RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 KIZQ2M2Z5 673 aa14.63□□□□□ -0.07
CNOT1-220ENST00000569916 TMEM266Q2M3C6 531 aa14.63□□□□□ -0.07
CNOT1-220ENST00000569916 PLA2G4FQ68DD2 849 aa14.63□□□□□ -0.07
CNOT1-220ENST00000569916 SP7Q8TDD2 431 aaPredicted RBP14.63□□□□□ -0.07
CNOT1-220ENST00000569916 MTMR9Q96QG7 549 aa14.63□□□□□ -0.07
CNOT1-220ENST00000569916 MAP7D2Q96T17 732 aa14.63□□□□□ -0.07
CNOT1-220ENST00000569916 OSMRQ99650 979 aa14.63□□□□□ -0.07
CNOT1-220ENST00000569916 SH2D3AQ9BRG2 576 aa14.63□□□□□ -0.07
CNOT1-220ENST00000569916 LXNQ9BS40 222 aa14.63□□□□□ -0.07
CNOT1-220ENST00000569916 TMEM60Q9H2L4 133 aa14.63□□□□□ -0.07
CNOT1-220ENST00000569916 AKT3Q9Y243 479 aa14.63□□□□□ -0.07
CNOT1-220ENST00000569916 NOC2LQ9Y3T9 749 aaKnown RBP14.63□□□□□ -0.07
CNOT1-220ENST00000569916 INSL6Q9Y581 213 aa14.63□□□□□ -0.07
CNOT1-220ENST00000569916 TRANK1O15050 2925 aa14.63□□□□□ -0.07
CNOT1-220ENST00000569916 MYO9BQ13459 2157 aa14.63□□□□□ -0.07
CNOT1-220ENST00000569916 IGKV6-21A0A0C4DH24 114 aa14.62□□□□□ -0.07
CNOT1-220ENST00000569916 DDX11L8A8MPP1 907 aa14.62□□□□□ -0.07
CNOT1-220ENST00000569916 ENPP3O14638 875 aa14.62□□□□□ -0.07
CNOT1-220ENST00000569916 UPP2O95045 317 aa14.62□□□□□ -0.07
CNOT1-220ENST00000569916 ATP2B1P20020 1258 aa14.62□□□□□ -0.07
CNOT1-220ENST00000569916 TMOD1P28289 359 aa14.62□□□□□ -0.07
CNOT1-220ENST00000569916 MCM7P33993 719 aa14.62□□□□□ -0.07
CNOT1-220ENST00000569916 CRYBB1P53674 252 aaPredicted RBP14.62□□□□□ -0.07
CNOT1-220ENST00000569916 DRP2Q13474 957 aa14.62□□□□□ -0.07
CNOT1-220ENST00000569916 RTN4RL1Q86UN2 441 aaPredicted RBP14.62□□□□□ -0.07
CNOT1-220ENST00000569916 NOSTRINQ8IVI9 506 aa14.62□□□□□ -0.07
CNOT1-220ENST00000569916 ARNTL2Q8WYA1 636 aa14.62□□□□□ -0.07
CNOT1-220ENST00000569916 DYDC2Q96IM9 177 aa14.62□□□□□ -0.07
CNOT1-220ENST00000569916 FTHL17Q9BXU8 183 aa14.62□□□□□ -0.07
CNOT1-220ENST00000569916 TMX1Q9H3N1 280 aa14.62□□□□□ -0.07
CNOT1-220ENST00000569916 TTC12Q9H892 705 aaPredicted RBP14.62□□□□□ -0.07
CNOT1-220ENST00000569916 SUGCTQ9HAC7 445 aa14.62□□□□□ -0.07
CNOT1-220ENST00000569916 ERVK-5Q9HDB9 667 aa14.62□□□□□ -0.07
CNOT1-220ENST00000569916 RGL1Q9NZL6 768 aa14.62□□□□□ -0.07
CNOT1-220ENST00000569916 PCDHA12Q9UN75 941 aa14.62□□□□□ -0.07
CNOT1-220ENST00000569916 RFXAPO00287 272 aa14.61□□□□□ -0.07
CNOT1-220ENST00000569916 DKC1O60832 514 aaKnown RBP eCLIP14.61□□□□□ -0.07
CNOT1-220ENST00000569916 RPS6KA5O75582 802 aa14.61□□□□□ -0.07
CNOT1-220ENST00000569916 U2AF2P26368 475 aaKnown RBP eCLIP14.61□□□□□ -0.07
CNOT1-220ENST00000569916 TXKP42681 527 aa14.61□□□□□ -0.07
CNOT1-220ENST00000569916 NLRP11P59045 1033 aaKnown RBP14.61□□□□□ -0.07
CNOT1-220ENST00000569916 CYP4A11Q02928 519 aa14.61□□□□□ -0.07
CNOT1-220ENST00000569916 ORC2Q13416 577 aaPredicted RBP14.61□□□□□ -0.07
CNOT1-220ENST00000569916 GNL2Q13823 731 aaKnown RBP14.61□□□□□ -0.07
CNOT1-220ENST00000569916 FAM228AQ86W67 206 aa14.61□□□□□ -0.07
CNOT1-220ENST00000569916 C4orf19Q8IY42 314 aa14.61□□□□□ -0.07
CNOT1-220ENST00000569916 YME1L1Q96TA2 773 aa14.61□□□□□ -0.07
CNOT1-220ENST00000569916 TSPYL2Q9H2G4 693 aaPredicted RBP14.61□□□□□ -0.07
CNOT1-220ENST00000569916 ADAMTS10Q9H324 1103 aa14.61□□□□□ -0.07
CNOT1-220ENST00000569916 RC3H2Q9HBD1 1191 aaKnown RBP14.61□□□□□ -0.07
CNOT1-220ENST00000569916 CYP26B1Q9NR63 512 aa14.61□□□□□ -0.07
CNOT1-220ENST00000569916 KIF3AQ9Y496 699 aa14.61□□□□□ -0.07
CNOT1-220ENST00000569916 GTF3C3Q9Y5Q9 886 aa14.61□□□□□ -0.07
CNOT1-220ENST00000569916 FNDC1Q4ZHG4 1894 aaPredicted RBP14.61□□□□□ -0.07
CNOT1-220ENST00000569916 ATG2AQ2TAZ0 1938 aa14.6□□□□□ -0.07
CNOT1-220ENST00000569916 POTEMA6NI47 508 aa14.6□□□□□ -0.07
CNOT1-220ENST00000569916 MGEA5O60502 916 aa14.6□□□□□ -0.07
CNOT1-220ENST00000569916 MAFO75444 373 aaPredicted RBP14.6□□□□□ -0.07
CNOT1-220ENST00000569916 GJB2P29033 226 aa14.6□□□□□ -0.07
CNOT1-220ENST00000569916 TRAPPC10P48553 1259 aa14.6□□□□□ -0.07
CNOT1-220ENST00000569916 GPC3P51654 580 aa14.6□□□□□ -0.07
CNOT1-220ENST00000569916 NPEPPSP55786 919 aa14.6□□□□□ -0.07
CNOT1-220ENST00000569916 ERVK-21P61565 698 aa14.6□□□□□ -0.07
CNOT1-220ENST00000569916 NFX1Q12986 1120 aaKnown RBP14.6□□□□□ -0.07
CNOT1-220ENST00000569916 CTTNQ14247 550 aaKnown RBP14.6□□□□□ -0.07
CNOT1-220ENST00000569916 TTC38Q5R3I4 469 aa14.6□□□□□ -0.07
CNOT1-220ENST00000569916 CRIPAKQ8N1N5 446 aa14.6□□□□□ -0.07
CNOT1-220ENST00000569916 ZNF579Q8NAF0 562 aaKnown RBP14.6□□□□□ -0.07
CNOT1-220ENST00000569916 ZNF668Q96K58 619 aaPredicted RBP14.6□□□□□ -0.07
CNOT1-220ENST00000569916 TGS1Q96RS0 853 aaKnown RBP14.6□□□□□ -0.07
CNOT1-220ENST00000569916 EIF2AK1Q9BQI3 630 aaKnown RBP14.6□□□□□ -0.07
CNOT1-220ENST00000569916 ZSWIM4Q9H7M6 989 aa14.6□□□□□ -0.07
CNOT1-220ENST00000569916 GPR182O15218 404 aa14.59□□□□□ -0.07
CNOT1-220ENST00000569916 LPXNO60711 386 aa14.59□□□□□ -0.07
CNOT1-220ENST00000569916 SLITRK3O94933 977 aa14.59□□□□□ -0.07
CNOT1-220ENST00000569916 LYPLA2O95372 231 aa14.59□□□□□ -0.07
CNOT1-220ENST00000569916 OR52Z1P0C646 297 aa14.59□□□□□ -0.07
CNOT1-220ENST00000569916 IGFBP4P22692 258 aa14.59□□□□□ -0.07
CNOT1-220ENST00000569916 YWHABP31946 246 aaKnown RBP14.59□□□□□ -0.07
CNOT1-220ENST00000569916 NBR1Q14596 966 aa14.59□□□□□ -0.07
CNOT1-220ENST00000569916 ZNF174Q15697 407 aa14.59□□□□□ -0.07
CNOT1-220ENST00000569916 ODR4Q5SWX8 454 aa14.59□□□□□ -0.07
CNOT1-220ENST00000569916 FAM43BQ6ZT52 329 aaPredicted RBP14.59□□□□□ -0.07
CNOT1-220ENST00000569916 ZNF710Q8N1W2 664 aa14.59□□□□□ -0.07
CNOT1-220ENST00000569916 NEK9Q8TD19 979 aa14.59□□□□□ -0.07
CNOT1-220ENST00000569916 CEP170P1Q96L14 293 aa14.59□□□□□ -0.07
CNOT1-220ENST00000569916 HSD17B14Q9BPX1 270 aa14.59□□□□□ -0.07
CNOT1-220ENST00000569916 C17orf80Q9BSJ5 609 aa14.59□□□□□ -0.07
CNOT1-220ENST00000569916 MTUS1Q9ULD2 1270 aa14.59□□□□□ -0.07
CNOT1-220ENST00000569916 NOL7Q9UMY1 257 aaKnown RBP14.59□□□□□ -0.07
CNOT1-220ENST00000569916 ST3GAL5Q9UNP4 418 aa14.59□□□□□ -0.07
CNOT1-220ENST00000569916 PPME1Q9Y570 386 aa14.59□□□□□ -0.07
CNOT1-220ENST00000569916 ADGRA3Q8IWK6 1321 aa14.59□□□□□ -0.07
CNOT1-220ENST00000569916 ZBTB39O15060 712 aa14.58□□□□□ -0.08
CNOT1-220ENST00000569916 DARSP14868 501 aaKnown RBP14.58□□□□□ -0.08
CNOT1-220ENST00000569916 EIF4BP23588 611 aaKnown RBP14.58□□□□□ -0.08
CNOT1-220ENST00000569916 TOB1P50616 345 aaPredicted RBP14.58□□□□□ -0.08
CNOT1-220ENST00000569916 GRB10Q13322 594 aa14.58□□□□□ -0.08
CNOT1-220ENST00000569916 NPAS4Q8IUM7 802 aa14.58□□□□□ -0.08
CNOT1-220ENST00000569916 TPH2Q8IWU9 490 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms