RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 COL1A2P08123 1366 aa22.62■■□□□ 1.21
CCDC40-206ENST00000572083 ZBTB42B2RXF5 422 aa22.61■■□□□ 1.21
CCDC40-206ENST00000572083 VTNP04004 478 aa22.61■■□□□ 1.21
CCDC40-206ENST00000572083 NAPAP54920 295 aa22.61■■□□□ 1.21
CCDC40-206ENST00000572083 PLCB3Q01970 1234 aa22.61■■□□□ 1.21
CCDC40-206ENST00000572083 FAM160B1Q5W0V3 765 aa22.61■■□□□ 1.21
CCDC40-206ENST00000572083 ABHD15Q6UXT9 468 aa22.61■■□□□ 1.21
CCDC40-206ENST00000572083 TMTC2Q8N394 836 aa22.61■■□□□ 1.21
CCDC40-206ENST00000572083 EVPLQ92817 2033 aa22.61■■□□□ 1.21
CCDC40-206ENST00000572083 PUF60Q9UHX1 559 aaKnown RBP22.61■■□□□ 1.21
CCDC40-206ENST00000572083 SLC12A7Q9Y666 1083 aa22.61■■□□□ 1.21
CCDC40-206ENST00000572083 LIFRP42702 1097 aa22.6■■□□□ 1.21
CCDC40-206ENST00000572083 PDXDC2PQ6P474 469 aa22.6■■□□□ 1.21
CCDC40-206ENST00000572083 LRRC55Q6ZSA7 311 aa22.6■■□□□ 1.21
CCDC40-206ENST00000572083 FANCBQ8NB91 859 aa22.6■■□□□ 1.21
CCDC40-206ENST00000572083 NGRNQ9NPE2 291 aaKnown RBP22.6■■□□□ 1.21
CCDC40-206ENST00000572083 RIC8AQ9NPQ8 531 aa22.6■■□□□ 1.21
CCDC40-206ENST00000572083 ZNF302Q9NR11 478 aa22.6■■□□□ 1.21
CCDC40-206ENST00000572083 NR2E1Q9Y466 385 aa22.6■■□□□ 1.21
CCDC40-206ENST00000572083 CNTNAP5Q8WYK1 1306 aa22.59■■□□□ 1.21
CCDC40-206ENST00000572083 C2CD4DB7Z1M9 353 aa22.59■■□□□ 1.21
CCDC40-206ENST00000572083 GALR2O43603 387 aaPredicted RBP22.59■■□□□ 1.21
CCDC40-206ENST00000572083 C22orf31O95567 290 aa22.59■■□□□ 1.21
CCDC40-206ENST00000572083 HOXB8P17481 243 aaPredicted RBP22.59■■□□□ 1.21
CCDC40-206ENST00000572083 CRYBB1P53674 252 aaPredicted RBP22.59■■□□□ 1.21
CCDC40-206ENST00000572083 FAM189BP81408 668 aa22.59■■□□□ 1.21
CCDC40-206ENST00000572083 DSC3Q14574 896 aa22.59■■□□□ 1.21
CCDC40-206ENST00000572083 ZNF484Q5JVG2 852 aa22.59■■□□□ 1.21
CCDC40-206ENST00000572083 KCNT2Q6UVM3 1135 aa22.59■■□□□ 1.21
CCDC40-206ENST00000572083 TRMT1LQ7Z2T5 733 aaKnown RBP22.59■■□□□ 1.21
CCDC40-206ENST00000572083 TMC7Q7Z402 723 aa22.59■■□□□ 1.21
CCDC40-206ENST00000572083 METTL13Q8N6R0 699 aa22.59■■□□□ 1.21
CCDC40-206ENST00000572083 CASD1Q96PB1 797 aa22.59■■□□□ 1.21
CCDC40-206ENST00000572083 TMEM117Q9H0C3 514 aa22.59■■□□□ 1.21
CCDC40-206ENST00000572083 SMOC2Q9H3U7 446 aa22.59■■□□□ 1.21
CCDC40-206ENST00000572083 POMKQ9H5K3 350 aa22.59■■□□□ 1.21
CCDC40-206ENST00000572083 ELAC1Q9H777 363 aaKnown RBP22.59■■□□□ 1.21
CCDC40-206ENST00000572083 RNF19AQ9NV58 838 aa22.59■■□□□ 1.21
CCDC40-206ENST00000572083 MEIS1O00470 390 aa22.58■■□□□ 1.21
CCDC40-206ENST00000572083 BRD1O95696 1058 aa22.58■■□□□ 1.21
CCDC40-206ENST00000572083 ATP4AP20648 1035 aa22.58■■□□□ 1.21
CCDC40-206ENST00000572083 ZNF76P36508 570 aa22.58■■□□□ 1.21
CCDC40-206ENST00000572083 MTMR3Q13615 1198 aa22.58■■□□□ 1.21
CCDC40-206ENST00000572083 SWSAP1Q6NVH7 229 aa22.58■■□□□ 1.21
CCDC40-206ENST00000572083 FAM43BQ6ZT52 329 aaPredicted RBP22.58■■□□□ 1.21
CCDC40-206ENST00000572083 CKAP2LQ8IYA6 745 aa22.58■■□□□ 1.21
CCDC40-206ENST00000572083 LRRC43Q8N309 656 aa22.58■■□□□ 1.21
CCDC40-206ENST00000572083 ZNF558Q96NG5 402 aa22.58■■□□□ 1.21
CCDC40-206ENST00000572083 SORCS3Q9UPU3 1222 aa22.58■■□□□ 1.21
CCDC40-206ENST00000572083 GPR32O75388 356 aa22.57■■□□□ 1.2
CCDC40-206ENST00000572083 FOSP01100 380 aaPredicted RBP22.57■■□□□ 1.2
CCDC40-206ENST00000572083 PPM1AP35813 382 aa22.57■■□□□ 1.2
CCDC40-206ENST00000572083 SREBF1P36956 1147 aa22.57■■□□□ 1.2
CCDC40-206ENST00000572083 ADCY7P51828 1080 aa22.57■■□□□ 1.2
CCDC40-206ENST00000572083 ASCL5Q7RTU5 278 aa22.57■■□□□ 1.2
CCDC40-206ENST00000572083 TMEM105Q8N8V8 129 aa22.57■■□□□ 1.2
CCDC40-206ENST00000572083 CASP10Q92851 521 aa22.57■■□□□ 1.2
CCDC40-206ENST00000572083 HCFC2Q9Y5Z7 792 aa22.57■■□□□ 1.2
CCDC40-206ENST00000572083 CA8P35219 290 aa22.56■■□□□ 1.2
CCDC40-206ENST00000572083 CLCN3P51790 818 aa22.56■■□□□ 1.2
CCDC40-206ENST00000572083 KRT17Q04695 432 aa22.56■■□□□ 1.2
CCDC40-206ENST00000572083 TPRNQ4KMQ1 711 aa22.56■■□□□ 1.2
CCDC40-206ENST00000572083 PPP1R18Q6NYC8 613 aa22.56■■□□□ 1.2
CCDC40-206ENST00000572083 MIS18BP1Q6P0N0 1132 aa22.56■■□□□ 1.2
CCDC40-206ENST00000572083 UBALD2Q8IYN6 164 aa22.56■■□□□ 1.2
CCDC40-206ENST00000572083 ABI1Q8IZP0 508 aa22.56■■□□□ 1.2
CCDC40-206ENST00000572083 RNF169Q8NCN4 708 aa22.56■■□□□ 1.2
CCDC40-206ENST00000572083 SPTBN4Q9H254 2564 aa22.56■■□□□ 1.2
CCDC40-206ENST00000572083 DCHS1Q96JQ0 3298 aa22.56■■□□□ 1.2
CCDC40-206ENST00000572083 FAM86B1E9PN63 330 aa22.55■■□□□ 1.2
CCDC40-206ENST00000572083 SLC27A2O14975 620 aa22.55■■□□□ 1.2
CCDC40-206ENST00000572083 DHX15O43143 795 aaKnown RBP22.55■■□□□ 1.2
CCDC40-206ENST00000572083 HOXA2O43364 376 aa22.55■■□□□ 1.2
CCDC40-206ENST00000572083 WEE2P0C1S8 567 aa22.55■■□□□ 1.2
CCDC40-206ENST00000572083 FAM86B2P0C5J1 330 aa22.55■■□□□ 1.2
CCDC40-206ENST00000572083 NUBP1P53384 320 aa22.55■■□□□ 1.2
CCDC40-206ENST00000572083 SMC1AQ14683 1233 aaKnown RBP22.55■■□□□ 1.2
CCDC40-206ENST00000572083 CES5AQ6NT32 575 aa22.55■■□□□ 1.2
CCDC40-206ENST00000572083 PLA2G4DQ86XP0 818 aa22.55■■□□□ 1.2
CCDC40-206ENST00000572083 ADAM7Q9H2U9 754 aa22.55■■□□□ 1.2
CCDC40-206ENST00000572083 SPG21Q9NZD8 308 aa22.55■■□□□ 1.2
CCDC40-206ENST00000572083 SMCO2A6NFE2 343 aa22.54■■□□□ 1.2
CCDC40-206ENST00000572083 PROB1E7EW31 1015 aa22.54■■□□□ 1.2
CCDC40-206ENST00000572083 ASGR2P07307 311 aa22.54■■□□□ 1.2
CCDC40-206ENST00000572083 CLLU1OSQ5K130 101 aa22.54■■□□□ 1.2
CCDC40-206ENST00000572083 NIPA1Q7RTP0 329 aa22.54■■□□□ 1.2
CCDC40-206ENST00000572083 BBXQ8WY36 941 aaPredicted RBP22.54■■□□□ 1.2
CCDC40-206ENST00000572083 ZNF668Q96K58 619 aaPredicted RBP22.54■■□□□ 1.2
CCDC40-206ENST00000572083 NECTIN4Q96NY8 510 aa22.54■■□□□ 1.2
CCDC40-206ENST00000572083 LSG1Q9H089 658 aaKnown RBP22.54■■□□□ 1.2
CCDC40-206ENST00000572083 AKT3Q9Y243 479 aa22.54■■□□□ 1.2
CCDC40-206ENST00000572083 PRR23AA6NEV1 266 aa22.53■■□□□ 1.2
CCDC40-206ENST00000572083 C2orf71A6NGG8 1288 aa22.53■■□□□ 1.2
CCDC40-206ENST00000572083 IPO5O00410 1097 aaKnown RBP22.53■■□□□ 1.2
CCDC40-206ENST00000572083 CLK2P49760 499 aaKnown RBP22.53■■□□□ 1.2
CCDC40-206ENST00000572083 NLRP11P59045 1033 aaKnown RBP22.53■■□□□ 1.2
CCDC40-206ENST00000572083 ITIH3Q06033 890 aa22.53■■□□□ 1.2
CCDC40-206ENST00000572083 AP3B2Q13367 1082 aa22.53■■□□□ 1.2
CCDC40-206ENST00000572083 SGMS1Q86VZ5 419 aa22.53■■□□□ 1.2
CCDC40-206ENST00000572083 ECHDC2Q86YB7 292 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms