RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 SP2Q02086 613 aa11.16□□□□□ -0.62
GDE1-205ENST00000569899 SP4Q02446 784 aa11.16□□□□□ -0.62
GDE1-205ENST00000569899 NT5DC1Q5TFE4 455 aa11.16□□□□□ -0.62
GDE1-205ENST00000569899 NPLOC4Q8TAT6 608 aa11.16□□□□□ -0.62
GDE1-205ENST00000569899 HSD17B14Q9BPX1 270 aa11.16□□□□□ -0.62
GDE1-205ENST00000569899 LXNQ9BS40 222 aa11.16□□□□□ -0.62
GDE1-205ENST00000569899 JPH1Q9HDC5 661 aaPredicted RBP11.16□□□□□ -0.62
GDE1-205ENST00000569899 TUFT1Q9NNX1 390 aa11.16□□□□□ -0.62
GDE1-205ENST00000569899 ANO10Q9NW15 660 aa11.16□□□□□ -0.62
GDE1-205ENST00000569899 TCEAL9Q9UHQ7 104 aa11.16□□□□□ -0.62
GDE1-205ENST00000569899 SAMM50Q9Y512 469 aa11.16□□□□□ -0.62
GDE1-205ENST00000569899 LOC102724159A0A0B4J2E5 919 aa11.15□□□□□ -0.62
GDE1-205ENST00000569899 MYMKA6NI61 221 aa11.15□□□□□ -0.62
GDE1-205ENST00000569899 ASB14A6NK59 587 aa11.15□□□□□ -0.62
GDE1-205ENST00000569899 WDR64B1ANS9 1081 aa11.15□□□□□ -0.62
GDE1-205ENST00000569899 SLITRK3O94933 977 aa11.15□□□□□ -0.62
GDE1-205ENST00000569899 SMC2O95347 1197 aa11.15□□□□□ -0.62
GDE1-205ENST00000569899 SSBP05455 408 aaKnown RBP eCLIP11.15□□□□□ -0.62
GDE1-205ENST00000569899 BMP6P22004 513 aa11.15□□□□□ -0.62
GDE1-205ENST00000569899 CTGFP29279 349 aa11.15□□□□□ -0.62
GDE1-205ENST00000569899 PWP2Q15269 919 aaKnown RBP11.15□□□□□ -0.62
GDE1-205ENST00000569899 UGCGQ16739 394 aa11.15□□□□□ -0.62
GDE1-205ENST00000569899 INTS6LQ5JSJ4 861 aaKnown RBP11.15□□□□□ -0.62
GDE1-205ENST00000569899 SV2BQ7L1I2 683 aa11.15□□□□□ -0.62
GDE1-205ENST00000569899 DPP9Q86TI2 863 aa11.15□□□□□ -0.62
GDE1-205ENST00000569899 TPH2Q8IWU9 490 aa11.15□□□□□ -0.62
GDE1-205ENST00000569899 NEK9Q8TD19 979 aa11.15□□□□□ -0.62
GDE1-205ENST00000569899 MAML3Q96JK9 1138 aa11.15□□□□□ -0.62
GDE1-205ENST00000569899 TRIM9Q9C026 710 aa11.15□□□□□ -0.62
GDE1-205ENST00000569899 GRPEL1Q9HAV7 217 aa11.15□□□□□ -0.62
GDE1-205ENST00000569899 SLC9A2Q9UBY0 812 aa11.15□□□□□ -0.62
GDE1-205ENST00000569899 KLRC4O43908 158 aa11.14□□□□□ -0.63
GDE1-205ENST00000569899 RPN1P04843 607 aaKnown RBP11.14□□□□□ -0.63
GDE1-205ENST00000569899 PLA2G4BP0C869 781 aa11.14□□□□□ -0.63
GDE1-205ENST00000569899 JAK3P52333 1124 aa11.14□□□□□ -0.63
GDE1-205ENST00000569899 RAB15P59190 212 aa11.14□□□□□ -0.63
GDE1-205ENST00000569899 ASIC1P78348 528 aa11.14□□□□□ -0.63
GDE1-205ENST00000569899 MORC3Q14149 939 aa11.14□□□□□ -0.63
GDE1-205ENST00000569899 ZNF746Q6NUN9 644 aaPredicted RBP11.14□□□□□ -0.63
GDE1-205ENST00000569899 CYFIP1Q7L576 1253 aa11.14□□□□□ -0.63
GDE1-205ENST00000569899 PIGOQ8TEQ8 1089 aa11.14□□□□□ -0.63
GDE1-205ENST00000569899 TNPO2O14787 897 aaKnown RBP11.13□□□□□ -0.63
GDE1-205ENST00000569899 ZBTB39O15060 712 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 FARP2O94887 1054 aaPredicted RBP11.13□□□□□ -0.63
GDE1-205ENST00000569899 GGPS1O95749 300 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 MYL1P05976 194 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 P4HBP07237 508 aaKnown RBP11.13□□□□□ -0.63
GDE1-205ENST00000569899 PTGS1P23219 599 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 SFNP31947 248 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 VEGFBP49765 207 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 SLC12A3P55017 1021 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 ACTR2P61160 394 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 LY6KQ17RY6 165 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 DYMQ7RTS9 669 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 GPBP1Q86WP2 473 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 RNF135Q8IUD6 432 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 TRIML1Q8N9V2 468 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 FAM200AQ8TCP9 573 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 GSDMAQ96QA5 445 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 C7orf25Q9BPX7 421 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 SENP7Q9BQF6 1050 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 ARHGAP39Q9C0H5 1083 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 KATNBL1Q9H079 304 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 BHMT2Q9H2M3 363 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 CBX8Q9HC52 389 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 PDGFCQ9NRA1 345 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 DNM3Q9UQ16 869 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 DIS3Q9Y2L1 958 aaKnown RBP11.13□□□□□ -0.63
GDE1-205ENST00000569899 NPHP3-ACAD11A0A0J9YXS1 232 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 EYA4O95677 639 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 SNAI1O95863 264 aaPredicted RBP11.13□□□□□ -0.63
GDE1-205ENST00000569899 SMPD1P17405 629 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 CYP11B2P19099 503 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 MUTP22033 750 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 ZNF165P49910 485 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 AMPD3Q01432 767 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 TMEM63BQ5T3F8 832 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 MAMDC4Q6UXC1 1216 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 LUZP1Q86V48 1076 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 CCDC60Q8IWA6 550 aaPredicted RBP11.13□□□□□ -0.63
GDE1-205ENST00000569899 SMAP1Q8IYB5 467 aaPredicted RBP11.13□□□□□ -0.63
GDE1-205ENST00000569899 SMYD4Q8IYR2 804 aaPredicted RBP11.13□□□□□ -0.63
GDE1-205ENST00000569899 RDM1Q8NG50 284 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 USP6NLQ92738 828 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 VTA1Q9NP79 307 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 DDX41Q9UJV9 622 aaKnown RBP11.13□□□□□ -0.63
GDE1-205ENST00000569899 PCDHA10Q9Y5I2 948 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 WASF2Q9Y6W5 498 aa11.13□□□□□ -0.63
GDE1-205ENST00000569899 SYNGAP1Q96PV0 1343 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 IGSF9BQ9UPX0 1349 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 TMEM150BA6NC51 233 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 TBC1D8O95759 1140 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 SUPT20HL2P0C7V6 817 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 CYP2B6P20813 491 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 QARSP47897 775 aaKnown RBP11.12□□□□□ -0.63
GDE1-205ENST00000569899 MRE11P49959 708 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 RAD51AP2Q09MP3 1159 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 NEDD9Q14511 834 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 CCL14Q16627 93 aa11.12□□□□□ -0.63
GDE1-205ENST00000569899 TAPT1Q6NXT6 567 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms