RNA–Protein interactions for RNA: ENST00000571064.5

UBFD1-210, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 794 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-210ENST00000571064 MBTPS2O43462 519 aa24.21■■□□□ 1.47
UBFD1-210ENST00000571064 F13A1P00488 732 aa24.21■■□□□ 1.47
UBFD1-210ENST00000571064 CTNNB1P35222 781 aa24.21■■□□□ 1.47
UBFD1-210ENST00000571064 RILPL1Q5EBL4 403 aa24.21■■□□□ 1.47
UBFD1-210ENST00000571064 GIMAP8Q8ND71 665 aaPredicted RBP24.21■■□□□ 1.47
UBFD1-210ENST00000571064 MTMR9Q96QG7 549 aa24.21■■□□□ 1.47
UBFD1-210ENST00000571064 MLXIPQ9HAP2 919 aa24.21■■□□□ 1.47
UBFD1-210ENST00000571064 EIF4ENIF1Q9NRA8 985 aaKnown RBP24.21■■□□□ 1.47
UBFD1-210ENST00000571064 ATG2AQ2TAZ0 1938 aa24.21■■□□□ 1.47
UBFD1-210ENST00000571064 MYH15Q9Y2K3 1946 aa24.21■■□□□ 1.47
UBFD1-210ENST00000571064 COL4A6Q14031 1691 aa24.21■■□□□ 1.47
UBFD1-210ENST00000571064 DDX39AO00148 427 aaKnown RBP24.2■■□□□ 1.46
UBFD1-210ENST00000571064 GRM6O15303 877 aa24.2■■□□□ 1.46
UBFD1-210ENST00000571064 NCK2O43639 380 aa24.2■■□□□ 1.46
UBFD1-210ENST00000571064 NEMFO60524 1076 aa24.2■■□□□ 1.46
UBFD1-210ENST00000571064 CCNE2O96020 404 aa24.2■■□□□ 1.46
UBFD1-210ENST00000571064 FIBCD1Q8N539 461 aa24.2■■□□□ 1.46
UBFD1-210ENST00000571064 PRSS33Q8NF86 280 aa24.2■■□□□ 1.46
UBFD1-210ENST00000571064 ZSCAN16Q9H4T2 348 aaPredicted RBP24.2■■□□□ 1.46
UBFD1-210ENST00000571064 TECTAO75443 2155 aa24.2■■□□□ 1.46
UBFD1-210ENST00000571064 PSMD10O75832 226 aa24.19■■□□□ 1.46
UBFD1-210ENST00000571064 CSPG5O95196 566 aa24.19■■□□□ 1.46
UBFD1-210ENST00000571064 SMIM10L2AP0DMW4 78 aa24.19■■□□□ 1.46
UBFD1-210ENST00000571064 SMIM10L2BP0DMW5 78 aa24.19■■□□□ 1.46
UBFD1-210ENST00000571064 HOXC8P31273 242 aa24.19■■□□□ 1.46
UBFD1-210ENST00000571064 GTF2F1P35269 517 aaKnown RBP eCLIP24.19■■□□□ 1.46
UBFD1-210ENST00000571064 ORC2Q13416 577 aaPredicted RBP24.19■■□□□ 1.46
UBFD1-210ENST00000571064 IER5LQ5T953 404 aa24.19■■□□□ 1.46
UBFD1-210ENST00000571064 FAM20AQ96MK3 541 aa24.19■■□□□ 1.46
UBFD1-210ENST00000571064 POP1Q99575 1024 aaKnown RBP24.19■■□□□ 1.46
UBFD1-210ENST00000571064 GPR20Q99678 358 aa24.19■■□□□ 1.46
UBFD1-210ENST00000571064 SDF4Q9BRK5 362 aa24.19■■□□□ 1.46
UBFD1-210ENST00000571064 RNPEPQ9H4A4 650 aa24.19■■□□□ 1.46
UBFD1-210ENST00000571064 JPH1Q9HDC5 661 aaPredicted RBP24.19■■□□□ 1.46
UBFD1-210ENST00000571064 TRIOO75962 3097 aa24.19■■□□□ 1.46
UBFD1-210ENST00000571064 RALGAPA2Q2PPJ7 1873 aa24.19■■□□□ 1.46
UBFD1-210ENST00000571064 GSTTP1A0A1W2PQM5 241 aa24.18■■□□□ 1.46
UBFD1-210ENST00000571064 C5orf67F2Z3F1 127 aa24.18■■□□□ 1.46
UBFD1-210ENST00000571064 H3BRB1 525 aa24.18■■□□□ 1.46
UBFD1-210ENST00000571064 TBX3O15119 743 aa24.18■■□□□ 1.46
UBFD1-210ENST00000571064 TBX10O75333 385 aa24.18■■□□□ 1.46
UBFD1-210ENST00000571064 LINC00271P0C7V0 271 aa24.18■■□□□ 1.46
UBFD1-210ENST00000571064 SP4Q02446 784 aa24.18■■□□□ 1.46
UBFD1-210ENST00000571064 CALCRLQ16602 461 aa24.18■■□□□ 1.46
UBFD1-210ENST00000571064 LRCH2Q5VUJ6 765 aa24.18■■□□□ 1.46
UBFD1-210ENST00000571064 RIT2Q99578 217 aa24.18■■□□□ 1.46
UBFD1-210ENST00000571064 IGFLR1Q9H665 355 aa24.18■■□□□ 1.46
UBFD1-210ENST00000571064 TUT1Q9H6E5 874 aaKnown RBP24.18■■□□□ 1.46
UBFD1-210ENST00000571064 TBC1D22BQ9NU19 505 aa24.18■■□□□ 1.46
UBFD1-210ENST00000571064 SLC9A2Q9UBY0 812 aa24.18■■□□□ 1.46
UBFD1-210ENST00000571064 DAXXQ9UER7 740 aaPredicted RBP24.18■■□□□ 1.46
UBFD1-210ENST00000571064 LINC01565O15544 149 aa24.17■■□□□ 1.46
UBFD1-210ENST00000571064 BMPR1AP36894 532 aa24.17■■□□□ 1.46
UBFD1-210ENST00000571064 B3GNT9Q6UX72 402 aa24.17■■□□□ 1.46
UBFD1-210ENST00000571064 EDAQ92838 391 aa24.17■■□□□ 1.46
UBFD1-210ENST00000571064 UNC45AQ9H3U1 944 aa24.17■■□□□ 1.46
UBFD1-210ENST00000571064 VAV3Q9UKW4 847 aa24.17■■□□□ 1.46
UBFD1-210ENST00000571064 GAS7O60861 476 aa24.16■■□□□ 1.46
UBFD1-210ENST00000571064 LGALS2P05162 132 aa24.16■■□□□ 1.46
UBFD1-210ENST00000571064 RB1P06400 928 aa24.16■■□□□ 1.46
UBFD1-210ENST00000571064 ACTR2P61160 394 aa24.16■■□□□ 1.46
UBFD1-210ENST00000571064 PTGDRQ13258 359 aa24.16■■□□□ 1.46
UBFD1-210ENST00000571064 SMAD4Q13485 552 aaKnown RBP24.16■■□□□ 1.46
UBFD1-210ENST00000571064 IPO9Q96P70 1041 aaKnown RBP24.16■■□□□ 1.46
UBFD1-210ENST00000571064 C11orf84Q9BUA3 381 aaPredicted RBP24.16■■□□□ 1.46
UBFD1-210ENST00000571064 TEKT3Q9BXF9 490 aa24.16■■□□□ 1.46
UBFD1-210ENST00000571064 LMAN2LQ9H0V9 348 aa24.16■■□□□ 1.46
UBFD1-210ENST00000571064 CLIC4Q9Y696 253 aa24.16■■□□□ 1.46
UBFD1-210ENST00000571064 CAND2O75155 1236 aa24.15■■□□□ 1.46
UBFD1-210ENST00000571064 APBB2Q92870 758 aa24.15■■□□□ 1.46
UBFD1-210ENST00000571064 USP28Q96RU2 1077 aa24.15■■□□□ 1.46
UBFD1-210ENST00000571064 SETD4Q9NVD3 440 aa24.15■■□□□ 1.46
UBFD1-210ENST00000571064 CD207Q9UJ71 328 aa24.15■■□□□ 1.46
UBFD1-210ENST00000571064 ATG7O95352 703 aa24.14■■□□□ 1.45
UBFD1-210ENST00000571064 OR52Z1P0C646 297 aa24.14■■□□□ 1.45
UBFD1-210ENST00000571064 TXKP42681 527 aa24.14■■□□□ 1.45
UBFD1-210ENST00000571064 SPIRE1Q08AE8 756 aa24.14■■□□□ 1.45
UBFD1-210ENST00000571064 SF3A1Q15459 793 aaKnown RBP24.14■■□□□ 1.45
UBFD1-210ENST00000571064 IL17AQ16552 155 aa24.14■■□□□ 1.45
UBFD1-210ENST00000571064 FOXD4L6Q3SYB3 417 aaPredicted RBP24.14■■□□□ 1.45
UBFD1-210ENST00000571064 FOXD4L3Q6VB84 417 aaPredicted RBP24.14■■□□□ 1.45
UBFD1-210ENST00000571064 BMP8AQ7Z5Y6 402 aa24.14■■□□□ 1.45
UBFD1-210ENST00000571064 PBXIP1Q96AQ6 731 aa24.14■■□□□ 1.45
UBFD1-210ENST00000571064 CHAMP1Q96JM3 812 aa24.14■■□□□ 1.45
UBFD1-210ENST00000571064 PCYT2Q99447 389 aa24.14■■□□□ 1.45
UBFD1-210ENST00000571064 TMEM221A6NGB7 291 aa24.13■■□□□ 1.45
UBFD1-210ENST00000571064 M0R296 226 aa24.13■■□□□ 1.45
UBFD1-210ENST00000571064 EML1O00423 815 aa24.13■■□□□ 1.45
UBFD1-210ENST00000571064 NOP56O00567 594 aaKnown RBP24.13■■□□□ 1.45
UBFD1-210ENST00000571064 MARCH6O60337 910 aa24.13■■□□□ 1.45
UBFD1-210ENST00000571064 BAG4O95429 457 aaKnown RBP24.13■■□□□ 1.45
UBFD1-210ENST00000571064 TCF7P36402 384 aaPredicted RBP24.13■■□□□ 1.45
UBFD1-210ENST00000571064 PTPN5P54829 565 aa24.13■■□□□ 1.45
UBFD1-210ENST00000571064 ATP2C1P98194 919 aaPredicted RBP24.13■■□□□ 1.45
UBFD1-210ENST00000571064 KRT76Q01546 638 aa24.13■■□□□ 1.45
UBFD1-210ENST00000571064 PTPAQ15257 358 aa24.13■■□□□ 1.45
UBFD1-210ENST00000571064 ZNF746Q6NUN9 644 aaPredicted RBP24.13■■□□□ 1.45
UBFD1-210ENST00000571064 ABHD15Q6UXT9 468 aa24.13■■□□□ 1.45
UBFD1-210ENST00000571064 SLFN12Q8IYM2 578 aa24.13■■□□□ 1.45
UBFD1-210ENST00000571064 SEPT1Q8WYJ6 367 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms