RNA–Protein interactions for RNA: ENST00000569128.1

CDH11-216, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 781 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-216ENST00000569128 MCAMP43121 646 aa9.49□□□□□ -0.89
CDH11-216ENST00000569128 ZNF445P59923 1031 aa9.49□□□□□ -0.89
CDH11-216ENST00000569128 CCDC93Q567U6 631 aa9.49□□□□□ -0.89
CDH11-216ENST00000569128 ZC3H12BQ5HYM0 836 aaKnown RBP9.49□□□□□ -0.89
CDH11-216ENST00000569128 CCDC158Q5M9N0 1113 aa9.49□□□□□ -0.89
CDH11-216ENST00000569128 NIM1KQ8IY84 436 aa9.49□□□□□ -0.89
CDH11-216ENST00000569128 ZNF513Q8N8E2 541 aaPredicted RBP9.49□□□□□ -0.89
CDH11-216ENST00000569128 PMM1Q92871 262 aa9.49□□□□□ -0.89
CDH11-216ENST00000569128 TMX4Q9H1E5 349 aaPredicted RBP9.49□□□□□ -0.89
CDH11-216ENST00000569128 CAAP1Q9H8G2 361 aa9.49□□□□□ -0.89
CDH11-216ENST00000569128 WHRNQ9P202 907 aa9.49□□□□□ -0.89
CDH11-216ENST00000569128 LRP2BPQ9P2M1 347 aa9.49□□□□□ -0.89
CDH11-216ENST00000569128 JAG2Q9Y219 1238 aa9.49□□□□□ -0.89
CDH11-216ENST00000569128 ARAP2Q8WZ64 1704 aa9.48□□□□□ -0.89
CDH11-216ENST00000569128 SHISA3A0PJX4 238 aa9.48□□□□□ -0.89
CDH11-216ENST00000569128 CYP26A1O43174 497 aa9.48□□□□□ -0.89
CDH11-216ENST00000569128 GLRX3O76003 335 aaKnown RBP9.48□□□□□ -0.89
CDH11-216ENST00000569128 CHGBP05060 677 aa9.48□□□□□ -0.89
CDH11-216ENST00000569128 PRELPP51888 382 aa9.48□□□□□ -0.89
CDH11-216ENST00000569128 NMIQ13287 307 aaPredicted RBP9.48□□□□□ -0.89
CDH11-216ENST00000569128 AOC3Q16853 763 aa9.48□□□□□ -0.89
CDH11-216ENST00000569128 NKPD1Q17RQ9 610 aa9.48□□□□□ -0.89
CDH11-216ENST00000569128 CDKAL1Q5VV42 579 aa9.48□□□□□ -0.89
CDH11-216ENST00000569128 C15orf52Q6ZUT6 534 aaKnown RBP9.48□□□□□ -0.89
CDH11-216ENST00000569128 LRRN4CLQ8ND94 238 aa9.48□□□□□ -0.89
CDH11-216ENST00000569128 PIWIL2Q8TC59 973 aaKnown RBP9.48□□□□□ -0.89
CDH11-216ENST00000569128 RILPL2Q969X0 211 aa9.48□□□□□ -0.89
CDH11-216ENST00000569128 RTFDC1Q9BY42 306 aaPredicted RBP9.48□□□□□ -0.89
CDH11-216ENST00000569128 ZNF277Q9NRM2 450 aaPredicted RBP9.48□□□□□ -0.89
CDH11-216ENST00000569128 HMG20BQ9P0W2 317 aa9.48□□□□□ -0.89
CDH11-216ENST00000569128 MCM8Q9UJA3 840 aa9.48□□□□□ -0.89
CDH11-216ENST00000569128 AOX1Q06278 1338 aa9.48□□□□□ -0.89
CDH11-216ENST00000569128 COL1A1P02452 1464 aaPredicted RBP9.47□□□□□ -0.89
CDH11-216ENST00000569128 GOLIM4O00461 696 aa9.47□□□□□ -0.89
CDH11-216ENST00000569128 ERC2O15083 957 aa9.47□□□□□ -0.89
CDH11-216ENST00000569128 PRAMEF1O95521 474 aa9.47□□□□□ -0.89
CDH11-216ENST00000569128 IGHA1P01876 353 aa9.47□□□□□ -0.89
CDH11-216ENST00000569128 MYCLP1P12525 358 aaPredicted RBP9.47□□□□□ -0.89
CDH11-216ENST00000569128 YBX3P16989 372 aaKnown RBP eCLIP9.47□□□□□ -0.89
CDH11-216ENST00000569128 SOX5P35711 763 aa9.47□□□□□ -0.89
CDH11-216ENST00000569128 CHAF1AQ13111 956 aaPredicted RBP9.47□□□□□ -0.89
CDH11-216ENST00000569128 CPSF6Q16630 551 aaKnown RBP eCLIP9.47□□□□□ -0.89
CDH11-216ENST00000569128 CAVIN4Q5BKX8 364 aa9.47□□□□□ -0.89
CDH11-216ENST00000569128 RTKN2Q8IZC4 609 aa9.47□□□□□ -0.89
CDH11-216ENST00000569128 TDRD7Q8NHU6 1098 aaKnown RBP9.47□□□□□ -0.89
CDH11-216ENST00000569128 DSCC1Q9BVC3 393 aa9.47□□□□□ -0.89
CDH11-216ENST00000569128 FAM126AQ9BYI3 521 aaPredicted RBP9.47□□□□□ -0.89
CDH11-216ENST00000569128 ASCC2Q9H1I8 757 aaPredicted RBP9.47□□□□□ -0.89
CDH11-216ENST00000569128 CD209Q9NNX6 404 aa9.47□□□□□ -0.89
CDH11-216ENST00000569128 PIH1D3Q9NQM4 214 aaKnown RBP9.47□□□□□ -0.89
CDH11-216ENST00000569128 PLAGL2Q9UPG8 496 aa9.47□□□□□ -0.89
CDH11-216ENST00000569128 MED23Q9ULK4 1368 aa9.47□□□□□ -0.89
CDH11-216ENST00000569128 AKAP11Q9UKA4 1901 aa9.46□□□□□ -0.89
CDH11-216ENST00000569128 CCDC163A0A0D9SF12 145 aa9.46□□□□□ -0.9
CDH11-216ENST00000569128 PRR19A6NJB7 356 aa9.46□□□□□ -0.9
CDH11-216ENST00000569128 AGRPO00253 132 aa9.46□□□□□ -0.9
CDH11-216ENST00000569128 MEIS1O00470 390 aa9.46□□□□□ -0.9
CDH11-216ENST00000569128 SIGLEC6O43699 453 aa9.46□□□□□ -0.9
CDH11-216ENST00000569128 RFPL3O75679 317 aa9.46□□□□□ -0.9
CDH11-216ENST00000569128 CEACAM5P06731 702 aa9.46□□□□□ -0.9
CDH11-216ENST00000569128 ITGAVP06756 1048 aa9.46□□□□□ -0.9
CDH11-216ENST00000569128 FAM153BP0C7A2 387 aa9.46□□□□□ -0.9
CDH11-216ENST00000569128 UQCRFS1P1P0C7P4 283 aa9.46□□□□□ -0.9
CDH11-216ENST00000569128 PPP2R5DQ14738 602 aa9.46□□□□□ -0.9
CDH11-216ENST00000569128 C21orf62-AS1Q17RA5 79 aa9.46□□□□□ -0.9
CDH11-216ENST00000569128 CLEC16AQ2KHT3 1053 aa9.46□□□□□ -0.9
CDH11-216ENST00000569128 BMP2KLQ5H9B9 411 aa9.46□□□□□ -0.9
CDH11-216ENST00000569128 CCSAPQ6IQ19 270 aaPredicted RBP9.46□□□□□ -0.9
CDH11-216ENST00000569128 DDX42Q86XP3 938 aaKnown RBP eCLIP9.46□□□□□ -0.9
CDH11-216ENST00000569128 SPACA3Q8IXA5 215 aa9.46□□□□□ -0.9
CDH11-216ENST00000569128 PLD6Q8N2A8 252 aaKnown RBP9.46□□□□□ -0.9
CDH11-216ENST00000569128 SPATA5Q8NB90 893 aa9.46□□□□□ -0.9
CDH11-216ENST00000569128 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.46□□□□□ -0.9
CDH11-216ENST00000569128 SPATA9Q9BWV2 254 aa9.46□□□□□ -0.9
CDH11-216ENST00000569128 SEMA6BQ9H3T3 888 aa9.46□□□□□ -0.9
CDH11-216ENST00000569128 NOL6Q9H6R4 1146 aaKnown RBP9.46□□□□□ -0.9
CDH11-216ENST00000569128 DBNDD1Q9H9R9 158 aa9.46□□□□□ -0.9
CDH11-216ENST00000569128 MKNK2Q9HBH9 465 aa9.46□□□□□ -0.9
CDH11-216ENST00000569128 FHOD1Q9Y613 1164 aa9.46□□□□□ -0.9
CDH11-216ENST00000569128 COL4A5P29400 1685 aa9.45□□□□□ -0.9
CDH11-216ENST00000569128 CHD4Q14839 1912 aa9.45□□□□□ -0.9
CDH11-216ENST00000569128 A0A087X0B3 334 aa9.45□□□□□ -0.9
CDH11-216ENST00000569128 IQCA1LA6NCM1 817 aa9.45□□□□□ -0.9
CDH11-216ENST00000569128 PPIP5K2O43314 1243 aa9.45□□□□□ -0.9
CDH11-216ENST00000569128 FRAT2O75474 233 aaPredicted RBP9.45□□□□□ -0.9
CDH11-216ENST00000569128 IL1R1P14778 569 aa9.45□□□□□ -0.9
CDH11-216ENST00000569128 KIAA2012Q0VF49 1180 aa9.45□□□□□ -0.9
CDH11-216ENST00000569128 CT47A1Q5JQC4 288 aaPredicted RBP9.45□□□□□ -0.9
CDH11-216ENST00000569128 PRSS36Q5K4E3 855 aa9.45□□□□□ -0.9
CDH11-216ENST00000569128 ZNF804AQ7Z570 1209 aa9.45□□□□□ -0.9
CDH11-216ENST00000569128 ZNF227Q86WZ6 799 aa9.45□□□□□ -0.9
CDH11-216ENST00000569128 LRRC47Q8N1G4 583 aaKnown RBP9.45□□□□□ -0.9
CDH11-216ENST00000569128 FIBCD1Q8N539 461 aa9.45□□□□□ -0.9
CDH11-216ENST00000569128 BVESQ8NE79 360 aa9.45□□□□□ -0.9
CDH11-216ENST00000569128 SYTL5Q8TDW5 730 aaPredicted RBP9.45□□□□□ -0.9
CDH11-216ENST00000569128 HSPA12BQ96MM6 686 aa9.45□□□□□ -0.9
CDH11-216ENST00000569128 EYA3Q99504 573 aa9.45□□□□□ -0.9
CDH11-216ENST00000569128 MXD3Q9BW11 206 aa9.45□□□□□ -0.9
CDH11-216ENST00000569128 DUSP15Q9H1R2 295 aaPredicted RBP9.45□□□□□ -0.9
CDH11-216ENST00000569128 CHST7Q9NS84 486 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms