RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 RABEP1Q15276 862 aa19.97■□□□□ 0.79
CTDNEP1-207ENST00000572043 CALCRLQ16602 461 aa19.97■□□□□ 0.79
CTDNEP1-207ENST00000572043 FAM228AQ86W67 206 aa19.97■□□□□ 0.79
CTDNEP1-207ENST00000572043 LINC01465Q8N7H1 131 aa19.97■□□□□ 0.79
CTDNEP1-207ENST00000572043 FAM184AQ8NB25 1140 aa19.97■□□□□ 0.79
CTDNEP1-207ENST00000572043 FBXO22Q8NEZ5 403 aa19.97■□□□□ 0.79
CTDNEP1-207ENST00000572043 UPF2Q9HAU5 1272 aaKnown RBP19.97■□□□□ 0.79
CTDNEP1-207ENST00000572043 SH2B1Q9NRF2 756 aaPredicted RBP19.97■□□□□ 0.79
CTDNEP1-207ENST00000572043 ST3GAL5Q9UNP4 418 aa19.97■□□□□ 0.79
CTDNEP1-207ENST00000572043 SIP14410 1827 aa19.97■□□□□ 0.79
CTDNEP1-207ENST00000572043 QARSP47897 775 aaKnown RBP19.96■□□□□ 0.79
CTDNEP1-207ENST00000572043 TARBP2Q15633 366 aaKnown RBP19.96■□□□□ 0.79
CTDNEP1-207ENST00000572043 EPC2Q52LR7 807 aa19.96■□□□□ 0.79
CTDNEP1-207ENST00000572043 SLFN12Q8IYM2 578 aa19.96■□□□□ 0.79
CTDNEP1-207ENST00000572043 FIBCD1Q8N539 461 aa19.96■□□□□ 0.79
CTDNEP1-207ENST00000572043 NIFKQ9BYG3 293 aaKnown RBP19.96■□□□□ 0.79
CTDNEP1-207ENST00000572043 TSPYL2Q9H2G4 693 aaPredicted RBP19.96■□□□□ 0.79
CTDNEP1-207ENST00000572043 RGL1Q9NZL6 768 aa19.96■□□□□ 0.79
CTDNEP1-207ENST00000572043 WRAP73Q9P2S5 460 aaPredicted RBP19.96■□□□□ 0.79
CTDNEP1-207ENST00000572043 DENND3A2RUS2 1198 aa19.95■□□□□ 0.78
CTDNEP1-207ENST00000572043 GPR182O15218 404 aa19.95■□□□□ 0.78
CTDNEP1-207ENST00000572043 NEMFO60524 1076 aa19.95■□□□□ 0.78
CTDNEP1-207ENST00000572043 HMGN5P82970 282 aaKnown RBP19.95■□□□□ 0.78
CTDNEP1-207ENST00000572043 CYP4A11Q02928 519 aa19.95■□□□□ 0.78
CTDNEP1-207ENST00000572043 BTG3Q14201 252 aaPredicted RBP19.95■□□□□ 0.78
CTDNEP1-207ENST00000572043 CTTNQ14247 550 aaKnown RBP19.95■□□□□ 0.78
CTDNEP1-207ENST00000572043 PAN2Q504Q3 1202 aaKnown RBP19.95■□□□□ 0.78
CTDNEP1-207ENST00000572043 ANO5Q75V66 913 aa19.95■□□□□ 0.78
CTDNEP1-207ENST00000572043 NLRP7Q8WX94 980 aa19.95■□□□□ 0.78
CTDNEP1-207ENST00000572043 DYDC2Q96IM9 177 aa19.95■□□□□ 0.78
CTDNEP1-207ENST00000572043 ADAM2Q99965 735 aa19.95■□□□□ 0.78
CTDNEP1-207ENST00000572043 ADAMTS10Q9H324 1103 aa19.95■□□□□ 0.78
CTDNEP1-207ENST00000572043 BMP2KQ9NSY1 1161 aaPredicted RBP19.95■□□□□ 0.78
CTDNEP1-207ENST00000572043 LRFN2Q9ULH4 789 aa19.95■□□□□ 0.78
CTDNEP1-207ENST00000572043 ADGRA3Q8IWK6 1321 aa19.95■□□□□ 0.78
CTDNEP1-207ENST00000572043 ST18O60284 1047 aa19.94■□□□□ 0.78
CTDNEP1-207ENST00000572043 DGKIO75912 1065 aa19.94■□□□□ 0.78
CTDNEP1-207ENST00000572043 P4HBP07237 508 aaKnown RBP19.94■□□□□ 0.78
CTDNEP1-207ENST00000572043 FGFR4P22455 802 aa19.94■□□□□ 0.78
CTDNEP1-207ENST00000572043 MCM7P33993 719 aa19.94■□□□□ 0.78
CTDNEP1-207ENST00000572043 TXKP42681 527 aa19.94■□□□□ 0.78
CTDNEP1-207ENST00000572043 GATMP50440 423 aa19.94■□□□□ 0.78
CTDNEP1-207ENST00000572043 GPC3P51654 580 aa19.94■□□□□ 0.78
CTDNEP1-207ENST00000572043 NPEPPSP55786 919 aa19.94■□□□□ 0.78
CTDNEP1-207ENST00000572043 GNL2Q13823 731 aaKnown RBP19.94■□□□□ 0.78
CTDNEP1-207ENST00000572043 EPHA7Q15375 998 aa19.94■□□□□ 0.78
CTDNEP1-207ENST00000572043 NPAS4Q8IUM7 802 aa19.94■□□□□ 0.78
CTDNEP1-207ENST00000572043 TMEM192Q8IY95 271 aa19.94■□□□□ 0.78
CTDNEP1-207ENST00000572043 ZNF579Q8NAF0 562 aaKnown RBP19.94■□□□□ 0.78
CTDNEP1-207ENST00000572043 LXNQ9BS40 222 aa19.94■□□□□ 0.78
CTDNEP1-207ENST00000572043 MICAL3Q7RTP6 2002 aa19.93■□□□□ 0.78
CTDNEP1-207ENST00000572043 KAT6AQ92794 2004 aa19.93■□□□□ 0.78
CTDNEP1-207ENST00000572043 CSDE1O75534 798 aaKnown RBP19.93■□□□□ 0.78
CTDNEP1-207ENST00000572043 CSPG5O95196 566 aa19.93■□□□□ 0.78
CTDNEP1-207ENST00000572043 STAG3L1P0CL83 205 aa19.93■□□□□ 0.78
CTDNEP1-207ENST00000572043 POU3F3P20264 500 aaPredicted RBP19.93■□□□□ 0.78
CTDNEP1-207ENST00000572043 CTNNB1P35222 781 aa19.93■□□□□ 0.78
CTDNEP1-207ENST00000572043 SPIRE1Q08AE8 756 aa19.93■□□□□ 0.78
CTDNEP1-207ENST00000572043 ODR4Q5SWX8 454 aa19.93■□□□□ 0.78
CTDNEP1-207ENST00000572043 CEP170P1Q96L14 293 aa19.93■□□□□ 0.78
CTDNEP1-207ENST00000572043 CEP89Q96ST8 783 aa19.93■□□□□ 0.78
CTDNEP1-207ENST00000572043 COL25A1Q9BXS0 654 aaPredicted RBP19.93■□□□□ 0.78
CTDNEP1-207ENST00000572043 TTC12Q9H892 705 aaPredicted RBP19.93■□□□□ 0.78
CTDNEP1-207ENST00000572043 THEGQ9P2T0 379 aa19.93■□□□□ 0.78
CTDNEP1-207ENST00000572043 PCDHA12Q9UN75 941 aa19.93■□□□□ 0.78
CTDNEP1-207ENST00000572043 DKC1O60832 514 aaKnown RBP eCLIP19.92■□□□□ 0.78
CTDNEP1-207ENST00000572043 CD2BP2O95400 341 aaKnown RBP19.92■□□□□ 0.78
CTDNEP1-207ENST00000572043 SARSP49591 514 aaKnown RBP19.92■□□□□ 0.78
CTDNEP1-207ENST00000572043 GPM6BQ13491 265 aa19.92■□□□□ 0.78
CTDNEP1-207ENST00000572043 ZNF174Q15697 407 aa19.92■□□□□ 0.78
CTDNEP1-207ENST00000572043 RHPN2Q8IUC4 686 aa19.92■□□□□ 0.78
CTDNEP1-207ENST00000572043 TPH2Q8IWU9 490 aa19.92■□□□□ 0.78
CTDNEP1-207ENST00000572043 FBXO18Q8NFZ0 1043 aa19.92■□□□□ 0.78
CTDNEP1-207ENST00000572043 ZNF689Q96CS4 500 aaPredicted RBP19.92■□□□□ 0.78
CTDNEP1-207ENST00000572043 SAMD11Q96NU1 681 aa19.92■□□□□ 0.78
CTDNEP1-207ENST00000572043 TMEM60Q9H2L4 133 aa19.92■□□□□ 0.78
CTDNEP1-207ENST00000572043 RC3H2Q9HBD1 1191 aaKnown RBP19.92■□□□□ 0.78
CTDNEP1-207ENST00000572043 CYP26B1Q9NR63 512 aa19.92■□□□□ 0.78
CTDNEP1-207ENST00000572043 SUCLA2Q9P2R7 463 aaPredicted RBP19.92■□□□□ 0.78
CTDNEP1-207ENST00000572043 PCDHB7Q9Y5E2 793 aa19.92■□□□□ 0.78
CTDNEP1-207ENST00000572043 ZBTB39O15060 712 aa19.91■□□□□ 0.78
CTDNEP1-207ENST00000572043 DARSP14868 501 aaKnown RBP19.91■□□□□ 0.78
CTDNEP1-207ENST00000572043 EIF4BP23588 611 aaKnown RBP19.91■□□□□ 0.78
CTDNEP1-207ENST00000572043 YWHABP31946 246 aaKnown RBP19.91■□□□□ 0.78
CTDNEP1-207ENST00000572043 DNM2P50570 870 aa19.91■□□□□ 0.78
CTDNEP1-207ENST00000572043 KSR1Q8IVT5 923 aa19.91■□□□□ 0.78
CTDNEP1-207ENST00000572043 NLRP4Q96MN2 994 aa19.91■□□□□ 0.78
CTDNEP1-207ENST00000572043 EIF2AK1Q9BQI3 630 aaKnown RBP19.91■□□□□ 0.78
CTDNEP1-207ENST00000572043 RGS18Q9NS28 235 aa19.91■□□□□ 0.78
CTDNEP1-207ENST00000572043 C1orf112Q9NSG2 853 aa19.91■□□□□ 0.78
CTDNEP1-207ENST00000572043 MRPL42Q9Y6G3 142 aaKnown RBP19.91■□□□□ 0.78
CTDNEP1-207ENST00000572043 A0A087WZ62 844 aa19.9■□□□□ 0.78
CTDNEP1-207ENST00000572043 IGKV6-21A0A0C4DH24 114 aa19.9■□□□□ 0.78
CTDNEP1-207ENST00000572043 MAFO75444 373 aaPredicted RBP19.9■□□□□ 0.78
CTDNEP1-207ENST00000572043 POLGP54098 1239 aaPredicted RBP19.9■□□□□ 0.78
CTDNEP1-207ENST00000572043 TFF2Q03403 129 aa19.9■□□□□ 0.78
CTDNEP1-207ENST00000572043 SLC24A5Q71RS6 500 aa19.9■□□□□ 0.78
CTDNEP1-207ENST00000572043 C4orf19Q8IY42 314 aa19.9■□□□□ 0.78
CTDNEP1-207ENST00000572043 CRIPAKQ8N1N5 446 aa19.9■□□□□ 0.78
CTDNEP1-207ENST00000572043 TMEM143Q96AN5 459 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms