RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 SPICE1Q8N0Z3 855 aa18.32■□□□□ 0.52
CMTM3-213ENST00000566756 USP38Q8NB14 1042 aa18.32■□□□□ 0.52
CMTM3-213ENST00000566756 LENG9Q96B70 501 aa18.32■□□□□ 0.52
CMTM3-213ENST00000566756 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.32■□□□□ 0.52
CMTM3-213ENST00000566756 SMARCAL1Q9NZC9 954 aa18.32■□□□□ 0.52
CMTM3-213ENST00000566756 EHD2Q9NZN4 543 aa18.32■□□□□ 0.52
CMTM3-213ENST00000566756 ZNF112Q9UJU3 913 aa18.32■□□□□ 0.52
CMTM3-213ENST00000566756 NENFQ9UMX5 172 aa18.32■□□□□ 0.52
CMTM3-213ENST00000566756 POLR2AP24928 1970 aaKnown RBP18.32■□□□□ 0.52
CMTM3-213ENST00000566756 A0A0A6YYK5 440 aaPredicted RBP18.31■□□□□ 0.52
CMTM3-213ENST00000566756 HEXIM1O94992 359 aaKnown RBP18.31■□□□□ 0.52
CMTM3-213ENST00000566756 CYP3A4P08684 503 aa18.31■□□□□ 0.52
CMTM3-213ENST00000566756 IRAK1P51617 712 aa18.31■□□□□ 0.52
CMTM3-213ENST00000566756 EXOC3L4Q17RC7 722 aa18.31■□□□□ 0.52
CMTM3-213ENST00000566756 DNAJC21Q5F1R6 531 aaKnown RBP18.31■□□□□ 0.52
CMTM3-213ENST00000566756 ANGEL2Q5VTE6 544 aaKnown RBP18.31■□□□□ 0.52
CMTM3-213ENST00000566756 TSEN2Q8NCE0 465 aaKnown RBP18.31■□□□□ 0.52
CMTM3-213ENST00000566756 TAF4BQ92750 862 aa18.31■□□□□ 0.52
CMTM3-213ENST00000566756 MS4A14Q96JA4 679 aa18.31■□□□□ 0.52
CMTM3-213ENST00000566756 CALR3Q96L12 384 aaKnown RBP18.31■□□□□ 0.52
CMTM3-213ENST00000566756 CAPS2Q9BXY5 557 aa18.31■□□□□ 0.52
CMTM3-213ENST00000566756 OLFML3Q9NRN5 406 aa18.31■□□□□ 0.52
CMTM3-213ENST00000566756 SCAF8Q9UPN6 1271 aaKnown RBP18.31■□□□□ 0.52
CMTM3-213ENST00000566756 GLI1P08151 1106 aa18.31■□□□□ 0.52
CMTM3-213ENST00000566756 GAP43P17677 238 aa18.31■□□□□ 0.52
CMTM3-213ENST00000566756 PON1P27169 355 aa18.31■□□□□ 0.52
CMTM3-213ENST00000566756 STAT3P40763 770 aa18.31■□□□□ 0.52
CMTM3-213ENST00000566756 CORO7P57737 925 aa18.31■□□□□ 0.52
CMTM3-213ENST00000566756 PTK2Q05397 1052 aa18.31■□□□□ 0.52
CMTM3-213ENST00000566756 NBPF12Q5TAG4 269 aaPredicted RBP18.31■□□□□ 0.52
CMTM3-213ENST00000566756 FOXR1Q6PIV2 292 aa18.31■□□□□ 0.52
CMTM3-213ENST00000566756 TRPM4Q8TD43 1214 aa18.31■□□□□ 0.52
CMTM3-213ENST00000566756 ACTRT1Q8TDG2 376 aa18.31■□□□□ 0.52
CMTM3-213ENST00000566756 SPAG5Q96R06 1193 aa18.31■□□□□ 0.52
CMTM3-213ENST00000566756 REEP2Q9BRK0 252 aa18.31■□□□□ 0.52
CMTM3-213ENST00000566756 ZNF341Q9BYN7 854 aa18.31■□□□□ 0.52
CMTM3-213ENST00000566756 KIAA1683Q9H0B3 1180 aa18.31■□□□□ 0.52
CMTM3-213ENST00000566756 TMEM51Q9NW97 253 aa18.31■□□□□ 0.52
CMTM3-213ENST00000566756 FEM1BQ9UK73 627 aa18.31■□□□□ 0.52
CMTM3-213ENST00000566756 SPDYE3A6NKU9 549 aa18.3■□□□□ 0.52
CMTM3-213ENST00000566756 FLOT1O75955 427 aa18.3■□□□□ 0.52
CMTM3-213ENST00000566756 FTCDO95954 541 aa18.3■□□□□ 0.52
CMTM3-213ENST00000566756 HOXD13P35453 343 aa18.3■□□□□ 0.52
CMTM3-213ENST00000566756 MAGEA9P43362 315 aa18.3■□□□□ 0.52
CMTM3-213ENST00000566756 CASP5P51878 434 aa18.3■□□□□ 0.52
CMTM3-213ENST00000566756 CACNB1Q02641 598 aaPredicted RBP18.3■□□□□ 0.52
CMTM3-213ENST00000566756 EPHA7Q15375 998 aa18.3■□□□□ 0.52
CMTM3-213ENST00000566756 RPS6KA1Q15418 735 aa18.3■□□□□ 0.52
CMTM3-213ENST00000566756 PRR16Q569H4 304 aa18.3■□□□□ 0.52
CMTM3-213ENST00000566756 SFR1Q86XK3 245 aa18.3■□□□□ 0.52
CMTM3-213ENST00000566756 LPAR1Q92633 364 aa18.3■□□□□ 0.52
CMTM3-213ENST00000566756 RSPH14Q9UHP6 348 aa18.3■□□□□ 0.52
CMTM3-213ENST00000566756 DAAM1Q9Y4D1 1078 aa18.3■□□□□ 0.52
CMTM3-213ENST00000566756 SMCHD1A6NHR9 2005 aa18.3■□□□□ 0.52
CMTM3-213ENST00000566756 EIF3DO15371 548 aaKnown RBP eCLIP18.3■□□□□ 0.52
CMTM3-213ENST00000566756 EIF3HO15372 352 aaKnown RBP eCLIP18.3■□□□□ 0.52
CMTM3-213ENST00000566756 EYA4O95677 639 aa18.3■□□□□ 0.52
CMTM3-213ENST00000566756 NPEPPSP55786 919 aa18.3■□□□□ 0.52
CMTM3-213ENST00000566756 JAM2P57087 298 aa18.3■□□□□ 0.52
CMTM3-213ENST00000566756 ZNF571Q7Z3V5 609 aaPredicted RBP18.3■□□□□ 0.52
CMTM3-213ENST00000566756 VPS36Q86VN1 386 aa18.3■□□□□ 0.52
CMTM3-213ENST00000566756 LMBR1Q8WVP7 490 aa18.3■□□□□ 0.52
CMTM3-213ENST00000566756 TRERF1Q96PN7 1200 aa18.3■□□□□ 0.52
CMTM3-213ENST00000566756 GLIS2Q9BZE0 524 aaPredicted RBP18.3■□□□□ 0.52
CMTM3-213ENST00000566756 RANBP17Q9H2T7 1088 aaKnown RBP18.3■□□□□ 0.52
CMTM3-213ENST00000566756 EPB41L5Q9HCM4 733 aa18.3■□□□□ 0.52
CMTM3-213ENST00000566756 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.3■□□□□ 0.52
CMTM3-213ENST00000566756 NAGPAQ9UK23 515 aa18.3■□□□□ 0.52
CMTM3-213ENST00000566756 PIK3CDO00329 1044 aa18.29■□□□□ 0.52
CMTM3-213ENST00000566756 KIF4AO95239 1232 aa18.29■□□□□ 0.52
CMTM3-213ENST00000566756 CARSP49589 748 aaKnown RBP18.29■□□□□ 0.52
CMTM3-213ENST00000566756 CFAP58Q5T655 872 aa18.29■□□□□ 0.52
CMTM3-213ENST00000566756 FMNL3Q8IVF7 1028 aa18.29■□□□□ 0.52
CMTM3-213ENST00000566756 LRRC57Q8N9N7 239 aa18.29■□□□□ 0.52
CMTM3-213ENST00000566756 SCFD2Q8WU76 684 aa18.29■□□□□ 0.52
CMTM3-213ENST00000566756 ZBTB9Q96C00 473 aa18.29■□□□□ 0.52
CMTM3-213ENST00000566756 ZIM3Q96PE6 472 aa18.29■□□□□ 0.52
CMTM3-213ENST00000566756 PACSIN1Q9BY11 444 aa18.29■□□□□ 0.52
CMTM3-213ENST00000566756 ZHX3Q9H4I2 956 aa18.29■□□□□ 0.52
CMTM3-213ENST00000566756 VAV3Q9UKW4 847 aa18.29■□□□□ 0.52
CMTM3-213ENST00000566756 BHMG1C9JSJ3 638 aaPredicted RBP18.28■□□□□ 0.52
CMTM3-213ENST00000566756 WDR46O15213 610 aaKnown RBP18.28■□□□□ 0.52
CMTM3-213ENST00000566756 NR3C1P04150 777 aa18.28■□□□□ 0.52
CMTM3-213ENST00000566756 SLC9A1P19634 815 aa18.28■□□□□ 0.52
CMTM3-213ENST00000566756 MUTP22033 750 aa18.28■□□□□ 0.52
CMTM3-213ENST00000566756 HIRAP54198 1017 aaPredicted RBP18.28■□□□□ 0.52
CMTM3-213ENST00000566756 PSMC6P62333 389 aa18.28■□□□□ 0.52
CMTM3-213ENST00000566756 GUCY2DQ02846 1103 aa18.28■□□□□ 0.52
CMTM3-213ENST00000566756 PABPC4Q13310 644 aaKnown RBP eCLIP18.28■□□□□ 0.521e-6■□□□□ 9.5
CMTM3-213ENST00000566756 CUL1Q13616 776 aa18.28■□□□□ 0.52
CMTM3-213ENST00000566756 SLFN11Q7Z7L1 901 aa18.28■□□□□ 0.52
CMTM3-213ENST00000566756 P2RX7Q99572 595 aaKnown RBP18.28■□□□□ 0.52
CMTM3-213ENST00000566756 UBE4BO95155 1302 aa18.28■□□□□ 0.52
CMTM3-213ENST00000566756 ZEB2O60315 1214 aa18.28■□□□□ 0.52
CMTM3-213ENST00000566756 FERP16591 822 aa18.28■□□□□ 0.52
CMTM3-213ENST00000566756 ARID5AQ03989 594 aa18.28■□□□□ 0.52
CMTM3-213ENST00000566756 TTMPQ5BVD1 217 aa18.28■□□□□ 0.52
CMTM3-213ENST00000566756 ALKBH5Q6P6C2 394 aaKnown RBP18.28■□□□□ 0.52
CMTM3-213ENST00000566756 GPIHBP1Q8IV16 184 aa18.28■□□□□ 0.52
CMTM3-213ENST00000566756 C10orf67Q8IYJ2 551 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms