RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 PLCB4Q15147 1175 aa11.75□□□□□ -0.53
LINC00564-201ENST00000567258 PTPROQ16827 1216 aa11.75□□□□□ -0.53
LINC00564-201ENST00000567258 ODR4Q5SWX8 454 aa11.75□□□□□ -0.53
LINC00564-201ENST00000567258 PDXDC2PQ6P474 469 aa11.75□□□□□ -0.53
LINC00564-201ENST00000567258 TSHZ1Q6ZSZ6 1077 aa11.75□□□□□ -0.53
LINC00564-201ENST00000567258 NME8Q8N427 588 aa11.75□□□□□ -0.53
LINC00564-201ENST00000567258 GDPD5Q8WTR4 605 aa11.75□□□□□ -0.53
LINC00564-201ENST00000567258 TOP1MTQ969P6 601 aa11.75□□□□□ -0.53
LINC00564-201ENST00000567258 AGXT2Q9BYV1 514 aa11.75□□□□□ -0.53
LINC00564-201ENST00000567258 C22orf23Q9BZE7 217 aa11.75□□□□□ -0.53
LINC00564-201ENST00000567258 ZNF302Q9NR11 478 aa11.75□□□□□ -0.53
LINC00564-201ENST00000567258 SH3GLB2Q9NR46 395 aa11.75□□□□□ -0.53
LINC00564-201ENST00000567258 PPP4R2Q9NY27 417 aa11.75□□□□□ -0.53
LINC00564-201ENST00000567258 PCDHA2Q9Y5H9 948 aa11.75□□□□□ -0.53
LINC00564-201ENST00000567258 CDY2AQ9Y6F7 541 aa11.75□□□□□ -0.53
LINC00564-201ENST00000567258 TTC3P53804 2025 aa11.75□□□□□ -0.53
LINC00564-201ENST00000567258 EPOPA6NHQ4 379 aa11.74□□□□□ -0.53
LINC00564-201ENST00000567258 CDKL5O76039 1030 aa11.74□□□□□ -0.53
LINC00564-201ENST00000567258 ARHGEF15O94989 841 aa11.74□□□□□ -0.53
LINC00564-201ENST00000567258 ATG7O95352 703 aa11.74□□□□□ -0.53
LINC00564-201ENST00000567258 PSAPP07602 524 aa11.74□□□□□ -0.53
LINC00564-201ENST00000567258 HTRA4P83105 476 aaPredicted RBP11.74□□□□□ -0.53
LINC00564-201ENST00000567258 KRT76Q01546 638 aa11.74□□□□□ -0.53
LINC00564-201ENST00000567258 ITGB3BPQ13352 177 aaPredicted RBP11.74□□□□□ -0.53
LINC00564-201ENST00000567258 PKN1Q16512 942 aa11.74□□□□□ -0.53
LINC00564-201ENST00000567258 PRR16Q569H4 304 aa11.74□□□□□ -0.53
LINC00564-201ENST00000567258 SWSAP1Q6NVH7 229 aa11.74□□□□□ -0.53
LINC00564-201ENST00000567258 SMAP1Q8IYB5 467 aaPredicted RBP11.74□□□□□ -0.53
LINC00564-201ENST00000567258 HLA-CQ95604 372 aa11.74□□□□□ -0.53
LINC00564-201ENST00000567258 IL17RAQ96F46 866 aa11.74□□□□□ -0.53
LINC00564-201ENST00000567258 ZNF274Q96GC6 653 aaPredicted RBP11.74□□□□□ -0.53
LINC00564-201ENST00000567258 PCYT2Q99447 389 aa11.74□□□□□ -0.53
LINC00564-201ENST00000567258 FTHL17Q9BXU8 183 aa11.74□□□□□ -0.53
LINC00564-201ENST00000567258 TM6SF1Q9BZW5 370 aa11.74□□□□□ -0.53
LINC00564-201ENST00000567258 NCOA5Q9HCD5 579 aaKnown RBP11.74□□□□□ -0.53
LINC00564-201ENST00000567258 PDRG1Q9NUG6 133 aa11.74□□□□□ -0.53
LINC00564-201ENST00000567258 RWDD3Q9Y3V2 267 aa11.74□□□□□ -0.53
LINC00564-201ENST00000567258 TRPV2Q9Y5S1 764 aa11.74□□□□□ -0.53
LINC00564-201ENST00000567258 SQORQ9Y6N5 450 aa11.74□□□□□ -0.53
LINC00564-201ENST00000567258 SMIM35A0A1B0GVV1 85 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 FAM86B1E9PN63 330 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 PPFIA3O75145 1194 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 DEXIO95424 95 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 COL1A2P08123 1366 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 FAM86B2P0C5J1 330 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 XBP1P17861 261 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 KLRC1P26715 233 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 EVCP57679 992 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 PAK2Q13177 524 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 STK3Q13188 491 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 LPIN1Q14693 890 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 ZNF484Q5JVG2 852 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 FBXO47Q5MNV8 452 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 MARCH8Q5T0T0 291 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 ERICH6BQ5W0A0 696 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 KRT40Q6A162 431 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 ZNF746Q6NUN9 644 aaPredicted RBP11.73□□□□□ -0.53
LINC00564-201ENST00000567258 MTHFD1LQ6UB35 978 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 TREML4Q6UXN2 200 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 ABHD15Q6UXT9 468 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 TRMT1LQ7Z2T5 733 aaKnown RBP11.73□□□□□ -0.53
LINC00564-201ENST00000567258 FIBCD1Q8N539 461 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 ADAMTS19Q8TE59 1207 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 ATP8B4Q8TF62 1192 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 TRAPPC12Q8WVT3 735 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 UIMC1Q96RL1 719 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 CELF4Q9BZC1 486 aaKnown RBP11.73□□□□□ -0.53
LINC00564-201ENST00000567258 SUGCTQ9HAC7 445 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 VPS54Q9P1Q0 977 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 LRFN2Q9ULH4 789 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 CEP131Q9UPN4 1083 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 PCDHA10Q9Y5I2 948 aa11.73□□□□□ -0.53
LINC00564-201ENST00000567258 IGLV3-22A0A075B6J6 115 aa11.72□□□□□ -0.53
LINC00564-201ENST00000567258 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.72□□□□□ -0.53
LINC00564-201ENST00000567258 STAG3L1P0CL83 205 aa11.72□□□□□ -0.53
LINC00564-201ENST00000567258 USP11P51784 963 aa11.72□□□□□ -0.53
LINC00564-201ENST00000567258 MGAT3Q09327 533 aa11.72□□□□□ -0.53
LINC00564-201ENST00000567258 TMEM62Q0P6H9 643 aa11.72□□□□□ -0.53
LINC00564-201ENST00000567258 TOB2Q14106 344 aaPredicted RBP11.72□□□□□ -0.53
LINC00564-201ENST00000567258 NTRK3Q16288 839 aa11.72□□□□□ -0.53
LINC00564-201ENST00000567258 EPC2Q52LR7 807 aa11.72□□□□□ -0.53
LINC00564-201ENST00000567258 FAM43BQ6ZT52 329 aaPredicted RBP11.72□□□□□ -0.53
LINC00564-201ENST00000567258 TMEM192Q8IY95 271 aa11.72□□□□□ -0.53
LINC00564-201ENST00000567258 FAM177A1Q8N128 213 aaPredicted RBP11.72□□□□□ -0.53
LINC00564-201ENST00000567258 RASGRP4Q8TDF6 673 aa11.72□□□□□ -0.53
LINC00564-201ENST00000567258 FAM167AQ96KS9 214 aa11.72□□□□□ -0.53
LINC00564-201ENST00000567258 UHRF1Q96T88 793 aaPredicted RBP11.72□□□□□ -0.53
LINC00564-201ENST00000567258 C17orf80Q9BSJ5 609 aa11.72□□□□□ -0.53
LINC00564-201ENST00000567258 UPF3BQ9BZI7 483 aaKnown RBP11.72□□□□□ -0.53
LINC00564-201ENST00000567258 SLKQ9H2G2 1235 aaPredicted RBP11.72□□□□□ -0.53
LINC00564-201ENST00000567258 GINS2Q9Y248 185 aa11.72□□□□□ -0.53
LINC00564-201ENST00000567258 NCOR1O75376 2440 aa11.71□□□□□ -0.53
LINC00564-201ENST00000567258 VCANP13611 3396 aa11.71□□□□□ -0.53
LINC00564-201ENST00000567258 IGKV6D-21A0A0A0MT36 114 aa11.71□□□□□ -0.53
LINC00564-201ENST00000567258 WDR64B1ANS9 1081 aa11.71□□□□□ -0.53
LINC00564-201ENST00000567258 ENPP3O14638 875 aa11.71□□□□□ -0.53
LINC00564-201ENST00000567258 GAS7O60861 476 aa11.71□□□□□ -0.53
LINC00564-201ENST00000567258 CCNE2O96020 404 aa11.71□□□□□ -0.53
LINC00564-201ENST00000567258 TMOD1P28289 359 aa11.71□□□□□ -0.53
LINC00564-201ENST00000567258 CD52P31358 61 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms