RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 PRR16Q569H4 304 aa15.45■□□□□ 0.06
RPAIN-209ENST00000571558 AXDND1Q5T1B0 1012 aaPredicted RBP15.45■□□□□ 0.06
RPAIN-209ENST00000571558 ARL6IP4Q66PJ3 421 aaKnown RBP15.45■□□□□ 0.06
RPAIN-209ENST00000571558 ETNPPLQ8TBG4 499 aa15.45■□□□□ 0.06
RPAIN-209ENST00000571558 EDAQ92838 391 aa15.45■□□□□ 0.06
RPAIN-209ENST00000571558 ZFP91Q96JP5 570 aaPredicted RBP15.45■□□□□ 0.06
RPAIN-209ENST00000571558 INPP4AQ96PE3 977 aaPredicted RBP15.45■□□□□ 0.06
RPAIN-209ENST00000571558 MXRA8Q9BRK3 442 aa15.45■□□□□ 0.06
RPAIN-209ENST00000571558 C11orf84Q9BUA3 381 aaPredicted RBP15.45■□□□□ 0.06
RPAIN-209ENST00000571558 LMBRD1Q9NUN5 540 aa15.45■□□□□ 0.06
RPAIN-209ENST00000571558 STAM2O75886 525 aa15.44■□□□□ 0.06
RPAIN-209ENST00000571558 RGS20O76081 388 aa15.44■□□□□ 0.06
RPAIN-209ENST00000571558 ZNF286BP0CG31 522 aa15.44■□□□□ 0.06
RPAIN-209ENST00000571558 MYCLP12524 364 aaPredicted RBP15.44■□□□□ 0.06
RPAIN-209ENST00000571558 MARCKSP29966 332 aaPredicted RBP15.44■□□□□ 0.06
RPAIN-209ENST00000571558 HOXC8P31273 242 aa15.44■□□□□ 0.06
RPAIN-209ENST00000571558 PRPHP41219 470 aa15.44■□□□□ 0.06
RPAIN-209ENST00000571558 IL17AQ16552 155 aa15.44■□□□□ 0.06
RPAIN-209ENST00000571558 ATP6V0A1Q93050 837 aa15.44■□□□□ 0.06
RPAIN-209ENST00000571558 JADE2Q9NQC1 790 aa15.44■□□□□ 0.06
RPAIN-209ENST00000571558 PCDHA7Q9UN72 937 aa15.44■□□□□ 0.06
RPAIN-209ENST00000571558 SRPRBQ9Y5M8 271 aaKnown RBP15.44■□□□□ 0.06
RPAIN-209ENST00000571558 MICAL3Q7RTP6 2002 aa15.44■□□□□ 0.06
RPAIN-209ENST00000571558 C17orf102A2RUQ5 167 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 TBX3O15119 743 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 MSH4O15457 936 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 MBTPS2O43462 519 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 PRPF40AO75400 957 aaKnown RBP15.43■□□□□ 0.06
RPAIN-209ENST00000571558 OR52Z1P0C646 297 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 GNAT1P11488 350 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 ZNF76P36508 570 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 ZNF200P98182 395 aaPredicted RBP15.43■□□□□ 0.06
RPAIN-209ENST00000571558 GRIN1Q05586 938 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 SMAD4Q13485 552 aaKnown RBP15.43■□□□□ 0.06
RPAIN-209ENST00000571558 CALCRLQ16602 461 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 CELF3Q5SZQ8 465 aaKnown RBP15.43■□□□□ 0.06
RPAIN-209ENST00000571558 RPAINQ86UA6 219 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 RNF135Q8IUD6 432 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 FIBCD1Q8N539 461 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 KRI1Q8N9T8 703 aaKnown RBP15.43■□□□□ 0.06
RPAIN-209ENST00000571558 SPATA33Q96N06 139 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 IFIH1Q9BYX4 1025 aaKnown RBP15.43■□□□□ 0.06
RPAIN-209ENST00000571558 KIAA1217Q5T5P2 1943 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 H3BRB1 525 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 GADD45BO75293 160 aaPredicted RBP15.43■□□□□ 0.06
RPAIN-209ENST00000571558 ARP10275 920 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 BMPR1AP36894 532 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 ME1P48163 572 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 SETQ01105 290 aaPredicted RBP15.43■□□□□ 0.06
RPAIN-209ENST00000571558 SEMA3FQ13275 785 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 NFKBIBQ15653 356 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 HSDL1Q3SXM5 330 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 PLA2G4DQ86XP0 818 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 GPRASP2Q96D09 838 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 CLIC6Q96NY7 704 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 C16orf70Q9BSU1 422 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 IRF2BPLQ9H1B7 796 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 TUT1Q9H6E5 874 aaKnown RBP15.43■□□□□ 0.06
RPAIN-209ENST00000571558 KCNH7Q9NS40 1196 aa15.43■□□□□ 0.06
RPAIN-209ENST00000571558 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.42■□□□□ 0.06
RPAIN-209ENST00000571558 GOLGA6L22H0YM25 854 aa15.42■□□□□ 0.06
RPAIN-209ENST00000571558 CUTAO60888 179 aa15.42■□□□□ 0.06
RPAIN-209ENST00000571558 UPP2O95045 317 aa15.42■□□□□ 0.06
RPAIN-209ENST00000571558 FOXK2Q01167 660 aa15.42■□□□□ 0.06
RPAIN-209ENST00000571558 HIC1Q14526 733 aa15.42■□□□□ 0.06
RPAIN-209ENST00000571558 ADALQ6DHV7 355 aa15.42■□□□□ 0.06
RPAIN-209ENST00000571558 ZNF579Q8NAF0 562 aaKnown RBP15.42■□□□□ 0.06
RPAIN-209ENST00000571558 SLC5A5Q92911 643 aa15.42■□□□□ 0.06
RPAIN-209ENST00000571558 GJA10Q969M2 543 aa15.42■□□□□ 0.06
RPAIN-209ENST00000571558 PPP2R3CQ969Q6 453 aa15.42■□□□□ 0.06
RPAIN-209ENST00000571558 FAM20AQ96MK3 541 aa15.42■□□□□ 0.06
RPAIN-209ENST00000571558 MUTYHQ9UIF7 546 aa15.42■□□□□ 0.06
RPAIN-209ENST00000571558 DDX11L8A8MPP1 907 aa15.41■□□□□ 0.06
RPAIN-209ENST00000571558 SPATA31C2B4DYI2 1134 aa15.41■□□□□ 0.06
RPAIN-209ENST00000571558 ICAM3P32942 547 aa15.41■□□□□ 0.06
RPAIN-209ENST00000571558 CTNNB1P35222 781 aa15.41■□□□□ 0.06
RPAIN-209ENST00000571558 FXR2P51116 673 aaKnown RBP eCLIP15.41■□□□□ 0.06
RPAIN-209ENST00000571558 UBE2HP62256 183 aa15.41■□□□□ 0.06
RPAIN-209ENST00000571558 SPIRE1Q08AE8 756 aa15.41■□□□□ 0.06
RPAIN-209ENST00000571558 HYAL1Q12794 435 aa15.41■□□□□ 0.06
RPAIN-209ENST00000571558 MTMR1Q13613 665 aa15.41■□□□□ 0.06
RPAIN-209ENST00000571558 DTHD1Q6ZMT9 781 aa15.41■□□□□ 0.06
RPAIN-209ENST00000571558 TRIM67Q6ZTA4 783 aa15.41■□□□□ 0.06
RPAIN-209ENST00000571558 SLFN12Q8IYM2 578 aa15.41■□□□□ 0.06
RPAIN-209ENST00000571558 IGSF22Q8N9C0 903 aa15.41■□□□□ 0.06
RPAIN-209ENST00000571558 CLP1Q92989 425 aaKnown RBP15.41■□□□□ 0.06
RPAIN-209ENST00000571558 PLVAPQ9BX97 442 aa15.41■□□□□ 0.06
RPAIN-209ENST00000571558 CSRNP2Q9H175 543 aa15.41■□□□□ 0.06
RPAIN-209ENST00000571558 AGO4Q9HCK5 861 aaKnown RBP15.41■□□□□ 0.06
RPAIN-209ENST00000571558 RALGAPA2Q2PPJ7 1873 aa15.4■□□□□ 0.06
RPAIN-209ENST00000571558 A0A1W2PQ27 194 aa15.4■□□□□ 0.06
RPAIN-209ENST00000571558 A0A1W2PQ64 194 aa15.4■□□□□ 0.06
RPAIN-209ENST00000571558 A0A1W2PQD8 194 aa15.4■□□□□ 0.06
RPAIN-209ENST00000571558 VWA3AA6NCI4 1184 aa15.4■□□□□ 0.06
RPAIN-209ENST00000571558 MAFGO15525 162 aa15.4■□□□□ 0.06
RPAIN-209ENST00000571558 DHX15O43143 795 aaKnown RBP15.4■□□□□ 0.06
RPAIN-209ENST00000571558 PSMD10O75832 226 aa15.4■□□□□ 0.06
RPAIN-209ENST00000571558 EYA4O95677 639 aa15.4■□□□□ 0.06
RPAIN-209ENST00000571558 GGPS1O95749 300 aa15.4■□□□□ 0.06
RPAIN-209ENST00000571558 LONP1P36776 959 aaKnown RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms