RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 NFX1Q12986 1120 aaKnown RBP16.23■□□□□ 0.19
COMMD4-225ENST00000569245 PPP2R5CQ13362 524 aa16.23■□□□□ 0.19
COMMD4-225ENST00000569245 ADGRE1Q14246 886 aa16.23■□□□□ 0.19
COMMD4-225ENST00000569245 CALCRLQ16602 461 aa16.23■□□□□ 0.19
COMMD4-225ENST00000569245 KIZQ2M2Z5 673 aa16.23■□□□□ 0.19
COMMD4-225ENST00000569245 TMEM266Q2M3C6 531 aa16.23■□□□□ 0.19
COMMD4-225ENST00000569245 MTERF2Q49AM1 385 aa16.23■□□□□ 0.19
COMMD4-225ENST00000569245 XKR3Q5GH77 459 aa16.23■□□□□ 0.19
COMMD4-225ENST00000569245 NCAPH2Q6IBW4 605 aa16.23■□□□□ 0.19
COMMD4-225ENST00000569245 B3GNT9Q6UX72 402 aa16.23■□□□□ 0.19
COMMD4-225ENST00000569245 MICALL1Q8N3F8 863 aa16.23■□□□□ 0.19
COMMD4-225ENST00000569245 LRRC71Q8N4P6 559 aa16.23■□□□□ 0.19
COMMD4-225ENST00000569245 HAS1Q92839 578 aa16.23■□□□□ 0.19
COMMD4-225ENST00000569245 FTHL17Q9BXU8 183 aa16.23■□□□□ 0.19
COMMD4-225ENST00000569245 PADI3Q9ULW8 664 aa16.23■□□□□ 0.19
COMMD4-225ENST00000569245 MYH15Q9Y2K3 1946 aa16.23■□□□□ 0.19
COMMD4-225ENST00000569245 KDM3AQ9Y4C1 1321 aa16.22■□□□□ 0.19
COMMD4-225ENST00000569245 NEMFO60524 1076 aa16.22■□□□□ 0.19
COMMD4-225ENST00000569245 DKC1O60832 514 aaKnown RBP eCLIP16.22■□□□□ 0.19
COMMD4-225ENST00000569245 RPS6KA5O75582 802 aa16.22■□□□□ 0.19
COMMD4-225ENST00000569245 IBSPP21815 317 aaPredicted RBP16.22■□□□□ 0.19
COMMD4-225ENST00000569245 QARSP47897 775 aaKnown RBP16.22■□□□□ 0.19
COMMD4-225ENST00000569245 RESTQ13127 1097 aa16.22■□□□□ 0.19
COMMD4-225ENST00000569245 CCDC85BQ15834 202 aaPredicted RBP16.22■□□□□ 0.19
COMMD4-225ENST00000569245 SCLT1Q96NL6 688 aa16.22■□□□□ 0.19
COMMD4-225ENST00000569245 NIFKQ9BYG3 293 aaKnown RBP16.22■□□□□ 0.19
COMMD4-225ENST00000569245 FOXP1Q9H334 677 aaPredicted RBP16.22■□□□□ 0.19
COMMD4-225ENST00000569245 CDHR5Q9HBB8 845 aa16.22■□□□□ 0.19
COMMD4-225ENST00000569245 ATP6V1DQ9Y5K8 247 aa16.22■□□□□ 0.19
COMMD4-225ENST00000569245 LINC01553A4QN01 128 aa16.21■□□□□ 0.19
COMMD4-225ENST00000569245 TMEM150BA6NC51 233 aa16.21■□□□□ 0.19
COMMD4-225ENST00000569245 GTPBP6O43824 516 aaPredicted RBP16.21■□□□□ 0.19
COMMD4-225ENST00000569245 P4HBP07237 508 aaKnown RBP16.21■□□□□ 0.19
COMMD4-225ENST00000569245 U2AF2P26368 475 aaKnown RBP eCLIP16.21■□□□□ 0.19
COMMD4-225ENST00000569245 CRYBB1P53674 252 aaPredicted RBP16.21■□□□□ 0.19
COMMD4-225ENST00000569245 ODR4Q5SWX8 454 aa16.21■□□□□ 0.19
COMMD4-225ENST00000569245 CLEC17AQ6ZS10 378 aa16.21■□□□□ 0.19
COMMD4-225ENST00000569245 SPRED2Q7Z698 418 aa16.21■□□□□ 0.19
COMMD4-225ENST00000569245 TGS1Q96RS0 853 aaKnown RBP16.21■□□□□ 0.19
COMMD4-225ENST00000569245 OSMRQ99650 979 aa16.21■□□□□ 0.19
COMMD4-225ENST00000569245 SH2D3AQ9BRG2 576 aa16.21■□□□□ 0.19
COMMD4-225ENST00000569245 PCDHA12Q9UN75 941 aa16.21■□□□□ 0.19
COMMD4-225ENST00000569245 NOC2LQ9Y3T9 749 aaKnown RBP16.21■□□□□ 0.19
COMMD4-225ENST00000569245 PRUNE2Q8WUY3 3088 aa16.21■□□□□ 0.19
COMMD4-225ENST00000569245 EPOPA6NHQ4 379 aa16.2■□□□□ 0.18
COMMD4-225ENST00000569245 GPR182O15218 404 aa16.2■□□□□ 0.18
COMMD4-225ENST00000569245 MCM7P33993 719 aa16.2■□□□□ 0.18
COMMD4-225ENST00000569245 TXKP42681 527 aa16.2■□□□□ 0.18
COMMD4-225ENST00000569245 DNM2P50570 870 aa16.2■□□□□ 0.18
COMMD4-225ENST00000569245 NLRP11P59045 1033 aaKnown RBP16.2■□□□□ 0.18
COMMD4-225ENST00000569245 HTRA4P83105 476 aaPredicted RBP16.2■□□□□ 0.18
COMMD4-225ENST00000569245 EPHA7Q15375 998 aa16.2■□□□□ 0.18
COMMD4-225ENST00000569245 FOXD4L5Q5VV16 416 aaPredicted RBP16.2■□□□□ 0.18
COMMD4-225ENST00000569245 MCTP1Q6DN14 999 aa16.2■□□□□ 0.18
COMMD4-225ENST00000569245 BRAPQ7Z569 592 aa16.2■□□□□ 0.18
COMMD4-225ENST00000569245 FERMT3Q86UX7 667 aa16.2■□□□□ 0.18
COMMD4-225ENST00000569245 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.2■□□□□ 0.18
COMMD4-225ENST00000569245 FOXD4L4Q8WXT5 416 aaPredicted RBP16.2■□□□□ 0.18
COMMD4-225ENST00000569245 ST3GAL5Q9UNP4 418 aa16.2■□□□□ 0.18
COMMD4-225ENST00000569245 DENND3A2RUS2 1198 aa16.19■□□□□ 0.18
COMMD4-225ENST00000569245 GPR32O75388 356 aa16.19■□□□□ 0.18
COMMD4-225ENST00000569245 STBD1O95210 358 aa16.19■□□□□ 0.18
COMMD4-225ENST00000569245 ERVK-21P61565 698 aa16.19■□□□□ 0.18
COMMD4-225ENST00000569245 CYP4A11Q02928 519 aa16.19■□□□□ 0.18
COMMD4-225ENST00000569245 TARBP2Q15633 366 aaKnown RBP16.19■□□□□ 0.18
COMMD4-225ENST00000569245 PLA2G4FQ68DD2 849 aa16.19■□□□□ 0.18
COMMD4-225ENST00000569245 ANO5Q75V66 913 aa16.19■□□□□ 0.18
COMMD4-225ENST00000569245 TPH2Q8IWU9 490 aa16.19■□□□□ 0.18
COMMD4-225ENST00000569245 ZNF710Q8N1W2 664 aa16.19■□□□□ 0.18
COMMD4-225ENST00000569245 TMEM40Q8WWA1 233 aa16.19■□□□□ 0.18
COMMD4-225ENST00000569245 NLRP7Q8WX94 980 aa16.19■□□□□ 0.18
COMMD4-225ENST00000569245 DYDC2Q96IM9 177 aa16.19■□□□□ 0.18
COMMD4-225ENST00000569245 ZNF668Q96K58 619 aaPredicted RBP16.19■□□□□ 0.18
COMMD4-225ENST00000569245 LXNQ9BS40 222 aa16.19■□□□□ 0.18
COMMD4-225ENST00000569245 TSPYL2Q9H2G4 693 aaPredicted RBP16.19■□□□□ 0.18
COMMD4-225ENST00000569245 TMX1Q9H3N1 280 aa16.19■□□□□ 0.18
COMMD4-225ENST00000569245 TTC12Q9H892 705 aaPredicted RBP16.19■□□□□ 0.18
COMMD4-225ENST00000569245 ERVK-5Q9HDB9 667 aa16.19■□□□□ 0.18
COMMD4-225ENST00000569245 RGL1Q9NZL6 768 aa16.19■□□□□ 0.18
COMMD4-225ENST00000569245 LRFN2Q9ULH4 789 aa16.19■□□□□ 0.18
COMMD4-225ENST00000569245 TCHHQ07283 1943 aa16.19■□□□□ 0.18
COMMD4-225ENST00000569245 UNC80Q8N2C7 3258 aa16.18■□□□□ 0.18
COMMD4-225ENST00000569245 WNT7AO00755 349 aa16.18■□□□□ 0.18
COMMD4-225ENST00000569245 GRB10Q13322 594 aa16.18■□□□□ 0.18
COMMD4-225ENST00000569245 CTTNQ14247 550 aaKnown RBP16.18■□□□□ 0.18
COMMD4-225ENST00000569245 ZNF174Q15697 407 aa16.18■□□□□ 0.18
COMMD4-225ENST00000569245 OTUD6AQ7L8S5 288 aa16.18■□□□□ 0.18
COMMD4-225ENST00000569245 RTN4RL1Q86UN2 441 aaPredicted RBP16.18■□□□□ 0.18
COMMD4-225ENST00000569245 NOSTRINQ8IVI9 506 aa16.18■□□□□ 0.18
COMMD4-225ENST00000569245 LINC01465Q8N7H1 131 aa16.18■□□□□ 0.18
COMMD4-225ENST00000569245 LINC01599Q8WXQ3 324 aa16.18■□□□□ 0.18
COMMD4-225ENST00000569245 CEP170P1Q96L14 293 aa16.18■□□□□ 0.18
COMMD4-225ENST00000569245 JPH2Q9BR39 696 aaPredicted RBP16.18■□□□□ 0.18
COMMD4-225ENST00000569245 C17orf80Q9BSJ5 609 aa16.18■□□□□ 0.18
COMMD4-225ENST00000569245 ZSWIM4Q9H7M6 989 aa16.18■□□□□ 0.18
COMMD4-225ENST00000569245 CYP26B1Q9NR63 512 aa16.18■□□□□ 0.18
COMMD4-225ENST00000569245 GBF1Q92538 1859 aa16.18■□□□□ 0.18
COMMD4-225ENST00000569245 MAFO75444 373 aaPredicted RBP16.17■□□□□ 0.18
COMMD4-225ENST00000569245 STAG3L1P0CL83 205 aa16.17■□□□□ 0.18
COMMD4-225ENST00000569245 EIF4BP23588 611 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms