RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 CCDC85BQ15834 202 aaPredicted RBP17.86■□□□□ 0.45
USB1-215ENST00000569252 GRIK4Q16099 956 aa17.86■□□□□ 0.45
USB1-215ENST00000569252 MTERF2Q49AM1 385 aa17.86■□□□□ 0.45
USB1-215ENST00000569252 HYIQ5T013 277 aa17.86■□□□□ 0.45
USB1-215ENST00000569252 SHC4Q6S5L8 630 aa17.86■□□□□ 0.45
USB1-215ENST00000569252 PDILTQ8N807 584 aa17.86■□□□□ 0.45
USB1-215ENST00000569252 FSIP1Q8NA03 581 aa17.86■□□□□ 0.45
USB1-215ENST00000569252 RETREG2Q8NC44 543 aa17.86■□□□□ 0.45
USB1-215ENST00000569252 PIGOQ8TEQ8 1089 aa17.86■□□□□ 0.45
USB1-215ENST00000569252 TIFAQ96CG3 184 aa17.86■□□□□ 0.45
USB1-215ENST00000569252 MMTAG2Q9BU76 263 aaKnown RBP17.86■□□□□ 0.45
USB1-215ENST00000569252 HDAC6Q9UBN7 1215 aa17.86■□□□□ 0.45
USB1-215ENST00000569252 TBX21Q9UL17 535 aa17.86■□□□□ 0.45
USB1-215ENST00000569252 KCNH3Q9ULD8 1083 aa17.86■□□□□ 0.45
USB1-215ENST00000569252 UMODL1Q5DID0 1318 aa17.86■□□□□ 0.45
USB1-215ENST00000569252 CHD7Q9P2D1 2997 aa17.86■□□□□ 0.45
USB1-215ENST00000569252 REV3LO60673 3130 aa17.86■□□□□ 0.45
USB1-215ENST00000569252 GBF1Q92538 1859 aa17.86■□□□□ 0.45
USB1-215ENST00000569252 A0A1B0GVL5 298 aa17.85■□□□□ 0.45
USB1-215ENST00000569252 DCDC2CA8MYV0 355 aa17.85■□□□□ 0.45
USB1-215ENST00000569252 MAGEB2O15479 319 aa17.85■□□□□ 0.45
USB1-215ENST00000569252 POLR2DO15514 142 aaKnown RBP17.85■□□□□ 0.45
USB1-215ENST00000569252 SSBP05455 408 aaKnown RBP eCLIP17.85■□□□□ 0.45
USB1-215ENST00000569252 COL1A2P08123 1366 aa17.85■□□□□ 0.45
USB1-215ENST00000569252 TMOD1P28289 359 aa17.85■□□□□ 0.45
USB1-215ENST00000569252 UBE2HP62256 183 aa17.85■□□□□ 0.45
USB1-215ENST00000569252 TBC1D8BQ0IIM8 1120 aa17.85■□□□□ 0.45
USB1-215ENST00000569252 USP49Q70CQ1 688 aa17.85■□□□□ 0.45
USB1-215ENST00000569252 ANKRD33Q7Z3H0 272 aa17.85■□□□□ 0.45
USB1-215ENST00000569252 SESTD1Q86VW0 696 aa17.85■□□□□ 0.45
USB1-215ENST00000569252 CEP57L1Q8IYX8 460 aa17.85■□□□□ 0.45
USB1-215ENST00000569252 TMEM87AQ8NBN3 555 aa17.85■□□□□ 0.45
USB1-215ENST00000569252 SLC7A3Q8WY07 619 aa17.85■□□□□ 0.45
USB1-215ENST00000569252 PBX4Q9BYU1 374 aa17.85■□□□□ 0.45
USB1-215ENST00000569252 LRRC27Q9C0I9 530 aa17.85■□□□□ 0.45
USB1-215ENST00000569252 CYP26B1Q9NR63 512 aa17.85■□□□□ 0.45
USB1-215ENST00000569252 BMP2KQ9NSY1 1161 aaPredicted RBP17.85■□□□□ 0.45
USB1-215ENST00000569252 SETD4Q9NVD3 440 aa17.85■□□□□ 0.45
USB1-215ENST00000569252 DBR1Q9UK59 544 aaKnown RBP17.85■□□□□ 0.45
USB1-215ENST00000569252 EYA4O95677 639 aa17.84■□□□□ 0.45
USB1-215ENST00000569252 TIMP1P01033 207 aa17.84■□□□□ 0.45
USB1-215ENST00000569252 PLCG1P19174 1290 aa17.84■□□□□ 0.45
USB1-215ENST00000569252 CYP2C18P33260 490 aa17.84■□□□□ 0.45
USB1-215ENST00000569252 SYKP43405 635 aa17.84■□□□□ 0.45
USB1-215ENST00000569252 DNM2P50570 870 aa17.84■□□□□ 0.45
USB1-215ENST00000569252 POLGP54098 1239 aaPredicted RBP17.84■□□□□ 0.45
USB1-215ENST00000569252 AMPD3Q01432 767 aa17.84■□□□□ 0.45
USB1-215ENST00000569252 GRB10Q13322 594 aa17.84■□□□□ 0.45
USB1-215ENST00000569252 ADGRE1Q14246 886 aa17.84■□□□□ 0.45
USB1-215ENST00000569252 PTGISQ16647 500 aa17.84■□□□□ 0.45
USB1-215ENST00000569252 TMEM240Q5SV17 173 aa17.84■□□□□ 0.45
USB1-215ENST00000569252 ANO5Q75V66 913 aa17.84■□□□□ 0.45
USB1-215ENST00000569252 SV2BQ7L1I2 683 aa17.84■□□□□ 0.45
USB1-215ENST00000569252 CUEDC2Q9H467 287 aa17.84■□□□□ 0.45
USB1-215ENST00000569252 CXXC1Q9P0U4 656 aaPredicted RBP17.84■□□□□ 0.45
USB1-215ENST00000569252 STK17AQ9UEE5 414 aa17.84■□□□□ 0.45
USB1-215ENST00000569252 GTF2IRD1Q9UHL9 959 aa17.84■□□□□ 0.45
USB1-215ENST00000569252 USP25Q9UHP3 1055 aa17.84■□□□□ 0.45
USB1-215ENST00000569252 A0A087WWV3 80 aa17.83■□□□□ 0.44
USB1-215ENST00000569252 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.83■□□□□ 0.44
USB1-215ENST00000569252 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.83■□□□□ 0.44
USB1-215ENST00000569252 E9PMD0 336 aa17.83■□□□□ 0.44
USB1-215ENST00000569252 PLA2G4BP0C869 781 aa17.83■□□□□ 0.44
USB1-215ENST00000569252 KLRC1P26715 233 aa17.83■□□□□ 0.44
USB1-215ENST00000569252 RFC5P40937 340 aa17.83■□□□□ 0.44
USB1-215ENST00000569252 DHX8Q14562 1220 aaKnown RBP17.83■□□□□ 0.44
USB1-215ENST00000569252 ECM1Q16610 540 aa17.83■□□□□ 0.44
USB1-215ENST00000569252 TMEM119Q4V9L6 283 aa17.83■□□□□ 0.44
USB1-215ENST00000569252 PLA2G4FQ68DD2 849 aa17.83■□□□□ 0.44
USB1-215ENST00000569252 ZNF365Q70YC5 407 aa17.83■□□□□ 0.44
USB1-215ENST00000569252 RSPH3Q86UC2 560 aa17.83■□□□□ 0.44
USB1-215ENST00000569252 METTL13Q8N6R0 699 aa17.83■□□□□ 0.44
USB1-215ENST00000569252 DHX58Q96C10 678 aa17.83■□□□□ 0.44
USB1-215ENST00000569252 PNMA5Q96PV4 448 aa17.83■□□□□ 0.44
USB1-215ENST00000569252 BHMT2Q9H2M3 363 aa17.83■□□□□ 0.44
USB1-215ENST00000569252 WRAP73Q9P2S5 460 aaPredicted RBP17.83■□□□□ 0.44
USB1-215ENST00000569252 ZBTB39O15060 712 aa17.82■□□□□ 0.44
USB1-215ENST00000569252 DGAT1O75907 488 aa17.82■□□□□ 0.44
USB1-215ENST00000569252 RPLP2P05387 115 aaKnown RBP17.82■□□□□ 0.44
USB1-215ENST00000569252 KRT18P05783 430 aaKnown RBP17.82■□□□□ 0.44
USB1-215ENST00000569252 PFKFB1P16118 471 aa17.82■□□□□ 0.44
USB1-215ENST00000569252 RARRES1P49788 294 aa17.82■□□□□ 0.44
USB1-215ENST00000569252 NPEPPSP55786 919 aa17.82■□□□□ 0.44
USB1-215ENST00000569252 SLC43A3Q8NBI5 491 aa17.82■□□□□ 0.44
USB1-215ENST00000569252 PPP1R13LQ8WUF5 828 aa17.82■□□□□ 0.44
USB1-215ENST00000569252 LARP4BQ92615 738 aaKnown RBP17.82■□□□□ 0.44
USB1-215ENST00000569252 RAD54LQ92698 747 aa17.82■□□□□ 0.44
USB1-215ENST00000569252 SUGCTQ9HAC7 445 aa17.82■□□□□ 0.44
USB1-215ENST00000569252 HOOK1Q9UJC3 728 aaKnown RBP17.82■□□□□ 0.44
USB1-215ENST00000569252 TUBE1Q9UJT0 475 aa17.82■□□□□ 0.44
USB1-215ENST00000569252 GRIN2DO15399 1336 aa17.81■□□□□ 0.44
USB1-215ENST00000569252 TCHHQ07283 1943 aa17.81■□□□□ 0.44
USB1-215ENST00000569252 GAS2O43903 313 aaKnown RBP17.81■□□□□ 0.44
USB1-215ENST00000569252 STBD1O95210 358 aa17.81■□□□□ 0.44
USB1-215ENST00000569252 CYP2C9P11712 490 aa17.81■□□□□ 0.44
USB1-215ENST00000569252 PTMSP20962 102 aa17.81■□□□□ 0.44
USB1-215ENST00000569252 CDK7P50613 346 aa17.81■□□□□ 0.44
USB1-215ENST00000569252 NDUFA8P51970 172 aa17.81■□□□□ 0.44
USB1-215ENST00000569252 GDF6Q6KF10 455 aaPredicted RBP17.81■□□□□ 0.44
USB1-215ENST00000569252 MFSD5Q6N075 450 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms