RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 PLA2G4FQ68DD2 849 aa10.73□□□□□ -0.69
HCCAT5-201ENST00000569990 EFCAB12Q6NXP0 572 aa10.73□□□□□ -0.69
HCCAT5-201ENST00000569990 FAM173BQ6P4H8 233 aa10.73□□□□□ -0.69
HCCAT5-201ENST00000569990 CNKSR3Q6P9H4 555 aa10.73□□□□□ -0.69
HCCAT5-201ENST00000569990 CATSPER3Q86XQ3 398 aa10.73□□□□□ -0.69
HCCAT5-201ENST00000569990 LRRC71Q8N4P6 559 aa10.73□□□□□ -0.69
HCCAT5-201ENST00000569990 METTL13Q8N6R0 699 aa10.73□□□□□ -0.69
HCCAT5-201ENST00000569990 PDCD7Q8N8D1 485 aaKnown RBP10.73□□□□□ -0.69
HCCAT5-201ENST00000569990 SPRYD3Q8NCJ5 442 aa10.73□□□□□ -0.69
HCCAT5-201ENST00000569990 ERMNQ8TAM6 284 aa10.73□□□□□ -0.69
HCCAT5-201ENST00000569990 MTIF3Q9H2K0 278 aaKnown RBP10.73□□□□□ -0.69
HCCAT5-201ENST00000569990 TUFT1Q9NNX1 390 aa10.73□□□□□ -0.69
HCCAT5-201ENST00000569990 CYP26B1Q9NR63 512 aa10.73□□□□□ -0.69
HCCAT5-201ENST00000569990 CXXC1Q9P0U4 656 aaPredicted RBP10.73□□□□□ -0.69
HCCAT5-201ENST00000569990 IGKV6-21A0A0C4DH24 114 aa10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 SOX1O00570 391 aaPredicted RBP10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 MAFO75444 373 aaPredicted RBP10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 MED24O75448 989 aa10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 BMP15O95972 392 aa10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 GHRP10912 638 aa10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 ACTN1P12814 892 aa10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 PDIA4P13667 645 aaKnown RBP10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 RPA1P27694 616 aa10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 TMOD1P28289 359 aa10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 FXR1P51114 621 aaKnown RBP eCLIP10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 FBXO47Q5MNV8 452 aa10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 ARL6IP4Q66PJ3 421 aaKnown RBP10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 DTHD1Q6ZMT9 781 aa10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 OTUD6AQ7L8S5 288 aa10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 DBF4BQ8NFT6 615 aa10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 CEP170P1Q96L14 293 aa10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 POLR3CQ9BUI4 534 aaPredicted RBP10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 CELF4Q9BZC1 486 aaKnown RBP10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 RAB34Q9BZG1 259 aa10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 ZSCAN16Q9H4T2 348 aaPredicted RBP10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 ANKEF1Q9NU02 776 aa10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 LRWD1Q9UFC0 647 aa10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 PPME1Q9Y570 386 aa10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 TRPV2Q9Y5S1 764 aa10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 KDM3AQ9Y4C1 1321 aa10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 SIP14410 1827 aa10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 TET1Q8NFU7 2136 aa10.72□□□□□ -0.69
HCCAT5-201ENST00000569990 LAMA2P24043 3122 aaKnown RBP10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 PP2D1A8MPX8 630 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 ZBBXA8MT70 800 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 M0QZ92 97 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 BAIAP3O94812 1187 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 VTNP04004 478 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 RARRES1P49788 294 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 VASPP50552 380 aaPredicted RBP10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 MMRN1Q13201 1228 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 DRP2Q13474 957 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 LPIN1Q14693 890 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 SF3A1Q15459 793 aaKnown RBP10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 ECM1Q16610 540 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 KIZQ2M2Z5 673 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 XKR9Q5GH70 373 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 HAUS3Q68CZ6 603 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 TSHZ1Q6ZSZ6 1077 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 SPNS2Q8IVW8 549 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 USP38Q8NB14 1042 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 PIGOQ8TEQ8 1089 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 MAP7D2Q96T17 732 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 JPH2Q9BR39 696 aaPredicted RBP10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 IFIH1Q9BYX4 1025 aaKnown RBP10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 DHX33Q9H6R0 707 aaKnown RBP10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 AGO3Q9H9G7 860 aaKnown RBP10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 SUGCTQ9HAC7 445 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 CDHR5Q9HBB8 845 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 AKT3Q9Y243 479 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 STK24Q9Y6E0 443 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 SQORQ9Y6N5 450 aa10.71□□□□□ -0.69
HCCAT5-201ENST00000569990 A0A087WWV3 80 aa10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 ABHD14A-ACY1A0A1B0GW23 586 aa10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 VWA3AA6NCI4 1184 aa10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 EFCAB14O75071 495 aa10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 GPR32O75388 356 aa10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 ZSCAN22P10073 491 aaPredicted RBP10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 XRCC6P12956 609 aaKnown RBP eCLIP10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 MUTP22033 750 aa10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 CDC25AP30304 524 aa10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 CCT6AP40227 531 aaKnown RBP10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 RFC5P40937 340 aa10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 GPC3P51654 580 aa10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 CRYBB1P53674 252 aaPredicted RBP10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 POLGP54098 1239 aaPredicted RBP10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 WDR5P61964 334 aaKnown RBP10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 SMAD3P84022 425 aaKnown RBP10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 PKP1Q13835 747 aa10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 IKBKEQ14164 716 aa10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 BECN1Q14457 450 aa10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 PTPAQ15257 358 aa10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 FAM109BQ6ICB4 259 aaPredicted RBP10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 ZNF710Q8N1W2 664 aa10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 SNX29Q8TEQ0 813 aa10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 TMEM40Q8WWA1 233 aa10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 SLC7A3Q8WY07 619 aa10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 SEPT8Q92599 483 aa10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 LRCH3Q96II8 777 aa10.7□□□□□ -0.7
HCCAT5-201ENST00000569990 NACC1Q96RE7 527 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms