RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 ITGB3BPQ13352 177 aaPredicted RBP11.35□□□□□ -0.59
CHRNB1-205ENST00000573209 RASA2Q15283 850 aa11.35□□□□□ -0.59
CHRNB1-205ENST00000573209 NTRK3Q16288 839 aa11.35□□□□□ -0.59
CHRNB1-205ENST00000573209 QPCTQ16769 361 aa11.35□□□□□ -0.59
CHRNB1-205ENST00000573209 SHROOM1Q2M3G4 852 aaPredicted RBP11.35□□□□□ -0.59
CHRNB1-205ENST00000573209 FKBP15Q5T1M5 1219 aa11.35□□□□□ -0.59
CHRNB1-205ENST00000573209 DEPDC1Q5TB30 811 aa11.35□□□□□ -0.59
CHRNB1-205ENST00000573209 OLFML2BQ68BL8 750 aa11.35□□□□□ -0.59
CHRNB1-205ENST00000573209 METTL16Q86W50 562 aaKnown RBP11.35□□□□□ -0.59
CHRNB1-205ENST00000573209 NUTM2AQ8IVF1 878 aaPredicted RBP11.35□□□□□ -0.59
CHRNB1-205ENST00000573209 NOC3LQ8WTT2 800 aaKnown RBP11.35□□□□□ -0.59
CHRNB1-205ENST00000573209 RTFDC1Q9BY42 306 aaPredicted RBP11.35□□□□□ -0.59
CHRNB1-205ENST00000573209 GBA3Q9H227 469 aa11.35□□□□□ -0.59
CHRNB1-205ENST00000573209 ETNK2Q9NVF9 386 aa11.35□□□□□ -0.59
CHRNB1-205ENST00000573209 LAMB2P55268 1798 aa11.35□□□□□ -0.59
CHRNB1-205ENST00000573209 DLEC1Q9Y238 1755 aa11.35□□□□□ -0.59
CHRNB1-205ENST00000573209 TNFRSF10AO00220 468 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 SPTLC1O15269 473 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 ASMTLO95671 621 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 UQCRFS1P1P0C7P4 283 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 KCNA3P22001 575 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 GUCY2DQ02846 1103 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 PNOCQ13519 176 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 KIF22Q14807 665 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 TRIM71Q2Q1W2 868 aaKnown RBP11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 SH3D19Q5HYK7 790 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 SLC9C2Q5TAH2 1124 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 NCAPH2Q6IBW4 605 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 PHLDB2Q86SQ0 1253 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 TC2NQ8N9U0 490 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 CFAP61Q8NHU2 1237 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 IFT74Q96LB3 600 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 LY9Q9HBG7 655 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 SAMSN1Q9NSI8 373 aaKnown RBP11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 FANCLQ9NW38 375 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 FKBP14Q9NWM8 211 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 NDUFA13Q9P0J0 144 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 BTBD7Q9P203 1132 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 KCNH3Q9ULD8 1083 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 COL16A1Q07092 1604 aaPredicted RBP11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 AFF2P51816 1311 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 MATN2O00339 956 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 MAP3K7O43318 606 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 SERPINB7O75635 380 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 FBXO21O94952 628 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 LDHBP07195 334 aaKnown RBP11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 CDC27P30260 824 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 PHLDB3Q6NSJ2 640 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 PTF1AQ7RTS3 328 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 IGDCC4Q8TDY8 1250 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 AIFM3Q96NN9 605 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 ZIM3Q96PE6 472 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 CNNM2Q9H8M5 875 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 IGSF5Q9NSI5 407 aa11.34□□□□□ -0.59
CHRNB1-205ENST00000573209 LINC00854A0A1B0GVQ3 168 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 IL2RBP14784 551 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 CCNCP24863 283 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 RCAN1P53805 252 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 SSRP1Q08945 709 aaKnown RBP11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 NT5DC1Q5TFE4 455 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 TRAPPC11Q7Z392 1133 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 MICU3Q86XE3 530 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 NOSTRINQ8IVI9 506 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 PLPP6Q8IY26 295 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 VGLL2Q8N8G2 317 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 DPF2Q92785 391 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 PHLPP1O60346 1717 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 ANKRD62A6NC57 917 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 B4E1Z4 1266 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 RANBP6O60518 1105 aaKnown RBP11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 PDE6AP16499 860 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 IFNAR1P17181 557 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 CALB2P22676 271 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 SLC16A2P36021 539 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 CCNFP41002 786 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 MSH2P43246 934 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 GOLGA8FQ08AF8 430 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 GOLGA8DPQ0D2H9 430 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 CYLC2Q14093 348 aaPredicted RBP11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 CCDC14Q49A88 953 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 TMEM67Q5HYA8 995 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 PCNX4Q63HM2 1172 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 LDHAL6AQ6ZMR3 332 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 TOM1L2Q6ZVM7 507 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 MAEAQ7L5Y9 396 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 CPLX4Q7Z7G2 160 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 LSMEM2Q8N112 164 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 ZNF579Q8NAF0 562 aaKnown RBP11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 PRCCQ92733 491 aaPredicted RBP11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 PHKBQ93100 1093 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 RRP36Q96EU6 259 aaKnown RBP11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 SPATA17Q96L03 361 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 PRPF18Q99633 342 aaKnown RBP11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 RNPEPL1Q9HAU8 725 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 USH1CQ9Y6N9 552 aa11.33□□□□□ -0.6
CHRNB1-205ENST00000573209 ZNF532Q9HCE3 1301 aa11.32□□□□□ -0.6
CHRNB1-205ENST00000573209 TCRBV5S4A2TA0A5A2 114 aa11.32□□□□□ -0.6
CHRNB1-205ENST00000573209 GOLGA8TH3BQL2 631 aa11.32□□□□□ -0.6
CHRNB1-205ENST00000573209 OXSR1O95747 527 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms