RNA–Protein interactions for RNA: ENST00000566501.5

EIF3C-209, Transcript of eukaryotic translation initiation factor 3 subunit C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3C, Length 3,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3C-209ENST00000566501 TDRKHQ9Y2W6 561 aaKnown RBP12.86□□□□□ -0.35
EIF3C-209ENST00000566501 UTP11Q9Y3A2 253 aaKnown RBP12.86□□□□□ -0.35
EIF3C-209ENST00000566501 COL18A1P39060 1754 aa12.86□□□□□ -0.35
EIF3C-209ENST00000566501 CCDC169A6NNP5 214 aa12.86□□□□□ -0.35
EIF3C-209ENST00000566501 FGFR4P22455 802 aa12.86□□□□□ -0.35
EIF3C-209ENST00000566501 GALK1P51570 392 aa12.86□□□□□ -0.35
EIF3C-209ENST00000566501 PMS2P54278 862 aa12.86□□□□□ -0.35
EIF3C-209ENST00000566501 PLTPP55058 493 aa12.86□□□□□ -0.35
EIF3C-209ENST00000566501 PTGDRQ13258 359 aa12.86□□□□□ -0.35
EIF3C-209ENST00000566501 SCARF1Q14162 830 aa12.86□□□□□ -0.35
EIF3C-209ENST00000566501 DAAM2Q86T65 1068 aa12.86□□□□□ -0.35
EIF3C-209ENST00000566501 SPATA24Q86W54 205 aa12.86□□□□□ -0.35
EIF3C-209ENST00000566501 DZIP3Q86Y13 1208 aaKnown RBP12.86□□□□□ -0.35
EIF3C-209ENST00000566501 MAP7D3Q8IWC1 876 aa12.86□□□□□ -0.35
EIF3C-209ENST00000566501 ENDOVQ8N8Q3 282 aaKnown RBP12.86□□□□□ -0.35
EIF3C-209ENST00000566501 WDR60Q8WVS4 1066 aa12.86□□□□□ -0.35
EIF3C-209ENST00000566501 SPIRE2Q8WWL2 714 aa12.86□□□□□ -0.35
EIF3C-209ENST00000566501 ZNF180Q9UJW8 692 aa12.86□□□□□ -0.35
EIF3C-209ENST00000566501 SOS2Q07890 1332 aaPredicted RBP12.85□□□□□ -0.35
EIF3C-209ENST00000566501 TRIM43BA6NCK2 446 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 PJA2O43164 708 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 GPAA1O43292 621 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 ASLP04424 464 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 CCDC166P0CW27 439 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 MLH1P40692 756 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 ATG9AQ7Z3C6 839 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 CTNNBL1Q8WYA6 563 aaPredicted RBP12.85□□□□□ -0.35
EIF3C-209ENST00000566501 FAM81BQ96LP2 452 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 DUSP9Q99956 384 aaKnown RBP12.85□□□□□ -0.35
EIF3C-209ENST00000566501 LY9Q9HBG7 655 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 FAM114A2Q9NRY5 505 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 BARX2Q9UMQ3 279 aaPredicted RBP12.85□□□□□ -0.35
EIF3C-209ENST00000566501 ABCA3Q99758 1704 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 MRC1P22897 1456 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 SIGLEC16A6NMB1 481 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 TMEM110-MUSTN1A8MSY1 372 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 PGRMC1O00264 195 aaKnown RBP12.85□□□□□ -0.35
EIF3C-209ENST00000566501 LYNP07948 512 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 GNAT2P19087 354 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 LIN52Q52LA3 116 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 TTI2Q6NXR4 508 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 TGS1Q96RS0 853 aaKnown RBP12.85□□□□□ -0.35
EIF3C-209ENST00000566501 CENPKQ9BS16 269 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 BRD8Q9H0E9 1235 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 LRMDAQ9H2I8 198 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 EPB41L4BQ9H329 900 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.85□□□□□ -0.35
EIF3C-209ENST00000566501 SUN2Q9UH99 717 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 TMEM59LQ9UK28 342 aa12.85□□□□□ -0.35
EIF3C-209ENST00000566501 TMEM120BA0PK00 339 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 O00370 1275 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 CAPN9O14815 690 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 TCIRG1Q13488 830 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 SH2D4BQ5SQS7 431 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 CGB2Q6NT52 195 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 LMOD2Q6P5Q4 547 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 RFX8Q6ZV50 586 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 HS2ST1Q7LGA3 356 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 AGGF1Q8N302 714 aaeCLIP12.84□□□□□ -0.35
EIF3C-209ENST00000566501 ZNF653Q96CK0 615 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 HAUS1Q96CS2 278 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 WDR37Q9Y2I8 494 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 NAT1P18440 290 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 MAP7Q14244 749 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 RTN1Q16799 776 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 CFAP157Q5JU67 520 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 ANKRD40Q6AI12 368 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 LRRC74BQ6ZQY2 392 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 ZNF554Q86TJ5 538 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 KBTBD2Q8IY47 623 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 GATA6Q92908 595 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 PGM2Q96G03 612 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 PHF12Q96QT6 1004 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 SIKE1Q9BRV8 207 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 OXCT2Q9BYC2 517 aaPredicted RBP12.84□□□□□ -0.35
EIF3C-209ENST00000566501 CCDC134Q9H6E4 229 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 INIPQ9NRY2 104 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 COMMD3-BMI1R4GMX3 469 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 MCM7P33993 719 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 HPCAP84074 193 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 TNIP1Q15025 636 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 SLC44A4Q53GD3 710 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 C3orf67Q6ZVT6 689 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 SCFD2Q8WU76 684 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 DHX36Q9H2U1 1008 aaKnown RBP12.84□□□□□ -0.35
EIF3C-209ENST00000566501 DCLRE1BQ9H816 532 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 SH3GLB1Q9Y371 365 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 SLC4A7Q9Y6M7 1214 aa12.84□□□□□ -0.35
EIF3C-209ENST00000566501 MYH4Q9Y623 1939 aa12.83□□□□□ -0.36
EIF3C-209ENST00000566501 A0A1W2PQJ5 194 aa12.83□□□□□ -0.36
EIF3C-209ENST00000566501 LSM1O15116 133 aaKnown RBP12.83□□□□□ -0.36
EIF3C-209ENST00000566501 LCA5LO95447 670 aa12.83□□□□□ -0.36
EIF3C-209ENST00000566501 PARP6Q2NL67 630 aa12.83□□□□□ -0.36
EIF3C-209ENST00000566501 SCUBE1Q8IWY4 988 aa12.83□□□□□ -0.36
EIF3C-209ENST00000566501 TMTC2Q8N394 836 aa12.83□□□□□ -0.36
EIF3C-209ENST00000566501 SMYD1Q8NB12 490 aa12.83□□□□□ -0.36
EIF3C-209ENST00000566501 PPFIBP2Q8ND30 876 aa12.83□□□□□ -0.36
EIF3C-209ENST00000566501 TANGO6Q9C0B7 1094 aa12.83□□□□□ -0.36
EIF3C-209ENST00000566501 CLIC5Q9NZA1 410 aa12.83□□□□□ -0.36
EIF3C-209ENST00000566501 TBC1D7Q9P0N9 293 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms