RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 MRPL11Q9Y3B7 192 aaKnown RBP11.24□□□□□ -0.61
CAPN3-216ENST00000567071 TRPV2Q9Y5S1 764 aa11.24□□□□□ -0.61
CAPN3-216ENST00000567071 IGSF10Q6WRI0 2623 aa11.23□□□□□ -0.61
CAPN3-216ENST00000567071 C2orf16Q68DN1 1984 aa11.23□□□□□ -0.61
CAPN3-216ENST00000567071 CHGBP05060 677 aa11.23□□□□□ -0.61
CAPN3-216ENST00000567071 TOP1P11387 765 aaKnown RBP11.23□□□□□ -0.61
CAPN3-216ENST00000567071 LIMK1P53667 647 aa11.23□□□□□ -0.61
CAPN3-216ENST00000567071 NFX1Q12986 1120 aaKnown RBP11.23□□□□□ -0.61
CAPN3-216ENST00000567071 NEDD9Q14511 834 aa11.23□□□□□ -0.61
CAPN3-216ENST00000567071 ELMSAN1Q6PJG2 1045 aa11.23□□□□□ -0.61
CAPN3-216ENST00000567071 C15orf39Q6ZRI6 1047 aa11.23□□□□□ -0.61
CAPN3-216ENST00000567071 SLC24A5Q71RS6 500 aa11.23□□□□□ -0.61
CAPN3-216ENST00000567071 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-216ENST00000567071 SIRT2Q8IXJ6 389 aa11.23□□□□□ -0.61
CAPN3-216ENST00000567071 ABI1Q8IZP0 508 aa11.23□□□□□ -0.61
CAPN3-216ENST00000567071 LRRC43Q8N309 656 aa11.23□□□□□ -0.61
CAPN3-216ENST00000567071 TBC1D5Q92609 795 aa11.23□□□□□ -0.61
CAPN3-216ENST00000567071 NELL1Q92832 810 aa11.23□□□□□ -0.61
CAPN3-216ENST00000567071 FAM49AQ9H0Q0 323 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-216ENST00000567071 EPB41L4AQ9HCS5 686 aaPredicted RBP11.23□□□□□ -0.61
CAPN3-216ENST00000567071 SLC2A4RGQ9NR83 387 aa11.23□□□□□ -0.61
CAPN3-216ENST00000567071 EPS15L1Q9UBC2 864 aa11.23□□□□□ -0.61
CAPN3-216ENST00000567071 MYH6P13533 1939 aa11.23□□□□□ -0.61
CAPN3-216ENST00000567071 RANBP6O60518 1105 aaKnown RBP11.22□□□□□ -0.61
CAPN3-216ENST00000567071 NMT2O60551 498 aa11.22□□□□□ -0.61
CAPN3-216ENST00000567071 CFBP00751 764 aa11.22□□□□□ -0.61
CAPN3-216ENST00000567071 IGHDP01880 384 aa11.22□□□□□ -0.61
CAPN3-216ENST00000567071 CCND2P30279 289 aa11.22□□□□□ -0.61
CAPN3-216ENST00000567071 SP2Q02086 613 aa11.22□□□□□ -0.61
CAPN3-216ENST00000567071 PRKCQQ04759 706 aa11.22□□□□□ -0.61
CAPN3-216ENST00000567071 GRIK4Q16099 956 aa11.22□□□□□ -0.61
CAPN3-216ENST00000567071 GNPTABQ3T906 1256 aa11.22□□□□□ -0.61
CAPN3-216ENST00000567071 METTL7BQ6UX53 244 aa11.22□□□□□ -0.61
CAPN3-216ENST00000567071 C12orf50Q8NA57 414 aaPredicted RBP11.22□□□□□ -0.61
CAPN3-216ENST00000567071 RHPN1Q8TCX5 695 aa11.22□□□□□ -0.61
CAPN3-216ENST00000567071 TMEM169Q96HH4 297 aa11.22□□□□□ -0.61
CAPN3-216ENST00000567071 ADAM33Q9BZ11 813 aa11.22□□□□□ -0.61
CAPN3-216ENST00000567071 TMEM117Q9H0C3 514 aa11.22□□□□□ -0.61
CAPN3-216ENST00000567071 NAPBQ9H115 298 aa11.22□□□□□ -0.61
CAPN3-216ENST00000567071 IL17RBQ9NRM6 502 aa11.22□□□□□ -0.61
CAPN3-216ENST00000567071 IGSF9BQ9UPX0 1349 aa11.22□□□□□ -0.61
CAPN3-216ENST00000567071 FAM170BA6NMN3 283 aa11.21□□□□□ -0.61
CAPN3-216ENST00000567071 GPAA1O43292 621 aa11.21□□□□□ -0.61
CAPN3-216ENST00000567071 KCNK5O95279 499 aa11.21□□□□□ -0.61
CAPN3-216ENST00000567071 ATP5JP18859 108 aa11.21□□□□□ -0.61
CAPN3-216ENST00000567071 PPARAQ07869 468 aa11.21□□□□□ -0.61
CAPN3-216ENST00000567071 ZNF543Q08ER8 600 aa11.21□□□□□ -0.61
CAPN3-216ENST00000567071 ZBTB41Q5SVQ8 909 aa11.21□□□□□ -0.61
CAPN3-216ENST00000567071 TSSK4Q6SA08 328 aa11.21□□□□□ -0.61
CAPN3-216ENST00000567071 CYFIP1Q7L576 1253 aa11.21□□□□□ -0.61
CAPN3-216ENST00000567071 IFNL3Q8IZI9 196 aa11.21□□□□□ -0.61
CAPN3-216ENST00000567071 APPBP2Q92624 585 aa11.21□□□□□ -0.61
CAPN3-216ENST00000567071 KLHL5Q96PQ7 755 aa11.21□□□□□ -0.61
CAPN3-216ENST00000567071 ADAM2Q99965 735 aa11.21□□□□□ -0.61
CAPN3-216ENST00000567071 PDCD2LQ9BRP1 358 aa11.21□□□□□ -0.61
CAPN3-216ENST00000567071 RWDD1Q9H446 243 aaPredicted RBP11.21□□□□□ -0.61
CAPN3-216ENST00000567071 TMEM161AQ9NX61 479 aa11.21□□□□□ -0.61
CAPN3-216ENST00000567071 CLUHO75153 1309 aa11.2□□□□□ -0.62
CAPN3-216ENST00000567071 CARNS1A5YM72 827 aa11.2□□□□□ -0.62
CAPN3-216ENST00000567071 PATL2C9JE40 543 aaKnown RBP11.2□□□□□ -0.62
CAPN3-216ENST00000567071 HMMRO75330 724 aa11.2□□□□□ -0.62
CAPN3-216ENST00000567071 PDHBP11177 359 aa11.2□□□□□ -0.62
CAPN3-216ENST00000567071 FGFR1P11362 822 aa11.2□□□□□ -0.62
CAPN3-216ENST00000567071 PBX3P40426 434 aa11.2□□□□□ -0.62
CAPN3-216ENST00000567071 ALDH7A1P49419 539 aaKnown RBP11.2□□□□□ -0.62
CAPN3-216ENST00000567071 FOXC1Q12948 553 aa11.2□□□□□ -0.62
CAPN3-216ENST00000567071 HDAC1Q13547 482 aaPredicted RBP11.2□□□□□ -0.62
CAPN3-216ENST00000567071 MLF2Q15773 248 aaPredicted RBP11.2□□□□□ -0.62
CAPN3-216ENST00000567071 CDC37Q16543 378 aaPredicted RBP11.2□□□□□ -0.62
CAPN3-216ENST00000567071 GPATCH4Q5T3I0 446 aaKnown RBP11.2□□□□□ -0.62
CAPN3-216ENST00000567071 RSPO2Q6UXX9 243 aaPredicted RBP11.2□□□□□ -0.62
CAPN3-216ENST00000567071 CYP26C1Q6V0L0 522 aa11.2□□□□□ -0.62
CAPN3-216ENST00000567071 VSIG10LQ86VR7 867 aa11.2□□□□□ -0.62
CAPN3-216ENST00000567071 VPS52Q8N1B4 723 aa11.2□□□□□ -0.62
CAPN3-216ENST00000567071 SLC22A17Q8WUG5 538 aa11.2□□□□□ -0.62
CAPN3-216ENST00000567071 KIF1BPQ96EK5 621 aa11.2□□□□□ -0.62
CAPN3-216ENST00000567071 TMX1Q9H3N1 280 aa11.2□□□□□ -0.62
CAPN3-216ENST00000567071 PRMT8Q9NR22 394 aaPredicted RBP11.2□□□□□ -0.62
CAPN3-216ENST00000567071 RGS18Q9NS28 235 aa11.2□□□□□ -0.62
CAPN3-216ENST00000567071 DPP7Q9UHL4 492 aa11.2□□□□□ -0.62
CAPN3-216ENST00000567071 PCDHA1Q9Y5I3 950 aa11.2□□□□□ -0.62
CAPN3-216ENST00000567071 DOCK8Q8NF50 2099 aa11.2□□□□□ -0.62
CAPN3-216ENST00000567071 DMXL2Q8TDJ6 3036 aa11.19□□□□□ -0.62
CAPN3-216ENST00000567071 MBLAC1A4D2B0 266 aaPredicted RBP11.19□□□□□ -0.62
CAPN3-216ENST00000567071 RRN3P2A6NIE6 340 aa11.19□□□□□ -0.62
CAPN3-216ENST00000567071 N4BP1O75113 896 aaKnown RBP11.19□□□□□ -0.62
CAPN3-216ENST00000567071 RPS6KA5O75582 802 aa11.19□□□□□ -0.62
CAPN3-216ENST00000567071 IGBP1P78318 339 aa11.19□□□□□ -0.62
CAPN3-216ENST00000567071 SP4Q02446 784 aa11.19□□□□□ -0.62
CAPN3-216ENST00000567071 TMEM62Q0P6H9 643 aa11.19□□□□□ -0.62
CAPN3-216ENST00000567071 SNW1Q13573 536 aaKnown RBP11.19□□□□□ -0.62
CAPN3-216ENST00000567071 SIM2Q14190 667 aaPredicted RBP11.19□□□□□ -0.62
CAPN3-216ENST00000567071 PGM5Q15124 567 aa11.19□□□□□ -0.62
CAPN3-216ENST00000567071 TMEM266Q2M3C6 531 aa11.19□□□□□ -0.62
CAPN3-216ENST00000567071 SOWAHCQ53LP3 525 aaPredicted RBP11.19□□□□□ -0.62
CAPN3-216ENST00000567071 PSAPL1Q6NUJ1 521 aa11.19□□□□□ -0.62
CAPN3-216ENST00000567071 CENPQQ7L2Z9 268 aaPredicted RBP11.19□□□□□ -0.62
CAPN3-216ENST00000567071 SLC39A11Q8N1S5 342 aa11.19□□□□□ -0.62
CAPN3-216ENST00000567071 TNPO1Q92973 898 aaKnown RBP11.19□□□□□ -0.62
CAPN3-216ENST00000567071 NELL2Q99435 816 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms