RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 KIAA2012Q0VF49 1180 aa4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 STILQ15468 1287 aa4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 SEPT7Q16181 437 aaKnown RBP4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 ARHGAP44Q17R89 818 aa4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 UBXN11Q5T124 520 aa4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 LCE1DQ5T752 114 aa4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 CC2D1AQ6P1N0 951 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 UBE2R2Q712K3 238 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 RTN4RL1Q86UN2 441 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 NXPE1Q8N323 547 aa4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 KLHL36Q8N4N3 616 aa4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 ERCC4Q92889 916 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 RELTQ969Z4 430 aa4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 ORAI3Q9BRQ5 295 aa4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 KATNBL1Q9H079 304 aa4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 CABP5Q9NP86 173 aa4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 H2AFY2Q9P0M6 372 aaPredicted RBP4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 ADAM29Q9UKF5 820 aa4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 PTPN22Q9Y2R2 807 aa4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 ARHGEF40Q8TER5 1519 aa4.76□□□□□ -1.65
HMGB1P6-201ENST00000569046 GOLGA3Q08378 1498 aa4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 SUPT6HQ7KZ85 1726 aaKnown RBP4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 TTC37Q6PGP7 1564 aa4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 A0A087X0B3 334 aa4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 ZNF888P0CJ79 500 aaPredicted RBP4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 ATP2A2P16615 1042 aaKnown RBP4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 SLC9A1P19634 815 aa4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 CSF2RBP32927 897 aa4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 ECE1P42892 770 aa4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 DSG1Q02413 1049 aa4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 KANK2Q63ZY3 851 aa4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 Q6ZUG5 572 aa4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 GPR155Q7Z3F1 870 aa4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 KBTBD2Q8IY47 623 aa4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 LGI4Q8N135 537 aa4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 KIAA1958Q8N8K9 716 aa4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 HIPK4Q8NE63 616 aa4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 CXorf38Q8TB03 319 aa4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 MFSD3Q96ES6 412 aa4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 BTBD2Q9BX70 525 aa4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 PLAAQ9Y263 795 aa4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 ZDHHC9Q9Y397 364 aa4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 ASB1Q9Y576 335 aa4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 C3P01024 1663 aa4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 NEO1Q92859 1461 aa4.75□□□□□ -1.65
HMGB1P6-201ENST00000569046 AKNAQ7Z591 1439 aa4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 ZFYVE16Q7Z3T8 1539 aa4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 GSG1L2A8MUP6 293 aa4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 H7C1D1 291 aa4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 F2P00734 622 aa4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 ADCY8P40145 1251 aa4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 GYS2P54840 703 aa4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 CD83Q01151 205 aa4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 TOP3AQ13472 1001 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 WDR72Q3MJ13 1102 aa4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 TBC1D10BQ4KMP7 808 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 SDE2Q6IQ49 451 aa4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 ESRP1Q6NXG1 681 aaKnown RBP4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 BORAQ6PGQ7 559 aa4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 FAM124AQ86V42 546 aa4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 AJUBAQ96IF1 538 aa4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 C16orf92Q96LL3 132 aa4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 ELF4Q99607 663 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 PTPN18Q99952 460 aa4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 BDH2Q9BUT1 245 aa4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 OR10A5Q9H207 317 aa4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 BARX1Q9HBU1 254 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 OXSMQ9NWU1 459 aa4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 FANCAO15360 1455 aa4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 DENND4BO75064 1496 aaPredicted RBP4.74□□□□□ -1.65
HMGB1P6-201ENST00000569046 B4GALT4O60513 344 aa4.73□□□□□ -1.65
HMGB1P6-201ENST00000569046 POLD1P28340 1107 aa4.73□□□□□ -1.65
HMGB1P6-201ENST00000569046 FNTBP49356 437 aa4.73□□□□□ -1.65
HMGB1P6-201ENST00000569046 ALDH6A1Q02252 535 aaKnown RBP4.73□□□□□ -1.65
HMGB1P6-201ENST00000569046 DPP8Q6V1X1 898 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P6-201ENST00000569046 KIF18BQ86Y91 864 aa4.73□□□□□ -1.65
HMGB1P6-201ENST00000569046 CHTF18Q8WVB6 975 aa4.73□□□□□ -1.65
HMGB1P6-201ENST00000569046 RBM15Q96T37 977 aaKnown RBP eCLIP4.73□□□□□ -1.65
HMGB1P6-201ENST00000569046 SSBP3Q9BWW4 388 aaPredicted RBP4.73□□□□□ -1.65
HMGB1P6-201ENST00000569046 ACSS2Q9NR19 701 aa4.73□□□□□ -1.65
HMGB1P6-201ENST00000569046 CDC42EP3Q9UKI2 254 aa4.73□□□□□ -1.65
HMGB1P6-201ENST00000569046 TMA7Q9Y2S6 64 aaKnown RBP4.73□□□□□ -1.65
HMGB1P6-201ENST00000569046 MYO5CQ9NQX4 1742 aa4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 TGM5O43548 720 aa4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 PDE8AO60658 829 aa4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 PRLP01236 227 aa4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 MYCLP1P12525 358 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 HSD3B2P26439 372 aa4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 RGS3P49796 1198 aa4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 MOGSQ13724 837 aa4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 ZNF174Q15697 407 aa4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 LARP4Q71RC2 724 aaKnown RBP eCLIP4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 CXXC5Q7LFL8 322 aaKnown RBP4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 FAM9AQ8IZU1 332 aaPredicted RBP4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 SMC1BQ8NDV3 1235 aa4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 ZDHHC5Q9C0B5 715 aa4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 PCIF1Q9H4Z3 704 aa4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 THG1LQ9NWX6 298 aaKnown RBP4.72□□□□□ -1.65
HMGB1P6-201ENST00000569046 PPP4R1LQ9P1A2 415 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms