RNA–Protein interactions for RNA: ENST00000573270.1

LINC01996-201, Transcript of long intergenic non-protein coding RNA 1996, humanhuman

TSL 1 (best) BASIC

Gene LINC01996, Length 1,273 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01996-201ENST00000573270 HOXC8P31273 242 aa15.02■□□□□ -0
LINC01996-201ENST00000573270 RFC5P40937 340 aa15.02■□□□□ -0
LINC01996-201ENST00000573270 CLCN3P51790 818 aa15.02■□□□□ -0
LINC01996-201ENST00000573270 SOX10P56693 466 aa15.02■□□□□ -0
LINC01996-201ENST00000573270 GDF6Q6KF10 455 aaPredicted RBP15.02■□□□□ -0
LINC01996-201ENST00000573270 SV2BQ7L1I2 683 aa15.02■□□□□ -0
LINC01996-201ENST00000573270 PAGE5Q96GU1 130 aa15.02■□□□□ -0
LINC01996-201ENST00000573270 CLSTN2Q9H4D0 955 aa15.02■□□□□ -0
LINC01996-201ENST00000573270 C11orf49Q9H6J7 331 aa15.02■□□□□ -0
LINC01996-201ENST00000573270 KBTBD4Q9NVX7 518 aa15.02■□□□□ -0
LINC01996-201ENST00000573270 KIAA0100Q14667 2235 aaKnown RBP15.02□□□□□ -0.01
LINC01996-201ENST00000573270 NRCAMQ92823 1304 aa15.01□□□□□ -0.01
LINC01996-201ENST00000573270 RSPH10B2B2RC85 870 aa15.01□□□□□ -0.01
LINC01996-201ENST00000573270 KRT18P05783 430 aaKnown RBP15.01□□□□□ -0.01
LINC01996-201ENST00000573270 RSPH10BP0C881 870 aa15.01□□□□□ -0.01
LINC01996-201ENST00000573270 COL6A1P12109 1028 aa15.01□□□□□ -0.01
LINC01996-201ENST00000573270 XRCC6P12956 609 aaKnown RBP eCLIP15.01□□□□□ -0.01
LINC01996-201ENST00000573270 CAPN2P17655 700 aa15.01□□□□□ -0.01
LINC01996-201ENST00000573270 EN2P19622 333 aaPredicted RBP15.01□□□□□ -0.01
LINC01996-201ENST00000573270 ATN1P54259 1190 aaPredicted RBP15.01□□□□□ -0.01
LINC01996-201ENST00000573270 ARSHQ5FYA8 562 aa15.01□□□□□ -0.01
LINC01996-201ENST00000573270 MARCH8Q5T0T0 291 aa15.01□□□□□ -0.01
LINC01996-201ENST00000573270 RINT1Q6NUQ1 792 aa15.01□□□□□ -0.01
LINC01996-201ENST00000573270 NFRKBQ6P4R8 1299 aa15.01□□□□□ -0.01
LINC01996-201ENST00000573270 MTHFD1LQ6UB35 978 aa15.01□□□□□ -0.01
LINC01996-201ENST00000573270 RUFY4Q6ZNE9 571 aa15.01□□□□□ -0.01
LINC01996-201ENST00000573270 MAEAQ7L5Y9 396 aa15.01□□□□□ -0.01
LINC01996-201ENST00000573270 DYMQ7RTS9 669 aa15.01□□□□□ -0.01
LINC01996-201ENST00000573270 SH3RF1Q7Z6J0 888 aa15.01□□□□□ -0.01
LINC01996-201ENST00000573270 SESTD1Q86VW0 696 aa15.01□□□□□ -0.01
LINC01996-201ENST00000573270 LRRC71Q8N4P6 559 aa15.01□□□□□ -0.01
LINC01996-201ENST00000573270 SLC7A3Q8WY07 619 aa15.01□□□□□ -0.01
LINC01996-201ENST00000573270 ERCC4Q92889 916 aaPredicted RBP15.01□□□□□ -0.01
LINC01996-201ENST00000573270 REEP2Q9BRK0 252 aa15.01□□□□□ -0.01
LINC01996-201ENST00000573270 TRIM9Q9C026 710 aa15.01□□□□□ -0.01
LINC01996-201ENST00000573270 SENP6Q9GZR1 1112 aaPredicted RBP15.01□□□□□ -0.01
LINC01996-201ENST00000573270 POLR3FQ9H1D9 316 aaPredicted RBP15.01□□□□□ -0.01
LINC01996-201ENST00000573270 NUP62CLQ9H1M0 184 aa15.01□□□□□ -0.01
LINC01996-201ENST00000573270 DHX33Q9H6R0 707 aaKnown RBP15.01□□□□□ -0.01
LINC01996-201ENST00000573270 GPRC5CQ9NQ84 441 aa15.01□□□□□ -0.01
LINC01996-201ENST00000573270 RRN3P2A6NIE6 340 aa15□□□□□ -0.01
LINC01996-201ENST00000573270 TREHO43280 583 aa15□□□□□ -0.01
LINC01996-201ENST00000573270 HIP1RO75146 1068 aa15□□□□□ -0.01
LINC01996-201ENST00000573270 DGAT1O75907 488 aa15□□□□□ -0.01
LINC01996-201ENST00000573270 ASIC1P78348 528 aa15□□□□□ -0.01
LINC01996-201ENST00000573270 ADAM17P78536 824 aa15□□□□□ -0.01
LINC01996-201ENST00000573270 MAPK7Q13164 816 aa15□□□□□ -0.01
LINC01996-201ENST00000573270 DRP2Q13474 957 aa15□□□□□ -0.01
LINC01996-201ENST00000573270 PNOCQ13519 176 aa15□□□□□ -0.01
LINC01996-201ENST00000573270 CUL4BQ13620 913 aa15□□□□□ -0.01
LINC01996-201ENST00000573270 POSTNQ15063 836 aa15□□□□□ -0.01
LINC01996-201ENST00000573270 CAMK4Q16566 473 aa15□□□□□ -0.01
LINC01996-201ENST00000573270 C1orf186Q6ZWK4 172 aa15□□□□□ -0.01
LINC01996-201ENST00000573270 SLC43A3Q8NBI5 491 aa15□□□□□ -0.01
LINC01996-201ENST00000573270 DDX12PQ92771 950 aa15□□□□□ -0.01
LINC01996-201ENST00000573270 PAWRQ96IZ0 340 aaKnown RBP15□□□□□ -0.01
LINC01996-201ENST00000573270 TIGD1Q96MW7 591 aa15□□□□□ -0.01
LINC01996-201ENST00000573270 POLD4Q9HCU8 107 aa15□□□□□ -0.01
LINC01996-201ENST00000573270 TRMT13Q9NUP7 481 aaKnown RBP15□□□□□ -0.01
LINC01996-201ENST00000573270 PPME1Q9Y570 386 aa15□□□□□ -0.01
LINC01996-201ENST00000573270 MBLAC1A4D2B0 266 aaPredicted RBP14.99□□□□□ -0.01
LINC01996-201ENST00000573270 CCDC85CA6NKD9 419 aa14.99□□□□□ -0.01
LINC01996-201ENST00000573270 ARVCFO00192 962 aa14.99□□□□□ -0.01
LINC01996-201ENST00000573270 GTPBP6O43824 516 aaPredicted RBP14.99□□□□□ -0.01
LINC01996-201ENST00000573270 TBCAO75347 108 aaKnown RBP14.99□□□□□ -0.01
LINC01996-201ENST00000573270 MAFO75444 373 aaPredicted RBP14.99□□□□□ -0.01
LINC01996-201ENST00000573270 CYP2C9P11712 490 aa14.99□□□□□ -0.01
LINC01996-201ENST00000573270 GUCY2CP25092 1073 aa14.99□□□□□ -0.01
LINC01996-201ENST00000573270 KLRC1P26715 233 aa14.99□□□□□ -0.01
LINC01996-201ENST00000573270 KLHL40Q2TBA0 621 aa14.99□□□□□ -0.01
LINC01996-201ENST00000573270 TRIM60Q495X7 471 aa14.99□□□□□ -0.01
LINC01996-201ENST00000573270 FAM102BQ5T8I3 360 aa14.99□□□□□ -0.01
LINC01996-201ENST00000573270 CAVIN1Q6NZI2 390 aaKnown RBP14.99□□□□□ -0.01
LINC01996-201ENST00000573270 DAW1Q8N136 415 aa14.99□□□□□ -0.01
LINC01996-201ENST00000573270 LINC01465Q8N7H1 131 aa14.99□□□□□ -0.01
LINC01996-201ENST00000573270 MCPH1Q8NEM0 835 aa14.99□□□□□ -0.01
LINC01996-201ENST00000573270 WNT8BQ93098 351 aa14.99□□□□□ -0.01
LINC01996-201ENST00000573270 TMEM143Q96AN5 459 aa14.99□□□□□ -0.01
LINC01996-201ENST00000573270 CTAGE1Q96RT6 745 aa14.99□□□□□ -0.01
LINC01996-201ENST00000573270 PPP1R16BQ96T49 567 aa14.99□□□□□ -0.01
LINC01996-201ENST00000573270 FAM49AQ9H0Q0 323 aaPredicted RBP14.99□□□□□ -0.01
LINC01996-201ENST00000573270 TMEM63CQ9P1W3 806 aa14.99□□□□□ -0.01
LINC01996-201ENST00000573270 IGKV6-21A0A0C4DH24 114 aa14.98□□□□□ -0.01
LINC01996-201ENST00000573270 B4GALT4O60513 344 aa14.98□□□□□ -0.01
LINC01996-201ENST00000573270 PQBP1O60828 265 aaKnown RBP14.98□□□□□ -0.01
LINC01996-201ENST00000573270 GNAT1P11488 350 aa14.98□□□□□ -0.01
LINC01996-201ENST00000573270 IDEP14735 1019 aa14.98□□□□□ -0.01
LINC01996-201ENST00000573270 AMPD3Q01432 767 aa14.98□□□□□ -0.01
LINC01996-201ENST00000573270 PTPN11Q06124 597 aaPredicted RBP14.98□□□□□ -0.01
LINC01996-201ENST00000573270 DPYDQ12882 1025 aa14.98□□□□□ -0.01
LINC01996-201ENST00000573270 MKRN4PQ13434 485 aaPredicted RBP14.98□□□□□ -0.01
LINC01996-201ENST00000573270 GIT2Q14161 759 aa14.98□□□□□ -0.01
LINC01996-201ENST00000573270 CCDC183Q5T5S1 534 aa14.98□□□□□ -0.01
LINC01996-201ENST00000573270 EFCAB12Q6NXP0 572 aa14.98□□□□□ -0.01
LINC01996-201ENST00000573270 METTL13Q8N6R0 699 aa14.98□□□□□ -0.01
LINC01996-201ENST00000573270 ASAP3Q8TDY4 903 aa14.98□□□□□ -0.01
LINC01996-201ENST00000573270 DNAJC19Q96DA6 116 aa14.98□□□□□ -0.01
LINC01996-201ENST00000573270 CCDC34Q96HJ3 373 aa14.98□□□□□ -0.01
LINC01996-201ENST00000573270 C7orf25Q9BPX7 421 aa14.98□□□□□ -0.01
LINC01996-201ENST00000573270 TRPV6Q9H1D0 765 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms