RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 CRYBB1P53674 252 aaPredicted RBP10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 MTERF2Q49AM1 385 aa10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 SPOUT1Q5T280 376 aaKnown RBP10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 MOXD1Q6UVY6 613 aa10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 PIK3AP1Q6ZUJ8 805 aa10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 NEK8Q86SG6 692 aa10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 CMTR2Q8IYT2 770 aaKnown RBP10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 BANK1Q8NDB2 785 aa10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 RDM1Q8NG50 284 aa10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 TMEM40Q8WWA1 233 aa10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 ZNF689Q96CS4 500 aaPredicted RBP10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 ZNF668Q96K58 619 aaPredicted RBP10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 ADAM2Q99965 735 aa10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 PHF20Q9BVI0 1012 aa10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 TMX1Q9H3N1 280 aa10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 NSUN3Q9H649 340 aaKnown RBP10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 CDHR5Q9HBB8 845 aa10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 RC3H2Q9HBD1 1191 aaKnown RBP10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 BRMS1Q9HCU9 246 aa10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 ERVK-5Q9HDB9 667 aa10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 RNF216Q9NWF9 866 aaPredicted RBP10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 ST3GAL5Q9UNP4 418 aa10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 PCDHB7Q9Y5E2 793 aa10.87□□□□□ -0.67
NPLOC4-212ENST00000573328 C5orf67F2Z3F1 127 aa10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 SLC37A4O43826 429 aa10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 EDIL3O43854 480 aa10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 ZNF862O60290 1169 aa10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 MGEA5O60502 916 aa10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 CCNT1O60563 726 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 PSMD10O75832 226 aa10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 RB1P06400 928 aa10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 BMP1P13497 986 aa10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 BMPR1AP36894 532 aa10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 GATMP50440 423 aa10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 NEK4P51957 841 aa10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 FOSBP53539 338 aa10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 NLRP11P59045 1033 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 NPY5RQ15761 445 aa10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 TCEAL5Q5H9L2 206 aa10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 RTN4RL1Q86UN2 441 aaPredicted RBP10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 FAM228AQ86W67 206 aa10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 NECAB1Q8N987 351 aa10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 NLRP7Q8WX94 980 aa10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 CLP1Q92989 425 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 C1orf112Q9NSG2 853 aa10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 GJB4Q9NTQ9 266 aa10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 MRPL42Q9Y6G3 142 aaKnown RBP10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 MUC3AQ02505 3323 aa10.86□□□□□ -0.67
NPLOC4-212ENST00000573328 CYP3A7-CYP3A51PA0A087WV96 503 aa10.85□□□□□ -0.67
NPLOC4-212ENST00000573328 TBKBP1A7MCY6 615 aa10.85□□□□□ -0.67
NPLOC4-212ENST00000573328 GRM6O15303 877 aa10.85□□□□□ -0.67
NPLOC4-212ENST00000573328 GPR32O75388 356 aa10.85□□□□□ -0.67
NPLOC4-212ENST00000573328 LARGE1O95461 756 aa10.85□□□□□ -0.67
NPLOC4-212ENST00000573328 GCFC2P16383 781 aaKnown RBP10.85□□□□□ -0.67
NPLOC4-212ENST00000573328 ZSCAN20P17040 1043 aaPredicted RBP10.85□□□□□ -0.67
NPLOC4-212ENST00000573328 CYP3A7P24462 503 aa10.85□□□□□ -0.67
NPLOC4-212ENST00000573328 KRT2P35908 639 aa10.85□□□□□ -0.67
NPLOC4-212ENST00000573328 TRIM29Q14134 588 aa10.85□□□□□ -0.67
NPLOC4-212ENST00000573328 XKR3Q5GH77 459 aa10.85□□□□□ -0.67
NPLOC4-212ENST00000573328 SLC24A5Q71RS6 500 aa10.85□□□□□ -0.67
NPLOC4-212ENST00000573328 ETNPPLQ8TBG4 499 aa10.85□□□□□ -0.67
NPLOC4-212ENST00000573328 OXER1Q8TDS5 423 aa10.85□□□□□ -0.67
NPLOC4-212ENST00000573328 GTF3C6Q969F1 213 aa10.85□□□□□ -0.67
NPLOC4-212ENST00000573328 NAP1L4Q99733 375 aaKnown RBP10.85□□□□□ -0.67
NPLOC4-212ENST00000573328 SH2D3AQ9BRG2 576 aa10.85□□□□□ -0.67
NPLOC4-212ENST00000573328 PLVAPQ9BX97 442 aa10.85□□□□□ -0.67
NPLOC4-212ENST00000573328 LMAN2LQ9H0V9 348 aa10.85□□□□□ -0.67
NPLOC4-212ENST00000573328 ALG13Q9NP73 1137 aaKnown RBP10.85□□□□□ -0.67
NPLOC4-212ENST00000573328 CLDND1Q9NY35 253 aa10.85□□□□□ -0.67
NPLOC4-212ENST00000573328 TMEM150BA6NC51 233 aa10.84□□□□□ -0.67
NPLOC4-212ENST00000573328 DDX11L8A8MPP1 907 aa10.84□□□□□ -0.67
NPLOC4-212ENST00000573328 CTDNEP1O95476 244 aa10.84□□□□□ -0.67
NPLOC4-212ENST00000573328 DNM2P50570 870 aa10.84□□□□□ -0.67
NPLOC4-212ENST00000573328 GPC3P51654 580 aa10.84□□□□□ -0.67
NPLOC4-212ENST00000573328 ME3Q16798 604 aa10.84□□□□□ -0.67
NPLOC4-212ENST00000573328 NCAPH2Q6IBW4 605 aa10.84□□□□□ -0.67
NPLOC4-212ENST00000573328 POTEDQ86YR6 584 aa10.84□□□□□ -0.67
NPLOC4-212ENST00000573328 RNF169Q8NCN4 708 aa10.84□□□□□ -0.67
NPLOC4-212ENST00000573328 PPP2R3CQ969Q6 453 aa10.84□□□□□ -0.67
NPLOC4-212ENST00000573328 MBOAT7Q96N66 472 aa10.84□□□□□ -0.67
NPLOC4-212ENST00000573328 ATP6V0A4Q9HBG4 840 aa10.84□□□□□ -0.67
NPLOC4-212ENST00000573328 RGS18Q9NS28 235 aa10.84□□□□□ -0.67
NPLOC4-212ENST00000573328 C9IYK1 514 aa10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 H3BQ06 376 aaPredicted RBP10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 DKC1O60832 514 aaKnown RBP eCLIP10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 BAG4O95429 457 aaKnown RBP10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 MMP1P03956 469 aa10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 LINC00271P0C7V0 271 aa10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 EIF4BP23588 611 aaKnown RBP10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 PSMC5P62195 406 aa10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 NR5A1Q13285 461 aa10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 LEXMQ3ZCV2 418 aa10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 FAM102BQ5T8I3 360 aa10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 PLA2G4FQ68DD2 849 aa10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 PPP4R3AQ6IN85 833 aa10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 PTCRAQ6ISU1 281 aaPredicted RBP10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 FAM43BQ6ZT52 329 aaPredicted RBP10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 ABI1Q8IZP0 508 aa10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 ZNF710Q8N1W2 664 aa10.83□□□□□ -0.68
NPLOC4-212ENST00000573328 LINC01465Q8N7H1 131 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms