RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 KCNK12Q9HB15 430 aa11.99□□□□□ -0.49
CTDNEP1-202ENST00000570380 WDR81Q562E7 1941 aa11.99□□□□□ -0.49
CTDNEP1-202ENST00000570380 CHD6Q8TD26 2715 aa11.98□□□□□ -0.49
CTDNEP1-202ENST00000570380 KRBA1A5PL33 1030 aa11.98□□□□□ -0.49
CTDNEP1-202ENST00000570380 STK25O00506 426 aa11.98□□□□□ -0.49
CTDNEP1-202ENST00000570380 MEIS2O14770 477 aa11.98□□□□□ -0.49
CTDNEP1-202ENST00000570380 NARSO43776 548 aaKnown RBP11.98□□□□□ -0.49
CTDNEP1-202ENST00000570380 CXCL14O95715 111 aa11.98□□□□□ -0.49
CTDNEP1-202ENST00000570380 SP9P0CG40 484 aa11.98□□□□□ -0.49
CTDNEP1-202ENST00000570380 DSC3Q14574 896 aa11.98□□□□□ -0.49
CTDNEP1-202ENST00000570380 TMC5Q6UXY8 1006 aa11.98□□□□□ -0.49
CTDNEP1-202ENST00000570380 FAM228AQ86W67 206 aa11.98□□□□□ -0.49
CTDNEP1-202ENST00000570380 KIAA0319LQ8IZA0 1049 aa11.98□□□□□ -0.49
CTDNEP1-202ENST00000570380 SLC39A11Q8N1S5 342 aa11.98□□□□□ -0.49
CTDNEP1-202ENST00000570380 PIBF1Q8WXW3 757 aa11.98□□□□□ -0.49
CTDNEP1-202ENST00000570380 ACSF2Q96CM8 615 aaPredicted RBP11.98□□□□□ -0.49
CTDNEP1-202ENST00000570380 CDHR1Q96JP9 859 aa11.98□□□□□ -0.49
CTDNEP1-202ENST00000570380 KRT23Q9C075 422 aa11.98□□□□□ -0.49
CTDNEP1-202ENST00000570380 DZANK1Q9NVP4 752 aa11.98□□□□□ -0.49
CTDNEP1-202ENST00000570380 PCDHB15Q9Y5E8 787 aa11.98□□□□□ -0.49
CTDNEP1-202ENST00000570380 BAHCC1Q9P281 2608 aa11.98□□□□□ -0.49
CTDNEP1-202ENST00000570380 GPR179Q6PRD1 2367 aa11.98□□□□□ -0.49
CTDNEP1-202ENST00000570380 PIK3CDO00329 1044 aa11.97□□□□□ -0.49
CTDNEP1-202ENST00000570380 GPR182O15218 404 aa11.97□□□□□ -0.49
CTDNEP1-202ENST00000570380 CFHP08603 1231 aa11.97□□□□□ -0.49
CTDNEP1-202ENST00000570380 KLRC1P26715 233 aa11.97□□□□□ -0.49
CTDNEP1-202ENST00000570380 CA8P35219 290 aa11.97□□□□□ -0.49
CTDNEP1-202ENST00000570380 MFAP1P55081 439 aaKnown RBP11.97□□□□□ -0.49
CTDNEP1-202ENST00000570380 ODR4Q5SWX8 454 aa11.97□□□□□ -0.49
CTDNEP1-202ENST00000570380 CYB5R4Q7L1T6 521 aa11.97□□□□□ -0.49
CTDNEP1-202ENST00000570380 OTOP3Q7RTS5 596 aa11.97□□□□□ -0.49
CTDNEP1-202ENST00000570380 LRRC43Q8N309 656 aa11.97□□□□□ -0.49
CTDNEP1-202ENST00000570380 SUMF1Q8NBK3 374 aa11.97□□□□□ -0.49
CTDNEP1-202ENST00000570380 SLC22A17Q8WUG5 538 aa11.97□□□□□ -0.49
CTDNEP1-202ENST00000570380 AUTS2Q8WXX7 1259 aa11.97□□□□□ -0.49
CTDNEP1-202ENST00000570380 TNPO1Q92973 898 aaKnown RBP11.97□□□□□ -0.49
CTDNEP1-202ENST00000570380 CUL5Q93034 780 aa11.97□□□□□ -0.49
CTDNEP1-202ENST00000570380 AZI2Q9H6S1 392 aa11.97□□□□□ -0.49
CTDNEP1-202ENST00000570380 WNT16Q9UBV4 365 aa11.97□□□□□ -0.49
CTDNEP1-202ENST00000570380 RCAN3Q9UKA8 241 aa11.97□□□□□ -0.49
CTDNEP1-202ENST00000570380 UBIAD1Q9Y5Z9 338 aa11.97□□□□□ -0.49
CTDNEP1-202ENST00000570380 USP24Q9UPU5 2620 aa11.96□□□□□ -0.49
CTDNEP1-202ENST00000570380 CHD8Q9HCK8 2581 aa11.96□□□□□ -0.49
CTDNEP1-202ENST00000570380 PATJQ8NI35 1801 aa11.96□□□□□ -0.49
CTDNEP1-202ENST00000570380 NT5C1B-RDH14C9J2C7 533 aa11.96□□□□□ -0.49
CTDNEP1-202ENST00000570380 HOXA2O43364 376 aa11.96□□□□□ -0.49
CTDNEP1-202ENST00000570380 STAT5BP51692 787 aa11.96□□□□□ -0.49
CTDNEP1-202ENST00000570380 ATXN1P54253 815 aaKnown RBP11.96□□□□□ -0.49
CTDNEP1-202ENST00000570380 TBC1D8BQ0IIM8 1120 aa11.96□□□□□ -0.49
CTDNEP1-202ENST00000570380 MTMR1Q13613 665 aa11.96□□□□□ -0.49
CTDNEP1-202ENST00000570380 ST3GAL2Q16842 350 aa11.96□□□□□ -0.49
CTDNEP1-202ENST00000570380 ZC3H14Q6PJT7 736 aaKnown RBP11.96□□□□□ -0.49
CTDNEP1-202ENST00000570380 CCDC149Q6ZUS6 474 aa11.96□□□□□ -0.49
CTDNEP1-202ENST00000570380 PLPPR4Q7Z2D5 763 aa11.96□□□□□ -0.49
CTDNEP1-202ENST00000570380 GPR149Q86SP6 731 aa11.96□□□□□ -0.49
CTDNEP1-202ENST00000570380 PPP1R16BQ96T49 567 aa11.96□□□□□ -0.49
CTDNEP1-202ENST00000570380 OSMRQ99650 979 aa11.96□□□□□ -0.49
CTDNEP1-202ENST00000570380 SENP2Q9HC62 589 aa11.96□□□□□ -0.49
CTDNEP1-202ENST00000570380 JPH1Q9HDC5 661 aaPredicted RBP11.96□□□□□ -0.49
CTDNEP1-202ENST00000570380 JADE2Q9NQC1 790 aa11.96□□□□□ -0.49
CTDNEP1-202ENST00000570380 DLGAP2Q9P1A6 1054 aa11.96□□□□□ -0.49
CTDNEP1-202ENST00000570380 IGSF9Q9P2J2 1179 aa11.96□□□□□ -0.49
CTDNEP1-202ENST00000570380 SLC9A2Q9UBY0 812 aa11.96□□□□□ -0.49
CTDNEP1-202ENST00000570380 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.95□□□□□ -0.5
CTDNEP1-202ENST00000570380 DCNP07585 359 aaKnown RBP11.95□□□□□ -0.5
CTDNEP1-202ENST00000570380 SDSP20132 328 aa11.95□□□□□ -0.5
CTDNEP1-202ENST00000570380 METAP2P50579 478 aaKnown RBP eCLIP11.95□□□□□ -0.5
CTDNEP1-202ENST00000570380 CRYBB1P53674 252 aaPredicted RBP11.95□□□□□ -0.5
CTDNEP1-202ENST00000570380 ACTR2P61160 394 aa11.95□□□□□ -0.5
CTDNEP1-202ENST00000570380 TROAPQ12815 778 aa11.95□□□□□ -0.5
CTDNEP1-202ENST00000570380 IMMTQ16891 758 aaKnown RBP11.95□□□□□ -0.5
CTDNEP1-202ENST00000570380 KIZQ2M2Z5 673 aa11.95□□□□□ -0.5
CTDNEP1-202ENST00000570380 CLLU1OSQ5K130 101 aa11.95□□□□□ -0.5
CTDNEP1-202ENST00000570380 SPECC1Q5M775 1068 aa11.95□□□□□ -0.5
CTDNEP1-202ENST00000570380 ANKRD45Q5TZF3 282 aa11.95□□□□□ -0.5
CTDNEP1-202ENST00000570380 CABP7Q86V35 215 aa11.95□□□□□ -0.5
CTDNEP1-202ENST00000570380 ABI1Q8IZP0 508 aa11.95□□□□□ -0.5
CTDNEP1-202ENST00000570380 VPS52Q8N1B4 723 aa11.95□□□□□ -0.5
CTDNEP1-202ENST00000570380 RSAD2Q8WXG1 361 aa11.95□□□□□ -0.5
CTDNEP1-202ENST00000570380 ZBP1Q9H171 429 aa11.95□□□□□ -0.5
CTDNEP1-202ENST00000570380 CNNM2Q9H8M5 875 aa11.95□□□□□ -0.5
CTDNEP1-202ENST00000570380 TBC1D17Q9HA65 648 aa11.95□□□□□ -0.5
CTDNEP1-202ENST00000570380 CA14Q9ULX7 337 aa11.95□□□□□ -0.5
CTDNEP1-202ENST00000570380 IRAK3Q9Y616 596 aa11.95□□□□□ -0.5
CTDNEP1-202ENST00000570380 MYH15Q9Y2K3 1946 aa11.94□□□□□ -0.5
CTDNEP1-202ENST00000570380 MTCL1Q9Y4B5 1905 aaKnown RBP11.94□□□□□ -0.5
CTDNEP1-202ENST00000570380 MAFGO15525 162 aa11.94□□□□□ -0.5
CTDNEP1-202ENST00000570380 N4BP1O75113 896 aaKnown RBP11.94□□□□□ -0.5
CTDNEP1-202ENST00000570380 RFX1P22670 979 aa11.94□□□□□ -0.5
CTDNEP1-202ENST00000570380 BCAR1P56945 870 aa11.94□□□□□ -0.5
CTDNEP1-202ENST00000570380 BMS1Q14692 1282 aaKnown RBP11.94□□□□□ -0.5
CTDNEP1-202ENST00000570380 TMEM173Q86WV6 379 aaPredicted RBP11.94□□□□□ -0.5
CTDNEP1-202ENST00000570380 ECHDC2Q86YB7 292 aa11.94□□□□□ -0.5
CTDNEP1-202ENST00000570380 C1orf210Q8IVY1 113 aa11.94□□□□□ -0.5
CTDNEP1-202ENST00000570380 TMEM87AQ8NBN3 555 aa11.94□□□□□ -0.5
CTDNEP1-202ENST00000570380 RILPL2Q969X0 211 aa11.94□□□□□ -0.5
CTDNEP1-202ENST00000570380 TMEM169Q96HH4 297 aa11.94□□□□□ -0.5
CTDNEP1-202ENST00000570380 SFXN1Q9H9B4 322 aa11.94□□□□□ -0.5
CTDNEP1-202ENST00000570380 DOCK6Q96HP0 2047 aa11.93□□□□□ -0.5
CTDNEP1-202ENST00000570380 POTEMA6NI47 508 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms