RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 NLRP7Q8WX94 980 aa14.3□□□□□ -0.12
CDT1-203ENST00000569140 CDK5RAP3Q96JB5 506 aa14.3□□□□□ -0.12
CDT1-203ENST00000569140 OSMRQ99650 979 aa14.3□□□□□ -0.12
CDT1-203ENST00000569140 POLR3CQ9BUI4 534 aaPredicted RBP14.3□□□□□ -0.12
CDT1-203ENST00000569140 DAXXQ9UER7 740 aaPredicted RBP14.3□□□□□ -0.12
CDT1-203ENST00000569140 STK24Q9Y6E0 443 aa14.3□□□□□ -0.12
CDT1-203ENST00000569140 ARID2Q68CP9 1835 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 CEP290O15078 2479 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 SOX1O00570 391 aaPredicted RBP14.29□□□□□ -0.12
CDT1-203ENST00000569140 USO1O60763 962 aaKnown RBP14.29□□□□□ -0.12
CDT1-203ENST00000569140 MAFO75444 373 aaPredicted RBP14.29□□□□□ -0.12
CDT1-203ENST00000569140 BAIAP3O94812 1187 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 SPATA31C1P0DKV0 1188 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 RPA1P27694 616 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 MARCKSP29966 332 aaPredicted RBP14.29□□□□□ -0.12
CDT1-203ENST00000569140 CDC25AP30304 524 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 CD52P31358 61 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 NLRP11P59045 1033 aaKnown RBP14.29□□□□□ -0.12
CDT1-203ENST00000569140 NFX1Q12986 1120 aaKnown RBP14.29□□□□□ -0.12
CDT1-203ENST00000569140 DRP2Q13474 957 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 PKP1Q13835 747 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 PDIA5Q14554 519 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 LPIN1Q14693 890 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 IL17AQ16552 155 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 TCTN1Q2MV58 587 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 FBXO47Q5MNV8 452 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 ARL6IP4Q66PJ3 421 aaKnown RBP14.29□□□□□ -0.12
CDT1-203ENST00000569140 TSHZ1Q6ZSZ6 1077 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 RHPN2Q8IUC4 686 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 TMEM143Q96AN5 459 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 VWCEQ96DN2 955 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 LRCH3Q96II8 777 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 ZNF396Q96N95 335 aaPredicted RBP14.29□□□□□ -0.12
CDT1-203ENST00000569140 NACC1Q96RE7 527 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 MTRQ99707 1265 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 OSBPL7Q9BZF2 842 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 ATP6V0A4Q9HBG4 840 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 DDX19AQ9NUU7 478 aaKnown RBP14.29□□□□□ -0.12
CDT1-203ENST00000569140 SUCLA2Q9P2R7 463 aaPredicted RBP14.29□□□□□ -0.12
CDT1-203ENST00000569140 KIAA1024Q9UPX6 916 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 EVPLQ92817 2033 aa14.29□□□□□ -0.12
CDT1-203ENST00000569140 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.28□□□□□ -0.12
CDT1-203ENST00000569140 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.28□□□□□ -0.12
CDT1-203ENST00000569140 ARHGEF35A5YM69 484 aa14.28□□□□□ -0.12
CDT1-203ENST00000569140 GRXCR1A8MXD5 290 aa14.28□□□□□ -0.12
CDT1-203ENST00000569140 LYPLA2O95372 231 aa14.28□□□□□ -0.12
CDT1-203ENST00000569140 F13A1P00488 732 aa14.28□□□□□ -0.12
CDT1-203ENST00000569140 PDIA4P13667 645 aaKnown RBP14.28□□□□□ -0.12
CDT1-203ENST00000569140 ATP2A2P16615 1042 aaKnown RBP14.28□□□□□ -0.12
CDT1-203ENST00000569140 WDR5P61964 334 aaKnown RBP14.28□□□□□ -0.12
CDT1-203ENST00000569140 STK38Q15208 465 aa14.28□□□□□ -0.12
CDT1-203ENST00000569140 LRIT3Q3SXY7 679 aa14.28□□□□□ -0.12
CDT1-203ENST00000569140 PLEKHG4Q58EX7 1191 aa14.28□□□□□ -0.12
CDT1-203ENST00000569140 FAM109BQ6ICB4 259 aaPredicted RBP14.28□□□□□ -0.12
CDT1-203ENST00000569140 MAEAQ7L5Y9 396 aa14.28□□□□□ -0.12
CDT1-203ENST00000569140 EXOC8Q8IYI6 725 aa14.28□□□□□ -0.12
CDT1-203ENST00000569140 MYOCDQ8IZQ8 938 aa14.28□□□□□ -0.12
CDT1-203ENST00000569140 IGSF22Q8N9C0 903 aa14.28□□□□□ -0.12
CDT1-203ENST00000569140 APBB2Q92870 758 aa14.28□□□□□ -0.12
CDT1-203ENST00000569140 NLRP4Q96MN2 994 aa14.28□□□□□ -0.12
CDT1-203ENST00000569140 USP28Q96RU2 1077 aa14.28□□□□□ -0.12
CDT1-203ENST00000569140 PLIN2Q99541 437 aa14.28□□□□□ -0.12
CDT1-203ENST00000569140 ZBED2Q9BTP6 218 aa14.28□□□□□ -0.12
CDT1-203ENST00000569140 CDHR5Q9HBB8 845 aa14.28□□□□□ -0.12
CDT1-203ENST00000569140 ANKEF1Q9NU02 776 aa14.28□□□□□ -0.12
CDT1-203ENST00000569140 PPME1Q9Y570 386 aa14.28□□□□□ -0.12
CDT1-203ENST00000569140 MYH15Q9Y2K3 1946 aa14.27□□□□□ -0.12
CDT1-203ENST00000569140 KDM3AQ9Y4C1 1321 aa14.27□□□□□ -0.12
CDT1-203ENST00000569140 ABHD14A-ACY1A0A1B0GW23 586 aa14.27□□□□□ -0.13
CDT1-203ENST00000569140 EFCAB14O75071 495 aa14.27□□□□□ -0.13
CDT1-203ENST00000569140 RPS6KA5O75582 802 aa14.27□□□□□ -0.13
CDT1-203ENST00000569140 AMHP03971 560 aa14.27□□□□□ -0.13
CDT1-203ENST00000569140 SSBP05455 408 aaKnown RBP eCLIP14.27□□□□□ -0.13
CDT1-203ENST00000569140 RARRES1P49788 294 aa14.27□□□□□ -0.13
CDT1-203ENST00000569140 FXR1P51114 621 aaKnown RBP eCLIP14.27□□□□□ -0.13
CDT1-203ENST00000569140 RABGGTBP53611 331 aa14.27□□□□□ -0.13
CDT1-203ENST00000569140 CRYBB1P53674 252 aaPredicted RBP14.27□□□□□ -0.13
CDT1-203ENST00000569140 FAM117BQ6P1L5 589 aa14.27□□□□□ -0.13
CDT1-203ENST00000569140 CABP7Q86V35 215 aa14.27□□□□□ -0.13
CDT1-203ENST00000569140 LINC01465Q8N7H1 131 aa14.27□□□□□ -0.13
CDT1-203ENST00000569140 TCP11Q8WWU5 503 aa14.27□□□□□ -0.13
CDT1-203ENST00000569140 PSPC1Q8WXF1 523 aaKnown RBP14.27□□□□□ -0.13
CDT1-203ENST00000569140 CEP89Q96ST8 783 aa14.27□□□□□ -0.13
CDT1-203ENST00000569140 SLC9A7Q96T83 725 aa14.27□□□□□ -0.13
CDT1-203ENST00000569140 AGO3Q9H9G7 860 aaKnown RBP14.27□□□□□ -0.13
CDT1-203ENST00000569140 TFIP11Q9UBB9 837 aaKnown RBP14.27□□□□□ -0.13
CDT1-203ENST00000569140 GAS2O43903 313 aaKnown RBP14.26□□□□□ -0.13
CDT1-203ENST00000569140 GPR32O75388 356 aa14.26□□□□□ -0.13
CDT1-203ENST00000569140 DGAT1O75907 488 aa14.26□□□□□ -0.13
CDT1-203ENST00000569140 NCLP19338 710 aaKnown RBP14.26□□□□□ -0.13
CDT1-203ENST00000569140 UBA7P41226 1012 aa14.26□□□□□ -0.13
CDT1-203ENST00000569140 GPC3P51654 580 aa14.26□□□□□ -0.13
CDT1-203ENST00000569140 DEFB103AP81534 67 aa14.26□□□□□ -0.13
CDT1-203ENST00000569140 ECM1Q16610 540 aa14.26□□□□□ -0.13
CDT1-203ENST00000569140 ODR4Q5SWX8 454 aa14.26□□□□□ -0.13
CDT1-203ENST00000569140 RASIP1Q5U651 963 aa14.26□□□□□ -0.13
CDT1-203ENST00000569140 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.26□□□□□ -0.13
CDT1-203ENST00000569140 TMCO2Q7Z6W1 182 aaPredicted RBP14.26□□□□□ -0.13
CDT1-203ENST00000569140 KSR1Q8IVT5 923 aa14.26□□□□□ -0.13
CDT1-203ENST00000569140 USP38Q8NB14 1042 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms