RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 TRIM29Q14134 588 aa17.02■□□□□ 0.32
RAB40B-203ENST00000570676 NONOQ15233 471 aaKnown RBP eCLIP17.02■□□□□ 0.32
RAB40B-203ENST00000570676 INF2Q27J81 1249 aa17.02■□□□□ 0.32
RAB40B-203ENST00000570676 TMEM266Q2M3C6 531 aa17.02■□□□□ 0.32
RAB40B-203ENST00000570676 KRT25Q7Z3Z0 450 aa17.02■□□□□ 0.32
RAB40B-203ENST00000570676 TMEM192Q8IY95 271 aa17.02■□□□□ 0.32
RAB40B-203ENST00000570676 ERVK-5Q9HDB9 667 aa17.02■□□□□ 0.32
RAB40B-203ENST00000570676 GJB4Q9NTQ9 266 aa17.02■□□□□ 0.32
RAB40B-203ENST00000570676 TTC28Q96AY4 2481 aa17.02■□□□□ 0.31
RAB40B-203ENST00000570676 H3BNC9 293 aa17.01■□□□□ 0.31
RAB40B-203ENST00000570676 H3BQV1 296 aa17.01■□□□□ 0.31
RAB40B-203ENST00000570676 SLC37A4O43826 429 aa17.01■□□□□ 0.31
RAB40B-203ENST00000570676 DGKIO75912 1065 aa17.01■□□□□ 0.31
RAB40B-203ENST00000570676 SYT1P21579 422 aa17.01■□□□□ 0.31
RAB40B-203ENST00000570676 SFNP31947 248 aa17.01■□□□□ 0.31
RAB40B-203ENST00000570676 DDIT3P35638 169 aa17.01■□□□□ 0.31
RAB40B-203ENST00000570676 KCNQ1P51787 676 aa17.01■□□□□ 0.31
RAB40B-203ENST00000570676 GUCY1B3Q02153 619 aa17.01■□□□□ 0.31
RAB40B-203ENST00000570676 TRMT1LQ7Z2T5 733 aaKnown RBP17.01■□□□□ 0.31
RAB40B-203ENST00000570676 FIBCD1Q8N539 461 aa17.01■□□□□ 0.31
RAB40B-203ENST00000570676 ADAMTS19Q8TE59 1207 aa17.01■□□□□ 0.31
RAB40B-203ENST00000570676 PPP1R16BQ96T49 567 aa17.01■□□□□ 0.31
RAB40B-203ENST00000570676 COG5Q9UP83 839 aa17.01■□□□□ 0.31
RAB40B-203ENST00000570676 CEP131Q9UPN4 1083 aa17.01■□□□□ 0.31
RAB40B-203ENST00000570676 NOC2LQ9Y3T9 749 aaKnown RBP17.01■□□□□ 0.31
RAB40B-203ENST00000570676 PLXNA4Q9HCM2 1894 aa17.01■□□□□ 0.31
RAB40B-203ENST00000570676 VPS37CA5D8V6 355 aaPredicted RBP17■□□□□ 0.31
RAB40B-203ENST00000570676 C5orf67F2Z3F1 127 aa17■□□□□ 0.31
RAB40B-203ENST00000570676 MGEA5O60502 916 aa17■□□□□ 0.31
RAB40B-203ENST00000570676 GPR32O75388 356 aa17■□□□□ 0.31
RAB40B-203ENST00000570676 CLCN3P51790 818 aa17■□□□□ 0.31
RAB40B-203ENST00000570676 NPAS4Q8IUM7 802 aa17■□□□□ 0.31
RAB40B-203ENST00000570676 FBXO18Q8NFZ0 1043 aa17■□□□□ 0.31
RAB40B-203ENST00000570676 RDM1Q8NG50 284 aa17■□□□□ 0.31
RAB40B-203ENST00000570676 OXER1Q8TDS5 423 aa17■□□□□ 0.31
RAB40B-203ENST00000570676 CLP1Q92989 425 aaKnown RBP17■□□□□ 0.31
RAB40B-203ENST00000570676 MRPL38Q96DV4 380 aaKnown RBP17■□□□□ 0.31
RAB40B-203ENST00000570676 OSMRQ99650 979 aa17■□□□□ 0.31
RAB40B-203ENST00000570676 DDX25Q9UHL0 483 aaKnown RBP17■□□□□ 0.31
RAB40B-203ENST00000570676 GINS2Q9Y248 185 aa17■□□□□ 0.31
RAB40B-203ENST00000570676 A0A0C4DFX4 3053 aa16.99■□□□□ 0.31
RAB40B-203ENST00000570676 STX6O43752 255 aa16.99■□□□□ 0.31
RAB40B-203ENST00000570676 RPS6KA5O75582 802 aa16.99■□□□□ 0.31
RAB40B-203ENST00000570676 STBD1O95210 358 aa16.99■□□□□ 0.31
RAB40B-203ENST00000570676 VTNP04004 478 aa16.99■□□□□ 0.31
RAB40B-203ENST00000570676 BMP1P13497 986 aa16.99■□□□□ 0.31
RAB40B-203ENST00000570676 CTNNB1P35222 781 aa16.99■□□□□ 0.31
RAB40B-203ENST00000570676 GPM6BQ13491 265 aa16.99■□□□□ 0.31
RAB40B-203ENST00000570676 KIZQ2M2Z5 673 aa16.99■□□□□ 0.31
RAB40B-203ENST00000570676 MIER3Q7Z3K6 550 aa16.99■□□□□ 0.31
RAB40B-203ENST00000570676 FAM228AQ86W67 206 aa16.99■□□□□ 0.31
RAB40B-203ENST00000570676 KCNMB3Q9NPA1 279 aa16.99■□□□□ 0.31
RAB40B-203ENST00000570676 CCDC194A0A1B0GVG4 234 aa16.98■□□□□ 0.31
RAB40B-203ENST00000570676 FAM205CA6NFA0 338 aa16.98■□□□□ 0.31
RAB40B-203ENST00000570676 MAGEB2O15479 319 aa16.98■□□□□ 0.31
RAB40B-203ENST00000570676 PDIA4P13667 645 aaKnown RBP16.98■□□□□ 0.31
RAB40B-203ENST00000570676 CRYBB1P53674 252 aaPredicted RBP16.98■□□□□ 0.31
RAB40B-203ENST00000570676 NFX1Q12986 1120 aaKnown RBP16.98■□□□□ 0.31
RAB40B-203ENST00000570676 BTG3Q14201 252 aaPredicted RBP16.98■□□□□ 0.31
RAB40B-203ENST00000570676 TARBP2Q15633 366 aaKnown RBP16.98■□□□□ 0.31
RAB40B-203ENST00000570676 AAK1Q2M2I8 961 aa16.98■□□□□ 0.31
RAB40B-203ENST00000570676 LETM2Q2VYF4 491 aa16.98■□□□□ 0.31
RAB40B-203ENST00000570676 EARS2Q5JPH6 523 aaKnown RBP16.98■□□□□ 0.31
RAB40B-203ENST00000570676 NEK8Q86SG6 692 aa16.98■□□□□ 0.31
RAB40B-203ENST00000570676 CMTR2Q8IYT2 770 aaKnown RBP16.98■□□□□ 0.31
RAB40B-203ENST00000570676 LRRC71Q8N4P6 559 aa16.98■□□□□ 0.31
RAB40B-203ENST00000570676 METTL13Q8N6R0 699 aa16.98■□□□□ 0.31
RAB40B-203ENST00000570676 TNFRSF25Q93038 417 aa16.98■□□□□ 0.31
RAB40B-203ENST00000570676 HLA-CQ95604 372 aa16.98■□□□□ 0.31
RAB40B-203ENST00000570676 CEP89Q96ST8 783 aa16.98■□□□□ 0.31
RAB40B-203ENST00000570676 VAV3Q9UKW4 847 aa16.98■□□□□ 0.31
RAB40B-203ENST00000570676 CIZ1Q9ULV3 898 aaPredicted RBP16.98■□□□□ 0.31
RAB40B-203ENST00000570676 RWDD3Q9Y3V2 267 aa16.98■□□□□ 0.31
RAB40B-203ENST00000570676 MRPL42Q9Y6G3 142 aaKnown RBP16.98■□□□□ 0.31
RAB40B-203ENST00000570676 TMEM150BA6NC51 233 aa16.97■□□□□ 0.31
RAB40B-203ENST00000570676 TNFRSF10AO00220 468 aa16.97■□□□□ 0.31
RAB40B-203ENST00000570676 MMP1P03956 469 aa16.97■□□□□ 0.31
RAB40B-203ENST00000570676 BMPR1AP36894 532 aa16.97■□□□□ 0.31
RAB40B-203ENST00000570676 SARSP49591 514 aaKnown RBP16.97■□□□□ 0.31
RAB40B-203ENST00000570676 GATMP50440 423 aa16.97■□□□□ 0.31
RAB40B-203ENST00000570676 PKP1Q13835 747 aa16.97■□□□□ 0.31
RAB40B-203ENST00000570676 SAFBQ15424 915 aaKnown RBP eCLIP16.97■□□□□ 0.31
RAB40B-203ENST00000570676 PTPROQ16827 1216 aa16.97■□□□□ 0.31
RAB40B-203ENST00000570676 TIGD5Q53EQ6 642 aa16.97■□□□□ 0.31
RAB40B-203ENST00000570676 PPP4R3AQ6IN85 833 aa16.97■□□□□ 0.31
RAB40B-203ENST00000570676 EFCAB12Q6NXP0 572 aa16.97■□□□□ 0.31
RAB40B-203ENST00000570676 FAM43BQ6ZT52 329 aaPredicted RBP16.97■□□□□ 0.31
RAB40B-203ENST00000570676 PIK3AP1Q6ZUJ8 805 aa16.97■□□□□ 0.31
RAB40B-203ENST00000570676 MAP7D2Q96T17 732 aa16.97■□□□□ 0.31
RAB40B-203ENST00000570676 UHRF1Q96T88 793 aaPredicted RBP16.97■□□□□ 0.31
RAB40B-203ENST00000570676 ADAMTS10Q9H324 1103 aa16.97■□□□□ 0.31
RAB40B-203ENST00000570676 UBE2ZQ9H832 354 aaPredicted RBP16.97■□□□□ 0.31
RAB40B-203ENST00000570676 ST3GAL5Q9UNP4 418 aa16.97■□□□□ 0.31
RAB40B-203ENST00000570676 MTMR6Q9Y217 621 aa16.97■□□□□ 0.31
RAB40B-203ENST00000570676 C9IYK1 514 aa16.96■□□□□ 0.31
RAB40B-203ENST00000570676 EML1O00423 815 aa16.96■□□□□ 0.31
RAB40B-203ENST00000570676 RB1P06400 928 aa16.96■□□□□ 0.31
RAB40B-203ENST00000570676 STAG3L1P0CL83 205 aa16.96■□□□□ 0.31
RAB40B-203ENST00000570676 GCFC2P16383 781 aaKnown RBP16.96■□□□□ 0.31
RAB40B-203ENST00000570676 NUCB2P80303 420 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms