RNA–Protein interactions for RNA: ENST00000572756.5

NDE1-205, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 5

Gene NDE1, Length 915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-205ENST00000572756 CRYBB1P53674 252 aaPredicted RBP18.12■□□□□ 0.49
NDE1-205ENST00000572756 TBC1D8BQ0IIM8 1120 aa18.12■□□□□ 0.49
NDE1-205ENST00000572756 PAK2Q13177 524 aa18.12■□□□□ 0.49
NDE1-205ENST00000572756 MTERF2Q49AM1 385 aa18.12■□□□□ 0.49
NDE1-205ENST00000572756 NCAPH2Q6IBW4 605 aa18.12■□□□□ 0.49
NDE1-205ENST00000572756 CRIPAKQ8N1N5 446 aa18.12■□□□□ 0.49
NDE1-205ENST00000572756 BACH2Q9BYV9 841 aa18.12■□□□□ 0.49
NDE1-205ENST00000572756 TSPYL2Q9H2G4 693 aaPredicted RBP18.12■□□□□ 0.49
NDE1-205ENST00000572756 TMEM60Q9H2L4 133 aa18.12■□□□□ 0.49
NDE1-205ENST00000572756 ADAMTS10Q9H324 1103 aa18.12■□□□□ 0.49
NDE1-205ENST00000572756 CERS4Q9HA82 394 aa18.12■□□□□ 0.49
NDE1-205ENST00000572756 GINS2Q9Y248 185 aa18.12■□□□□ 0.49
NDE1-205ENST00000572756 NOC2LQ9Y3T9 749 aaKnown RBP18.12■□□□□ 0.49
NDE1-205ENST00000572756 REV3LO60673 3130 aa18.12■□□□□ 0.49
NDE1-205ENST00000572756 RALGAPA2Q2PPJ7 1873 aa18.12■□□□□ 0.49
NDE1-205ENST00000572756 DDX11L8A8MPP1 907 aa18.11■□□□□ 0.49
NDE1-205ENST00000572756 RFXAPO00287 272 aa18.11■□□□□ 0.49
NDE1-205ENST00000572756 UPP2O95045 317 aa18.11■□□□□ 0.49
NDE1-205ENST00000572756 POU3F3P20264 500 aaPredicted RBP18.11■□□□□ 0.49
NDE1-205ENST00000572756 U2AF2P26368 475 aaKnown RBP eCLIP18.11■□□□□ 0.49
NDE1-205ENST00000572756 ERVK-21P61565 698 aa18.11■□□□□ 0.49
NDE1-205ENST00000572756 TMEM266Q2M3C6 531 aa18.11■□□□□ 0.49
NDE1-205ENST00000572756 FAM43BQ6ZT52 329 aaPredicted RBP18.11■□□□□ 0.49
NDE1-205ENST00000572756 NOSTRINQ8IVI9 506 aa18.11■□□□□ 0.49
NDE1-205ENST00000572756 C4orf19Q8IY42 314 aa18.11■□□□□ 0.49
NDE1-205ENST00000572756 ZNF710Q8N1W2 664 aa18.11■□□□□ 0.49
NDE1-205ENST00000572756 ARNTL2Q8WYA1 636 aa18.11■□□□□ 0.49
NDE1-205ENST00000572756 MAP7D2Q96T17 732 aa18.11■□□□□ 0.49
NDE1-205ENST00000572756 PPP1R16BQ96T49 567 aa18.11■□□□□ 0.49
NDE1-205ENST00000572756 OSMRQ99650 979 aa18.11■□□□□ 0.49
NDE1-205ENST00000572756 SH2D3AQ9BRG2 576 aa18.11■□□□□ 0.49
NDE1-205ENST00000572756 LXNQ9BS40 222 aa18.11■□□□□ 0.49
NDE1-205ENST00000572756 RC3H2Q9HBD1 1191 aaKnown RBP18.11■□□□□ 0.49
NDE1-205ENST00000572756 RGL1Q9NZL6 768 aa18.11■□□□□ 0.49
NDE1-205ENST00000572756 PCDHA12Q9UN75 941 aa18.11■□□□□ 0.49
NDE1-205ENST00000572756 AKT3Q9Y243 479 aa18.11■□□□□ 0.49
NDE1-205ENST00000572756 A0A0C4DFX4 3053 aa18.1■□□□□ 0.49
NDE1-205ENST00000572756 DKC1O60832 514 aaKnown RBP eCLIP18.1■□□□□ 0.49
NDE1-205ENST00000572756 RPS6KA5O75582 802 aa18.1■□□□□ 0.49
NDE1-205ENST00000572756 GPC3P51654 580 aa18.1■□□□□ 0.49
NDE1-205ENST00000572756 NLRP11P59045 1033 aaKnown RBP18.1■□□□□ 0.49
NDE1-205ENST00000572756 DRP2Q13474 957 aa18.1■□□□□ 0.49
NDE1-205ENST00000572756 PLA2G4FQ68DD2 849 aa18.1■□□□□ 0.49
NDE1-205ENST00000572756 FAM228AQ86W67 206 aa18.1■□□□□ 0.49
NDE1-205ENST00000572756 DYDC2Q96IM9 177 aa18.1■□□□□ 0.49
NDE1-205ENST00000572756 TGS1Q96RS0 853 aaKnown RBP18.1■□□□□ 0.49
NDE1-205ENST00000572756 YME1L1Q96TA2 773 aa18.1■□□□□ 0.49
NDE1-205ENST00000572756 TTC12Q9H892 705 aaPredicted RBP18.1■□□□□ 0.49
NDE1-205ENST00000572756 SUGCTQ9HAC7 445 aa18.1■□□□□ 0.49
NDE1-205ENST00000572756 CYP26B1Q9NR63 512 aa18.1■□□□□ 0.49
NDE1-205ENST00000572756 ST3GAL5Q9UNP4 418 aa18.1■□□□□ 0.49
NDE1-205ENST00000572756 MGEA5O60502 916 aa18.09■□□□□ 0.49
NDE1-205ENST00000572756 LPXNO60711 386 aa18.09■□□□□ 0.49
NDE1-205ENST00000572756 MAFO75444 373 aaPredicted RBP18.09■□□□□ 0.49
NDE1-205ENST00000572756 ATP2B1P20020 1258 aa18.09■□□□□ 0.49
NDE1-205ENST00000572756 IGFBP4P22692 258 aa18.09■□□□□ 0.49
NDE1-205ENST00000572756 MCM7P33993 719 aa18.09■□□□□ 0.49
NDE1-205ENST00000572756 NPEPPSP55786 919 aa18.09■□□□□ 0.49
NDE1-205ENST00000572756 ORC2Q13416 577 aaPredicted RBP18.09■□□□□ 0.49
NDE1-205ENST00000572756 ZNF579Q8NAF0 562 aaKnown RBP18.09■□□□□ 0.49
NDE1-205ENST00000572756 SLC17A8Q8NDX2 589 aa18.09■□□□□ 0.49
NDE1-205ENST00000572756 ZNF689Q96CS4 500 aaPredicted RBP18.09■□□□□ 0.49
NDE1-205ENST00000572756 HSD17B14Q9BPX1 270 aa18.09■□□□□ 0.49
NDE1-205ENST00000572756 EIF2AK1Q9BQI3 630 aaKnown RBP18.09■□□□□ 0.49
NDE1-205ENST00000572756 GPR182O15218 404 aa18.08■□□□□ 0.48
NDE1-205ENST00000572756 SLITRK3O94933 977 aa18.08■□□□□ 0.48
NDE1-205ENST00000572756 TXKP42681 527 aa18.08■□□□□ 0.48
NDE1-205ENST00000572756 TRAPPC10P48553 1259 aa18.08■□□□□ 0.48
NDE1-205ENST00000572756 CYP4A11Q02928 519 aa18.08■□□□□ 0.48
NDE1-205ENST00000572756 NFX1Q12986 1120 aaKnown RBP18.08■□□□□ 0.48
NDE1-205ENST00000572756 GRB10Q13322 594 aa18.08■□□□□ 0.48
NDE1-205ENST00000572756 CTTNQ14247 550 aaKnown RBP18.08■□□□□ 0.48
NDE1-205ENST00000572756 ODR4Q5SWX8 454 aa18.08■□□□□ 0.48
NDE1-205ENST00000572756 DHX33Q9H6R0 707 aaKnown RBP18.08■□□□□ 0.48
NDE1-205ENST00000572756 ZSWIM4Q9H7M6 989 aa18.08■□□□□ 0.48
NDE1-205ENST00000572756 PPME1Q9Y570 386 aa18.08■□□□□ 0.48
NDE1-205ENST00000572756 MTCH2Q9Y6C9 303 aa18.08■□□□□ 0.48
NDE1-205ENST00000572756 FNDC1Q4ZHG4 1894 aaPredicted RBP18.07■□□□□ 0.48
NDE1-205ENST00000572756 DGKIO75912 1065 aa18.07■□□□□ 0.48
NDE1-205ENST00000572756 LYPLA2O95372 231 aa18.07■□□□□ 0.48
NDE1-205ENST00000572756 LINC00271P0C7V0 271 aa18.07■□□□□ 0.48
NDE1-205ENST00000572756 DARSP14868 501 aaKnown RBP18.07■□□□□ 0.48
NDE1-205ENST00000572756 EIF4BP23588 611 aaKnown RBP18.07■□□□□ 0.48
NDE1-205ENST00000572756 YWHABP31946 246 aaKnown RBP18.07■□□□□ 0.48
NDE1-205ENST00000572756 DSC3Q14574 896 aa18.07■□□□□ 0.48
NDE1-205ENST00000572756 ZNF174Q15697 407 aa18.07■□□□□ 0.48
NDE1-205ENST00000572756 TTC38Q5R3I4 469 aa18.07■□□□□ 0.48
NDE1-205ENST00000572756 NPAS4Q8IUM7 802 aa18.07■□□□□ 0.48
NDE1-205ENST00000572756 NEK9Q8TD19 979 aa18.07■□□□□ 0.48
NDE1-205ENST00000572756 ZNF668Q96K58 619 aaPredicted RBP18.07■□□□□ 0.48
NDE1-205ENST00000572756 C17orf80Q9BSJ5 609 aa18.07■□□□□ 0.48
NDE1-205ENST00000572756 RGS18Q9NS28 235 aa18.07■□□□□ 0.48
NDE1-205ENST00000572756 KIF3AQ9Y496 699 aa18.07■□□□□ 0.48
NDE1-205ENST00000572756 KIAA1671Q9BY89 1806 aa18.07■□□□□ 0.48
NDE1-205ENST00000572756 ADGRA3Q8IWK6 1321 aa18.06■□□□□ 0.48
NDE1-205ENST00000572756 POTEMA6NI47 508 aa18.06■□□□□ 0.48
NDE1-205ENST00000572756 ZBTB39O15060 712 aa18.06■□□□□ 0.48
NDE1-205ENST00000572756 GJB2P29033 226 aa18.06■□□□□ 0.48
NDE1-205ENST00000572756 SARSP49591 514 aaKnown RBP18.06■□□□□ 0.48
NDE1-205ENST00000572756 TOB1P50616 345 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms