RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 UNC93B1Q9H1C4 597 aa17.1■□□□□ 0.33
HERPUD1-219ENST00000570273 MYH9P35579 1960 aaKnown RBP17.1■□□□□ 0.33
HERPUD1-219ENST00000570273 ARID2Q68CP9 1835 aa17.1■□□□□ 0.33
HERPUD1-219ENST00000570273 COL1A2P08123 1366 aa17.09■□□□□ 0.33
HERPUD1-219ENST00000570273 FRMD3A2A2Y4 597 aa17.09■□□□□ 0.33
HERPUD1-219ENST00000570273 MYCP01106 439 aaPredicted RBP17.09■□□□□ 0.33
HERPUD1-219ENST00000570273 INSRRP14616 1297 aa17.09■□□□□ 0.33
HERPUD1-219ENST00000570273 GAP43P17677 238 aa17.09■□□□□ 0.33
HERPUD1-219ENST00000570273 CST5P28325 142 aaPredicted RBP17.09■□□□□ 0.33
HERPUD1-219ENST00000570273 TBC1D8BQ0IIM8 1120 aa17.09■□□□□ 0.33
HERPUD1-219ENST00000570273 PPFIA1Q13136 1202 aa17.09■□□□□ 0.33
HERPUD1-219ENST00000570273 KIAA0753Q2KHM9 967 aa17.09■□□□□ 0.33
HERPUD1-219ENST00000570273 DPCR1Q3MIW9 517 aa17.09■□□□□ 0.33
HERPUD1-219ENST00000570273 ZNF484Q5JVG2 852 aa17.09■□□□□ 0.33
HERPUD1-219ENST00000570273 FAM102BQ5T8I3 360 aa17.09■□□□□ 0.33
HERPUD1-219ENST00000570273 FBXO46Q6PJ61 603 aaPredicted RBP17.09■□□□□ 0.33
HERPUD1-219ENST00000570273 RNF180Q86T96 592 aa17.09■□□□□ 0.33
HERPUD1-219ENST00000570273 MCPH1Q8NEM0 835 aa17.09■□□□□ 0.33
HERPUD1-219ENST00000570273 KLHDC9Q8NEP7 349 aa17.09■□□□□ 0.33
HERPUD1-219ENST00000570273 SLC7A3Q8WY07 619 aa17.09■□□□□ 0.33
HERPUD1-219ENST00000570273 DRC1Q96MC2 740 aa17.09■□□□□ 0.33
HERPUD1-219ENST00000570273 MTG1Q9BT17 334 aaPredicted RBP17.09■□□□□ 0.33
HERPUD1-219ENST00000570273 POLD4Q9HCU8 107 aa17.09■□□□□ 0.33
HERPUD1-219ENST00000570273 COL4A3BPQ9Y5P4 624 aa17.09■□□□□ 0.33
HERPUD1-219ENST00000570273 ZBTB42B2RXF5 422 aa17.08■□□□□ 0.32
HERPUD1-219ENST00000570273 IGBP1P78318 339 aa17.08■□□□□ 0.32
HERPUD1-219ENST00000570273 MAPK7Q13164 816 aa17.08■□□□□ 0.32
HERPUD1-219ENST00000570273 ANO6Q4KMQ2 910 aa17.08■□□□□ 0.32
HERPUD1-219ENST00000570273 HERC4Q5GLZ8 1057 aaPredicted RBP17.08■□□□□ 0.32
HERPUD1-219ENST00000570273 FAM26FQ5R3K3 315 aa17.08■□□□□ 0.32
HERPUD1-219ENST00000570273 ZNF658Q5TYW1 1059 aaPredicted RBP17.08■□□□□ 0.32
HERPUD1-219ENST00000570273 SFR1Q86XK3 245 aa17.08■□□□□ 0.32
HERPUD1-219ENST00000570273 TRAPPC12Q8WVT3 735 aa17.08■□□□□ 0.32
HERPUD1-219ENST00000570273 CEP89Q96ST8 783 aa17.08■□□□□ 0.32
HERPUD1-219ENST00000570273 DNAJC25Q9H1X3 360 aa17.08■□□□□ 0.32
HERPUD1-219ENST00000570273 DHX33Q9H6R0 707 aaKnown RBP17.08■□□□□ 0.32
HERPUD1-219ENST00000570273 PARVGQ9HBI0 331 aa17.08■□□□□ 0.32
HERPUD1-219ENST00000570273 GPRC5CQ9NQ84 441 aa17.08■□□□□ 0.32
HERPUD1-219ENST00000570273 XPNPEP1Q9NQW7 623 aa17.08■□□□□ 0.32
HERPUD1-219ENST00000570273 GDAQ9Y2T3 454 aa17.08■□□□□ 0.32
HERPUD1-219ENST00000570273 CCL5P13501 91 aa17.07■□□□□ 0.32
HERPUD1-219ENST00000570273 BMP6P22004 513 aa17.07■□□□□ 0.32
HERPUD1-219ENST00000570273 ZNF131P52739 623 aa17.07■□□□□ 0.32
HERPUD1-219ENST00000570273 EHHADHQ08426 723 aa17.07■□□□□ 0.32
HERPUD1-219ENST00000570273 LRRC41Q15345 812 aa17.07■□□□□ 0.32
HERPUD1-219ENST00000570273 MTFR1Q15390 333 aa17.07■□□□□ 0.32
HERPUD1-219ENST00000570273 GRIK4Q16099 956 aa17.07■□□□□ 0.32
HERPUD1-219ENST00000570273 KCNA10Q16322 511 aa17.07■□□□□ 0.32
HERPUD1-219ENST00000570273 LHX8Q68G74 356 aa17.07■□□□□ 0.32
HERPUD1-219ENST00000570273 CXCL17Q6UXB2 119 aa17.07■□□□□ 0.32
HERPUD1-219ENST00000570273 C11orf57Q6ZUT1 292 aaPredicted RBP17.07■□□□□ 0.32
HERPUD1-219ENST00000570273 EXOC8Q8IYI6 725 aa17.07■□□□□ 0.32
HERPUD1-219ENST00000570273 SMYD4Q8IYR2 804 aaPredicted RBP17.07■□□□□ 0.32
HERPUD1-219ENST00000570273 DAW1Q8N136 415 aa17.07■□□□□ 0.32
HERPUD1-219ENST00000570273 MYCT1Q8N699 235 aa17.07■□□□□ 0.32
HERPUD1-219ENST00000570273 PCSK9Q8NBP7 692 aaKnown RBP17.07■□□□□ 0.32
HERPUD1-219ENST00000570273 KIFAP3Q92845 792 aa17.07■□□□□ 0.32
HERPUD1-219ENST00000570273 HPS3Q969F9 1004 aa17.07■□□□□ 0.32
HERPUD1-219ENST00000570273 JPH2Q9BR39 696 aaPredicted RBP17.07■□□□□ 0.32
HERPUD1-219ENST00000570273 GTPBP4Q9BZE4 634 aaKnown RBP17.07■□□□□ 0.32
HERPUD1-219ENST00000570273 POLR3FQ9H1D9 316 aaPredicted RBP17.07■□□□□ 0.32
HERPUD1-219ENST00000570273 SFI1A8K8P3 1242 aa17.06■□□□□ 0.32
HERPUD1-219ENST00000570273 HAS3O00219 553 aa17.06■□□□□ 0.32
HERPUD1-219ENST00000570273 MAFO75444 373 aaPredicted RBP17.06■□□□□ 0.32
HERPUD1-219ENST00000570273 SMIM10L2AP0DMW4 78 aa17.06■□□□□ 0.32
HERPUD1-219ENST00000570273 SMIM10L2BP0DMW5 78 aa17.06■□□□□ 0.32
HERPUD1-219ENST00000570273 SOX10P56693 466 aa17.06■□□□□ 0.32
HERPUD1-219ENST00000570273 MLKLQ8NB16 471 aa17.06■□□□□ 0.32
HERPUD1-219ENST00000570273 SLC39A2Q9NP94 309 aa17.06■□□□□ 0.32
HERPUD1-219ENST00000570273 PDLIM7Q9NR12 457 aa17.06■□□□□ 0.32
HERPUD1-219ENST00000570273 TBC1D7Q9P0N9 293 aa17.06■□□□□ 0.32
HERPUD1-219ENST00000570273 SEL1LQ9UBV2 794 aa17.06■□□□□ 0.32
HERPUD1-219ENST00000570273 DACH1Q9UI36 760 aa17.06■□□□□ 0.32
HERPUD1-219ENST00000570273 RRN3P2A6NIE6 340 aa17.05■□□□□ 0.32
HERPUD1-219ENST00000570273 GAS2O43903 313 aaKnown RBP17.05■□□□□ 0.32
HERPUD1-219ENST00000570273 C22orf31O95567 290 aa17.05■□□□□ 0.32
HERPUD1-219ENST00000570273 ASGR1P07306 291 aa17.05■□□□□ 0.32
HERPUD1-219ENST00000570273 STK4Q13043 487 aa17.05■□□□□ 0.32
HERPUD1-219ENST00000570273 PSMD2Q13200 908 aa17.05■□□□□ 0.32
HERPUD1-219ENST00000570273 ODR4Q5SWX8 454 aa17.05■□□□□ 0.32
HERPUD1-219ENST00000570273 CCSAPQ6IQ19 270 aaPredicted RBP17.05■□□□□ 0.32
HERPUD1-219ENST00000570273 TNS4Q8IZW8 715 aa17.05■□□□□ 0.32
HERPUD1-219ENST00000570273 KIAA0895Q8NCT3 520 aa17.05■□□□□ 0.32
HERPUD1-219ENST00000570273 PPP1R13LQ8WUF5 828 aa17.05■□□□□ 0.32
HERPUD1-219ENST00000570273 TMEM143Q96AN5 459 aa17.05■□□□□ 0.32
HERPUD1-219ENST00000570273 RNF208Q9H0X6 261 aa17.05■□□□□ 0.32
HERPUD1-219ENST00000570273 PAK6Q9NQU5 681 aaPredicted RBP17.05■□□□□ 0.32
HERPUD1-219ENST00000570273 BRCA2P51587 3418 aa17.05■□□□□ 0.32
HERPUD1-219ENST00000570273 MAGEB2O15479 319 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 PLS3P13797 630 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 STIM1Q13586 685 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 LRRC71Q8N4P6 559 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 C7orf31Q8N865 590 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 RETREG2Q8NC44 543 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 ARRDC4Q8NCT1 418 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 LMBR1Q8WVP7 490 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 TCP11Q8WWU5 503 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 DEFB118Q96PH6 123 aa17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 NAT10Q9H0A0 1025 aaKnown RBP17.04■□□□□ 0.32
HERPUD1-219ENST00000570273 MRPL44Q9H9J2 332 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms