RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 CCDC51Q96ER9 411 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 CEP63Q96MT8 703 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 MPHOSPH6Q99547 160 aaKnown RBP16.15■□□□□ 0.18
COMMD4-221ENST00000567935 LXNQ9BS40 222 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 TIPINQ9BVW5 301 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 SPATC1LQ9H0A9 340 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 OLFML3Q9NRN5 406 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 RGL1Q9NZL6 768 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 DBR1Q9UK59 544 aaKnown RBP16.15■□□□□ 0.18
COMMD4-221ENST00000567935 PNMA3Q9UL41 463 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 PYCARDQ9ULZ3 195 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 PCDHA2Q9Y5H9 948 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 UBE4BO95155 1302 aa16.15■□□□□ 0.18
COMMD4-221ENST00000567935 CCP110O43303 1012 aa16.14■□□□□ 0.17
COMMD4-221ENST00000567935 OFD1O75665 1012 aa16.14■□□□□ 0.17
COMMD4-221ENST00000567935 GUCY2CP25092 1073 aa16.14■□□□□ 0.17
COMMD4-221ENST00000567935 CCND3P30281 292 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-221ENST00000567935 QARSP47897 775 aaKnown RBP16.14■□□□□ 0.17
COMMD4-221ENST00000567935 DNM2P50570 870 aa16.14■□□□□ 0.17
COMMD4-221ENST00000567935 ATN1P54259 1190 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-221ENST00000567935 PSMC6P62333 389 aa16.14■□□□□ 0.17
COMMD4-221ENST00000567935 HERVK_113P62684 666 aa16.14■□□□□ 0.17
COMMD4-221ENST00000567935 ITGB3BPQ13352 177 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-221ENST00000567935 RINT1Q6NUQ1 792 aa16.14■□□□□ 0.17
COMMD4-221ENST00000567935 ARMCX5Q6P1M9 558 aa16.14■□□□□ 0.17
COMMD4-221ENST00000567935 PPFIBP1Q86W92 1011 aa16.14■□□□□ 0.17
COMMD4-221ENST00000567935 SMAP1Q8IYB5 467 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-221ENST00000567935 UHRF1Q96T88 793 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-221ENST00000567935 REEP2Q9BRK0 252 aa16.14■□□□□ 0.17
COMMD4-221ENST00000567935 SENP6Q9GZR1 1112 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-221ENST00000567935 ASCC2Q9H1I8 757 aaPredicted RBP16.14■□□□□ 0.17
COMMD4-221ENST00000567935 LOC102724159A0A0B4J2E5 919 aa16.13■□□□□ 0.17
COMMD4-221ENST00000567935 ARHGEF35A5YM69 484 aa16.13■□□□□ 0.17
COMMD4-221ENST00000567935 EIF3DO15371 548 aaKnown RBP eCLIP16.13■□□□□ 0.17
COMMD4-221ENST00000567935 PRKCSHP14314 528 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-221ENST00000567935 FKBP3Q00688 224 aaKnown RBP16.13■□□□□ 0.17
COMMD4-221ENST00000567935 CACNB2Q08289 660 aaPredicted RBP16.13■□□□□ 0.17
COMMD4-221ENST00000567935 PWP2Q15269 919 aaKnown RBP16.13■□□□□ 0.17
COMMD4-221ENST00000567935 BMT2Q1RMZ1 405 aa16.13■□□□□ 0.17
COMMD4-221ENST00000567935 EDRF1Q3B7T1 1238 aa16.13■□□□□ 0.17
COMMD4-221ENST00000567935 ZCWPW2Q504Y3 356 aa16.13■□□□□ 0.17
COMMD4-221ENST00000567935 C1orf186Q6ZWK4 172 aa16.13■□□□□ 0.17
COMMD4-221ENST00000567935 CNGA4Q8IV77 575 aa16.13■□□□□ 0.17
COMMD4-221ENST00000567935 C4orf19Q8IY42 314 aa16.13■□□□□ 0.17
COMMD4-221ENST00000567935 ANKRD35Q8N283 1001 aa16.13■□□□□ 0.17
COMMD4-221ENST00000567935 CNOT6LQ96LI5 555 aaKnown RBP16.13■□□□□ 0.17
COMMD4-221ENST00000567935 ASB2Q96Q27 587 aa16.13■□□□□ 0.17
COMMD4-221ENST00000567935 PANX2Q96RD6 677 aa16.13■□□□□ 0.17
COMMD4-221ENST00000567935 TMX1Q9H3N1 280 aa16.13■□□□□ 0.17
COMMD4-221ENST00000567935 TAB2Q9NYJ8 693 aa16.13■□□□□ 0.17
COMMD4-221ENST00000567935 AKR1B15C9JRZ8 316 aaPredicted RBP16.12■□□□□ 0.17
COMMD4-221ENST00000567935 EIF3JO75822 258 aaKnown RBP16.12■□□□□ 0.17
COMMD4-221ENST00000567935 FAM13AO94988 1023 aa16.12■□□□□ 0.17
COMMD4-221ENST00000567935 ICAM3P32942 547 aa16.12■□□□□ 0.17
COMMD4-221ENST00000567935 MTIF2P46199 727 aaKnown RBP16.12■□□□□ 0.17
COMMD4-221ENST00000567935 ZNF131P52739 623 aa16.12■□□□□ 0.17
COMMD4-221ENST00000567935 PSMC5P62195 406 aa16.12■□□□□ 0.17
COMMD4-221ENST00000567935 STXBP2Q15833 593 aa16.12■□□□□ 0.17
COMMD4-221ENST00000567935 EPM2AIP1Q7L775 607 aaPredicted RBP16.12■□□□□ 0.17
COMMD4-221ENST00000567935 ZC3H3Q8IXZ2 948 aaKnown RBP16.12■□□□□ 0.17
COMMD4-221ENST00000567935 RETREG2Q8NC44 543 aa16.12■□□□□ 0.17
COMMD4-221ENST00000567935 ATXN2LQ8WWM7 1075 aaKnown RBP16.12■□□□□ 0.17
COMMD4-221ENST00000567935 HPS3Q969F9 1004 aa16.12■□□□□ 0.17
COMMD4-221ENST00000567935 TUBGCP2Q9BSJ2 902 aa16.12■□□□□ 0.17
COMMD4-221ENST00000567935 NUP58Q9BVL2 599 aa16.12■□□□□ 0.17
COMMD4-221ENST00000567935 NAA15Q9BXJ9 866 aaKnown RBP16.12■□□□□ 0.17
COMMD4-221ENST00000567935 PARVGQ9HBI0 331 aa16.12■□□□□ 0.17
COMMD4-221ENST00000567935 ANKEF1Q9NU02 776 aa16.12■□□□□ 0.17
COMMD4-221ENST00000567935 BTBD7Q9P203 1132 aa16.12■□□□□ 0.17
COMMD4-221ENST00000567935 PRKAG2Q9UGJ0 569 aa16.12■□□□□ 0.17
COMMD4-221ENST00000567935 SPATA31C2B4DYI2 1134 aa16.11■□□□□ 0.17
COMMD4-221ENST00000567935 ARHGAP6O43182 974 aa16.11■□□□□ 0.17
COMMD4-221ENST00000567935 TEX33O43247 280 aa16.11■□□□□ 0.17
COMMD4-221ENST00000567935 STX10O60499 249 aa16.11■□□□□ 0.17
COMMD4-221ENST00000567935 MAPTP10636 758 aaKnown RBP16.11■□□□□ 0.17
COMMD4-221ENST00000567935 RTP1P59025 263 aa16.11■□□□□ 0.17
COMMD4-221ENST00000567935 ALCAMQ13740 583 aa16.11■□□□□ 0.17
COMMD4-221ENST00000567935 ARID5BQ14865 1188 aa16.11■□□□□ 0.17
COMMD4-221ENST00000567935 FKBP15Q5T1M5 1219 aa16.11■□□□□ 0.17
COMMD4-221ENST00000567935 SFR1Q86XK3 245 aa16.11■□□□□ 0.17
COMMD4-221ENST00000567935 SHCBP1Q8NEM2 672 aa16.11■□□□□ 0.17
COMMD4-221ENST00000567935 SCFD1Q8WVM8 642 aa16.11■□□□□ 0.17
COMMD4-221ENST00000567935 PPM1EQ8WY54 764 aa16.11■□□□□ 0.17
COMMD4-221ENST00000567935 RUSC1Q9BVN2 902 aa16.11■□□□□ 0.17
COMMD4-221ENST00000567935 MOV10L1Q9BXT6 1211 aaKnown RBP16.11■□□□□ 0.17
COMMD4-221ENST00000567935 VPS16Q9H269 839 aa16.11■□□□□ 0.17
COMMD4-221ENST00000567935 ZHX3Q9H4I2 956 aa16.11■□□□□ 0.17
COMMD4-221ENST00000567935 MROH8Q9H579 483 aa16.11■□□□□ 0.17
COMMD4-221ENST00000567935 SAMM50Q9Y512 469 aa16.11■□□□□ 0.17
COMMD4-221ENST00000567935 FRMPD3Q5JV73 1810 aa16.1■□□□□ 0.17
COMMD4-221ENST00000567935 KIAA1217Q5T5P2 1943 aa16.1■□□□□ 0.17
COMMD4-221ENST00000567935 NPHP3-ACAD11A0A0J9YXS1 232 aa16.1■□□□□ 0.17
COMMD4-221ENST00000567935 DDX39AO00148 427 aaKnown RBP16.1■□□□□ 0.17
COMMD4-221ENST00000567935 PDXKO00764 312 aa16.1■□□□□ 0.17
COMMD4-221ENST00000567935 CALUO43852 315 aaPredicted RBP16.1■□□□□ 0.17
COMMD4-221ENST00000567935 TUBB4AP04350 444 aa16.1■□□□□ 0.17
COMMD4-221ENST00000567935 KCNA2P16389 499 aa16.1■□□□□ 0.17
COMMD4-221ENST00000567935 EDNRBP24530 442 aa16.1■□□□□ 0.17
COMMD4-221ENST00000567935 MARSP56192 900 aaKnown RBP16.1■□□□□ 0.17
COMMD4-221ENST00000567935 UBXN1Q04323 297 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms