RNA–Protein interactions for RNA: ENST00000567988.5

FANCA-229, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 915 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-229ENST00000567988 SEPT8Q92599 483 aa13.78□□□□□ -0.2
FANCA-229ENST00000567988 TIFAQ96CG3 184 aa13.78□□□□□ -0.2
FANCA-229ENST00000567988 SH2D3AQ9BRG2 576 aa13.78□□□□□ -0.2
FANCA-229ENST00000567988 TMX1Q9H3N1 280 aa13.78□□□□□ -0.2
FANCA-229ENST00000567988 ZSWIM4Q9H7M6 989 aa13.78□□□□□ -0.2
FANCA-229ENST00000567988 CYP26B1Q9NR63 512 aa13.78□□□□□ -0.2
FANCA-229ENST00000567988 VTNP04004 478 aa13.77□□□□□ -0.21
FANCA-229ENST00000567988 ATP2B1P20020 1258 aa13.77□□□□□ -0.21
FANCA-229ENST00000567988 CD52P31358 61 aa13.77□□□□□ -0.21
FANCA-229ENST00000567988 YWHABP31946 246 aaKnown RBP13.77□□□□□ -0.21
FANCA-229ENST00000567988 PRPHP41219 470 aa13.77□□□□□ -0.21
FANCA-229ENST00000567988 GPC3P51654 580 aa13.77□□□□□ -0.21
FANCA-229ENST00000567988 CRYBB1P53674 252 aaPredicted RBP13.77□□□□□ -0.21
FANCA-229ENST00000567988 NPEPPSP55786 919 aa13.77□□□□□ -0.21
FANCA-229ENST00000567988 ATP2C1P98194 919 aaPredicted RBP13.77□□□□□ -0.21
FANCA-229ENST00000567988 CTTNQ14247 550 aaKnown RBP13.77□□□□□ -0.21
FANCA-229ENST00000567988 RILPL1Q5EBL4 403 aa13.77□□□□□ -0.21
FANCA-229ENST00000567988 LARP1BQ659C4 914 aaKnown RBP13.77□□□□□ -0.21
FANCA-229ENST00000567988 ARID2Q68CP9 1835 aa13.77□□□□□ -0.21
FANCA-229ENST00000567988 EFCAB12Q6NXP0 572 aa13.77□□□□□ -0.21
FANCA-229ENST00000567988 TMCO2Q7Z6W1 182 aaPredicted RBP13.77□□□□□ -0.21
FANCA-229ENST00000567988 ZNF710Q8N1W2 664 aa13.77□□□□□ -0.21
FANCA-229ENST00000567988 TOP1MTQ969P6 601 aa13.77□□□□□ -0.21
FANCA-229ENST00000567988 POLR3CQ9BUI4 534 aaPredicted RBP13.77□□□□□ -0.21
FANCA-229ENST00000567988 ERVK-5Q9HDB9 667 aa13.77□□□□□ -0.21
FANCA-229ENST00000567988 XPNPEP1Q9NQW7 623 aa13.77□□□□□ -0.21
FANCA-229ENST00000567988 SEPT9Q9UHD8 586 aaPredicted RBP13.77□□□□□ -0.21
FANCA-229ENST00000567988 PADI3Q9ULW8 664 aa13.77□□□□□ -0.21
FANCA-229ENST00000567988 NOL7Q9UMY1 257 aaKnown RBP13.77□□□□□ -0.21
FANCA-229ENST00000567988 DKC1O60832 514 aaKnown RBP eCLIP13.76□□□□□ -0.21
FANCA-229ENST00000567988 MED24O75448 989 aa13.76□□□□□ -0.21
FANCA-229ENST00000567988 LINC00271P0C7V0 271 aa13.76□□□□□ -0.21
FANCA-229ENST00000567988 CYP4A11Q02928 519 aa13.76□□□□□ -0.21
FANCA-229ENST00000567988 TBC1D8BQ0IIM8 1120 aa13.76□□□□□ -0.21
FANCA-229ENST00000567988 PTGDRQ13258 359 aa13.76□□□□□ -0.21
FANCA-229ENST00000567988 DSC3Q14574 896 aa13.76□□□□□ -0.21
FANCA-229ENST00000567988 KIZQ2M2Z5 673 aa13.76□□□□□ -0.21
FANCA-229ENST00000567988 MTERF2Q49AM1 385 aa13.76□□□□□ -0.21
FANCA-229ENST00000567988 ZNF697Q5TEC3 545 aa13.76□□□□□ -0.21
FANCA-229ENST00000567988 TRMT1LQ7Z2T5 733 aaKnown RBP13.76□□□□□ -0.21
FANCA-229ENST00000567988 FAM228AQ86W67 206 aa13.76□□□□□ -0.21
FANCA-229ENST00000567988 CATSPER3Q86XQ3 398 aa13.76□□□□□ -0.21
FANCA-229ENST00000567988 TSPYL2Q9H2G4 693 aaPredicted RBP13.76□□□□□ -0.21
FANCA-229ENST00000567988 NKX2-4Q9H2Z4 354 aa13.76□□□□□ -0.21
FANCA-229ENST00000567988 NOC2LQ9Y3T9 749 aaKnown RBP13.76□□□□□ -0.21
FANCA-229ENST00000567988 VCANP13611 3396 aa13.76□□□□□ -0.21
FANCA-229ENST00000567988 EVPLQ92817 2033 aa13.76□□□□□ -0.21
FANCA-229ENST00000567988 TTC3P53804 2025 aa13.75□□□□□ -0.21
FANCA-229ENST00000567988 LCHNA4D1U4 455 aa13.75□□□□□ -0.21
FANCA-229ENST00000567988 DDX11L8A8MPP1 907 aa13.75□□□□□ -0.21
FANCA-229ENST00000567988 LAD1O00515 517 aa13.75□□□□□ -0.21
FANCA-229ENST00000567988 ENPP3O14638 875 aa13.75□□□□□ -0.21
FANCA-229ENST00000567988 MGEA5O60502 916 aa13.75□□□□□ -0.21
FANCA-229ENST00000567988 XRCC6P12956 609 aaKnown RBP eCLIP13.75□□□□□ -0.21
FANCA-229ENST00000567988 SYT1P21579 422 aa13.75□□□□□ -0.21
FANCA-229ENST00000567988 MUTP22033 750 aa13.75□□□□□ -0.21
FANCA-229ENST00000567988 RPA1P27694 616 aa13.75□□□□□ -0.21
FANCA-229ENST00000567988 RARRES1P49788 294 aa13.75□□□□□ -0.21
FANCA-229ENST00000567988 TAP1Q03518 808 aa13.75□□□□□ -0.21
FANCA-229ENST00000567988 RESTQ13127 1097 aa13.75□□□□□ -0.21
FANCA-229ENST00000567988 PDIA5Q14554 519 aa13.75□□□□□ -0.21
FANCA-229ENST00000567988 GRIN2CQ14957 1233 aa13.75□□□□□ -0.21
FANCA-229ENST00000567988 ECM1Q16610 540 aa13.75□□□□□ -0.21
FANCA-229ENST00000567988 OSMRQ99650 979 aa13.75□□□□□ -0.21
FANCA-229ENST00000567988 MMTAG2Q9BU76 263 aaKnown RBP13.75□□□□□ -0.21
FANCA-229ENST00000567988 ZNF576Q9H609 170 aa13.75□□□□□ -0.21
FANCA-229ENST00000567988 TUFT1Q9NNX1 390 aa13.75□□□□□ -0.21
FANCA-229ENST00000567988 ANKEF1Q9NU02 776 aa13.75□□□□□ -0.21
FANCA-229ENST00000567988 MTMR6Q9Y217 621 aa13.75□□□□□ -0.21
FANCA-229ENST00000567988 CA3P07451 260 aa13.74□□□□□ -0.21
FANCA-229ENST00000567988 DARSP14868 501 aaKnown RBP13.74□□□□□ -0.21
FANCA-229ENST00000567988 RFC5P40937 340 aa13.74□□□□□ -0.21
FANCA-229ENST00000567988 TECP42680 631 aa13.74□□□□□ -0.21
FANCA-229ENST00000567988 KCNJ6P48051 423 aa13.74□□□□□ -0.21
FANCA-229ENST00000567988 NLRP11P59045 1033 aaKnown RBP13.74□□□□□ -0.21
FANCA-229ENST00000567988 GNL2Q13823 731 aaKnown RBP13.74□□□□□ -0.21
FANCA-229ENST00000567988 BRAPQ7Z569 592 aa13.74□□□□□ -0.21
FANCA-229ENST00000567988 SPRED2Q7Z698 418 aa13.74□□□□□ -0.21
FANCA-229ENST00000567988 METTL13Q8N6R0 699 aa13.74□□□□□ -0.21
FANCA-229ENST00000567988 ZNF689Q96CS4 500 aaPredicted RBP13.74□□□□□ -0.21
FANCA-229ENST00000567988 CEP170P1Q96L14 293 aa13.74□□□□□ -0.21
FANCA-229ENST00000567988 CDX2Q99626 313 aaPredicted RBP13.74□□□□□ -0.21
FANCA-229ENST00000567988 RAD9AQ99638 391 aa13.74□□□□□ -0.21
FANCA-229ENST00000567988 FTHL17Q9BXU8 183 aa13.74□□□□□ -0.21
FANCA-229ENST00000567988 LOXHD1Q8IVV2 1947 aa13.74□□□□□ -0.21
FANCA-229ENST00000567988 H3BQV1 296 aa13.73□□□□□ -0.21
FANCA-229ENST00000567988 M0QZ92 97 aa13.73□□□□□ -0.21
FANCA-229ENST00000567988 MARCH6O60337 910 aa13.73□□□□□ -0.21
FANCA-229ENST00000567988 AMHP03971 560 aa13.73□□□□□ -0.21
FANCA-229ENST00000567988 PDCP20941 246 aa13.73□□□□□ -0.21
FANCA-229ENST00000567988 EIF4BP23588 611 aaKnown RBP13.73□□□□□ -0.21
FANCA-229ENST00000567988 TMOD1P28289 359 aa13.73□□□□□ -0.21
FANCA-229ENST00000567988 FAM189BP81408 668 aa13.73□□□□□ -0.21
FANCA-229ENST00000567988 TMEM266Q2M3C6 531 aa13.73□□□□□ -0.21
FANCA-229ENST00000567988 HYIQ5T013 277 aa13.73□□□□□ -0.21
FANCA-229ENST00000567988 TPH2Q8IWU9 490 aa13.73□□□□□ -0.21
FANCA-229ENST00000567988 MAP7D2Q96T17 732 aa13.73□□□□□ -0.21
FANCA-229ENST00000567988 IFT122Q9HBG6 1241 aa13.73□□□□□ -0.21
FANCA-229ENST00000567988 MSRAQ9UJ68 235 aa13.73□□□□□ -0.21
FANCA-229ENST00000567988 DBR1Q9UK59 544 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms