RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 TIGD1Q96MW7 591 aa11.65□□□□□ -0.54
CDH3-210ENST00000569117 NACC1Q96RE7 527 aa11.65□□□□□ -0.54
CDH3-210ENST00000569117 PLIN2Q99541 437 aa11.65□□□□□ -0.54
CDH3-210ENST00000569117 KATNAL1Q9BW62 490 aa11.65□□□□□ -0.54
CDH3-210ENST00000569117 MCOLN1Q9GZU1 580 aa11.65□□□□□ -0.54
CDH3-210ENST00000569117 RNF208Q9H0X6 261 aa11.65□□□□□ -0.54
CDH3-210ENST00000569117 DACT1Q9NYF0 836 aa11.65□□□□□ -0.54
CDH3-210ENST00000569117 DBR1Q9UK59 544 aaKnown RBP11.65□□□□□ -0.54
CDH3-210ENST00000569117 E9PMD0 336 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 H3BRB1 525 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 HAS3O00219 553 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 ZEB2O60315 1214 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 KINO60870 393 aaKnown RBP11.64□□□□□ -0.55
CDH3-210ENST00000569117 LILRB3O75022 631 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 GABBR2O75899 941 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 EYA4O95677 639 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 GJB1P08034 283 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 RARRES1P49788 294 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 PDE4CQ08493 712 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 PLCB4Q15147 1175 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 KLHL40Q2TBA0 621 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 TMCO4Q5TGY1 634 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 KRBA2Q6ZNG9 492 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 ANO5Q75V66 913 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 CEP57L1Q8IYX8 460 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 KAT2BQ92831 832 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 DEFB118Q96PH6 123 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 TSEN34Q9BSV6 310 aaKnown RBP11.64□□□□□ -0.55
CDH3-210ENST00000569117 TNMDQ9H2S6 317 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 TUT1Q9H6E5 874 aaKnown RBP11.64□□□□□ -0.55
CDH3-210ENST00000569117 ANKEF1Q9NU02 776 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 SEPT9Q9UHD8 586 aaPredicted RBP11.64□□□□□ -0.55
CDH3-210ENST00000569117 OGDHLQ9ULD0 1010 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 DNM3Q9UQ16 869 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 COL1A2P08123 1366 aa11.64□□□□□ -0.55
CDH3-210ENST00000569117 DNM1LO00429 736 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 ASGR1P07306 291 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 MYL3P08590 195 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 PLA2G4BP0C869 781 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 NDUFV2P19404 249 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 MARK3P27448 753 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 SLC12A3P55017 1021 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 PSMC6P62333 389 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 KCNA10Q16322 511 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 LONRF3Q496Y0 759 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 PLA2G4FQ68DD2 849 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 CKAP2LQ8IYA6 745 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 ZNF710Q8N1W2 664 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 ARRDC4Q8NCT1 418 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 CNNM3Q8NE01 707 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 PIGOQ8TEQ8 1089 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 CCDC34Q96HJ3 373 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 MTG1Q9BT17 334 aaPredicted RBP11.63□□□□□ -0.55
CDH3-210ENST00000569117 NIFKQ9BYG3 293 aaKnown RBP11.63□□□□□ -0.55
CDH3-210ENST00000569117 PANK2Q9BZ23 570 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 BHMT2Q9H2M3 363 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 KBTBD4Q9NVX7 518 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 SERTAD1Q9UHV2 236 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 PPME1Q9Y570 386 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 KAT6AQ92794 2004 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 MYH11P35749 1972 aa11.63□□□□□ -0.55
CDH3-210ENST00000569117 TMEM150BA6NC51 233 aa11.62□□□□□ -0.55
CDH3-210ENST00000569117 ZBTB42B2RXF5 422 aa11.62□□□□□ -0.55
CDH3-210ENST00000569117 KBTBD13C9JR72 458 aa11.62□□□□□ -0.55
CDH3-210ENST00000569117 HBP1O60381 514 aa11.62□□□□□ -0.55
CDH3-210ENST00000569117 CABYRO75952 493 aa11.62□□□□□ -0.55
CDH3-210ENST00000569117 MYCP01106 439 aaPredicted RBP11.62□□□□□ -0.55
CDH3-210ENST00000569117 MYL1P05976 194 aa11.62□□□□□ -0.55
CDH3-210ENST00000569117 PSEN2P49810 448 aa11.62□□□□□ -0.55
CDH3-210ENST00000569117 ACLYP53396 1101 aa11.62□□□□□ -0.55
CDH3-210ENST00000569117 TARBP2Q15633 366 aaKnown RBP11.62□□□□□ -0.55
CDH3-210ENST00000569117 KIAA0753Q2KHM9 967 aa11.62□□□□□ -0.55
CDH3-210ENST00000569117 SKOR2Q2VWA4 1001 aaPredicted RBP11.62□□□□□ -0.55
CDH3-210ENST00000569117 KANK3Q6NY19 840 aa11.62□□□□□ -0.55
CDH3-210ENST00000569117 CXCL17Q6UXB2 119 aa11.62□□□□□ -0.55
CDH3-210ENST00000569117 OTUD6AQ7L8S5 288 aa11.62□□□□□ -0.55
CDH3-210ENST00000569117 SH3RF1Q7Z6J0 888 aa11.62□□□□□ -0.55
CDH3-210ENST00000569117 ELOA2Q8IYF1 753 aaPredicted RBP11.62□□□□□ -0.55
CDH3-210ENST00000569117 SYT2Q8N9I0 419 aaPredicted RBP11.62□□□□□ -0.55
CDH3-210ENST00000569117 U2AF1L4Q8WU68 220 aaKnown RBP11.62□□□□□ -0.55
CDH3-210ENST00000569117 CCDC43Q96MW1 224 aaKnown RBP11.62□□□□□ -0.55
CDH3-210ENST00000569117 CEP89Q96ST8 783 aa11.62□□□□□ -0.55
CDH3-210ENST00000569117 MTRQ99707 1265 aa11.62□□□□□ -0.55
CDH3-210ENST00000569117 RNPEPQ9H4A4 650 aa11.62□□□□□ -0.55
CDH3-210ENST00000569117 CLSTN2Q9H4D0 955 aa11.62□□□□□ -0.55
CDH3-210ENST00000569117 CYP26B1Q9NR63 512 aa11.62□□□□□ -0.55
CDH3-210ENST00000569117 NRBP2Q9NSY0 501 aa11.62□□□□□ -0.55
CDH3-210ENST00000569117 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.62□□□□□ -0.55
CDH3-210ENST00000569117 KCND2Q9NZV8 630 aa11.62□□□□□ -0.55
CDH3-210ENST00000569117 PHF24Q9UPV7 400 aa11.62□□□□□ -0.55
CDH3-210ENST00000569117 ARHGEF35A5YM69 484 aa11.61□□□□□ -0.55
CDH3-210ENST00000569117 ZBTB39O15060 712 aa11.61□□□□□ -0.55
CDH3-210ENST00000569117 SGPL1O95470 568 aa11.61□□□□□ -0.55
CDH3-210ENST00000569117 CAPN2P17655 700 aa11.61□□□□□ -0.55
CDH3-210ENST00000569117 CYP11B2P19099 503 aa11.61□□□□□ -0.55
CDH3-210ENST00000569117 HOXC8P31273 242 aa11.61□□□□□ -0.55
CDH3-210ENST00000569117 GJA8P48165 433 aa11.61□□□□□ -0.55
CDH3-210ENST00000569117 XKR9Q5GH70 373 aa11.61□□□□□ -0.55
CDH3-210ENST00000569117 ZNF484Q5JVG2 852 aa11.61□□□□□ -0.55
CDH3-210ENST00000569117 CNNM4Q6P4Q7 775 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms