□ 0.73
SMG6-214ENST00000573827 EIF4BP23588 611 aaKnown RBP19.59■□□□□ 0.73
SMG6-214ENST00000573827 PSMC5P62195 406 aa19.59■□□□□ 0.73
SMG6-214ENST00000573827 TBC1D8BQ0IIM8 1120 aa19.59■□□□□ 0.73
SMG6-214ENST00000573827 SLC24A5Q71RS6 500 aa19.59■□□□□ 0.73
SMG6-214ENST00000573827 ZNF710Q8N1W2 664 aa19.59■□□□□ 0.73
SMG6-214ENST00000573827 MAP7D2Q96T17 732 aa19.59■□□□□ 0.73
SMG6-214ENST00000573827 C1orf112Q9NSG2 853 aa19.59■□□□□ 0.73
SMG6-214ENST00000573827 RNF19AQ9NV58 838 aa19.59■□□□□ 0.73
SMG6-214ENST00000573827 SEPT9Q9UHD8 586 aaPredicted RBP19.59■□□□□ 0.73
SMG6-214ENST00000573827 AKT3Q9Y243 479 aa19.59■□□□□ 0.73
SMG6-214ENST00000573827 FNDC1Q4ZHG4 1894 aaPredicted RBP19.58■□□□□ 0.73
SMG6-214ENST00000573827 MAFO75444 373 aaPredicted RBP19.58■□□□□ 0.72
SMG6-214ENST00000573827 STAG3L1P0CL83 205 aa19.58■□□□□ 0.72
SMG6-214ENST00000573827 DARSP14868 501 aaKnown RBP19.58■□□□□ 0.72
SMG6-214ENST00000573827 TMOD1P28289 359 aa19.58■□□□□ 0.72
SMG6-214ENST00000573827 MTERF2Q49AM1 385 aa19.58■□□□□ 0.72
SMG6-214ENST00000573827 DIS3L2Q8IYB7 885 aaKnown RBP19.58■□□□□ 0.72
SMG6-214ENST00000573827 ZNF579Q8NAF0 562 aaKnown RBP19.58■□□□□ 0.72
SMG6-214ENST00000573827 ZNF668Q96K58 619 aaPredicted RBP19.58■□□□□ 0.72
SMG6-214ENST00000573827 NECAB3Q96P71 396 aaPredicted RBP19.58■□□□□ 0.72
SMG6-214ENST00000573827 PLVAPQ9BX97 442 aa19.58■□□□□ 0.72
SMG6-214ENST00000573827 LIMCH1Q9UPQ0 1083 aa19.58■□□□□ 0.72
SMG6-214ENST00000573827 RWDD3Q9Y3V2 267 aa19.58■□□□□ 0.72
SMG6-214ENST00000573827 TRIOO75962 3097 aa19.57■□□□□ 0.72
SMG6-214ENST00000573827 DNAJB1P25685 340 aa19.57■□□□□ 0.72
SMG6-214ENST00000573827 QARSP47897 775 aaKnown RBP19.57■□□□□ 0.72
SMG6-214ENST00000573827 PTPROQ16827 1216 aa19.57■□□□□ 0.72
SMG6-214ENST00000573827 AAK1Q2M2I8 961 aa19.57■□□□□ 0.72
SMG6-214ENST00000573827 TIGD5Q53EQ6 642 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms