RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 GUCY2CP25092 1073 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 CCND2P30279 289 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 CCND3P30281 292 aaPredicted RBP18.57■□□□□ 0.56
RAB40C-210ENST00000566290 JAK3P52333 1124 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 ZNF131P52739 623 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 KRT76Q01546 638 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 GIT2Q14161 759 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 ANKRD40Q6AI12 368 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 SLC30A10Q6XR72 485 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 LRRC55Q6ZSA7 311 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 EPM2AIP1Q7L775 607 aaPredicted RBP18.57■□□□□ 0.56
RAB40C-210ENST00000566290 DYMQ7RTS9 669 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 VSIG10LQ86VR7 867 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 TMEM139Q8IV31 216 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 TC2NQ8N9U0 490 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 DNERQ8NFT8 737 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 NSUN6Q8TEA1 469 aaKnown RBP18.57■□□□□ 0.56
RAB40C-210ENST00000566290 RMDN3Q96TC7 470 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 TIPINQ9BVW5 301 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 SRRTQ9BXP5 876 aaKnown RBP18.57■□□□□ 0.56
RAB40C-210ENST00000566290 SEMA6BQ9H3T3 888 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 UNC45AQ9H3U1 944 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 DBR1Q9UK59 544 aaKnown RBP18.57■□□□□ 0.56
RAB40C-210ENST00000566290 COL4A3BPQ9Y5P4 624 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 LCTP09848 1927 aa18.57■□□□□ 0.56
RAB40C-210ENST00000566290 NFASCO94856 1347 aa18.56■□□□□ 0.56
RAB40C-210ENST00000566290 EIF3DO15371 548 aaKnown RBP eCLIP18.56■□□□□ 0.56
RAB40C-210ENST00000566290 GNA14O95837 355 aa18.56■□□□□ 0.56
RAB40C-210ENST00000566290 P4HBP07237 508 aaKnown RBP18.56■□□□□ 0.56
RAB40C-210ENST00000566290 COL6A1P12109 1028 aa18.56■□□□□ 0.56
RAB40C-210ENST00000566290 CYP2C19P33261 490 aa18.56■□□□□ 0.56
RAB40C-210ENST00000566290 MTMR1Q13613 665 aa18.56■□□□□ 0.56
RAB40C-210ENST00000566290 NFIL3Q16649 462 aa18.56■□□□□ 0.56
RAB40C-210ENST00000566290 DPP9Q86TI2 863 aa18.56■□□□□ 0.56
RAB40C-210ENST00000566290 IL31RAQ8NI17 732 aa18.56■□□□□ 0.56
RAB40C-210ENST00000566290 TAAR1Q96RJ0 339 aa18.56■□□□□ 0.56
RAB40C-210ENST00000566290 IWS1Q96ST2 819 aa18.56■□□□□ 0.56
RAB40C-210ENST00000566290 SLC39A2Q9NP94 309 aa18.56■□□□□ 0.56
RAB40C-210ENST00000566290 LOC102724159A0A0B4J2E5 919 aa18.55■□□□□ 0.56
RAB40C-210ENST00000566290 AKR1B15C9JRZ8 316 aaPredicted RBP18.55■□□□□ 0.56
RAB40C-210ENST00000566290 TPM1P09493 284 aa18.55■□□□□ 0.56
RAB40C-210ENST00000566290 FKBP3Q00688 224 aaKnown RBP18.55■□□□□ 0.56
RAB40C-210ENST00000566290 PWP2Q15269 919 aaKnown RBP18.55■□□□□ 0.56
RAB40C-210ENST00000566290 NLRX1Q86UT6 975 aa18.55■□□□□ 0.56
RAB40C-210ENST00000566290 ABRAQ8N0Z2 381 aa18.55■□□□□ 0.56
RAB40C-210ENST00000566290 TRPV1Q8NER1 839 aa18.55■□□□□ 0.56
RAB40C-210ENST00000566290 MYLIPQ8WY64 445 aa18.55■□□□□ 0.56
RAB40C-210ENST00000566290 CNOT6LQ96LI5 555 aaKnown RBP18.55■□□□□ 0.56
RAB40C-210ENST00000566290 PRIMPOLQ96LW4 560 aa18.55■□□□□ 0.56
RAB40C-210ENST00000566290 ERGIC2Q96RQ1 377 aa18.55■□□□□ 0.56
RAB40C-210ENST00000566290 MMP19Q99542 508 aa18.55■□□□□ 0.56
RAB40C-210ENST00000566290 CYP39A1Q9NYL5 469 aa18.55■□□□□ 0.56
RAB40C-210ENST00000566290 MAPK8IP1Q9UQF2 711 aa18.55■□□□□ 0.56
RAB40C-210ENST00000566290 TRAF3IP3Q9Y228 551 aa18.55■□□□□ 0.56
RAB40C-210ENST00000566290 ZNFX1Q9P2E3 1918 aaKnown RBP18.55■□□□□ 0.56
RAB40C-210ENST00000566290 GOLGA6L9A6NEM1 432 aa18.54■□□□□ 0.56
RAB40C-210ENST00000566290 TEX33O43247 280 aa18.54■□□□□ 0.56
RAB40C-210ENST00000566290 MFAP3LO75121 409 aa18.54■□□□□ 0.56
RAB40C-210ENST00000566290 MAPTP10636 758 aaKnown RBP18.54■□□□□ 0.56
RAB40C-210ENST00000566290 ZNF746Q6NUN9 644 aaPredicted RBP18.54■□□□□ 0.56
RAB40C-210ENST00000566290 RINT1Q6NUQ1 792 aa18.54■□□□□ 0.56
RAB40C-210ENST00000566290 NYAP1Q6ZVC0 841 aa18.54■□□□□ 0.56
RAB40C-210ENST00000566290 C1orf186Q6ZWK4 172 aa18.54■□□□□ 0.56
RAB40C-210ENST00000566290 PPFIBP1Q86W92 1011 aa18.54■□□□□ 0.56
RAB40C-210ENST00000566290 CCAR2Q8N163 923 aaKnown RBP18.54■□□□□ 0.56
RAB40C-210ENST00000566290 TMEM174Q8WUU8 243 aa18.54■□□□□ 0.56
RAB40C-210ENST00000566290 DYDC2Q96IM9 177 aa18.54■□□□□ 0.56
RAB40C-210ENST00000566290 REEP2Q9BRK0 252 aa18.54■□□□□ 0.56
RAB40C-210ENST00000566290 TUBGCP2Q9BSJ2 902 aa18.54■□□□□ 0.56
RAB40C-210ENST00000566290 NUP58Q9BVL2 599 aa18.54■□□□□ 0.56
RAB40C-210ENST00000566290 BHMT2Q9H2M3 363 aa18.54■□□□□ 0.56
RAB40C-210ENST00000566290 KCTD10Q9H3F6 313 aa18.54■□□□□ 0.56
RAB40C-210ENST00000566290 ZSWIM4Q9H7M6 989 aa18.54■□□□□ 0.56
RAB40C-210ENST00000566290 LRRC37A2A6NM11 1700 aa18.54■□□□□ 0.56
RAB40C-210ENST00000566290 CDH23Q9H251 3354 aa18.53■□□□□ 0.56
RAB40C-210ENST00000566290 DKC1O60832 514 aaKnown RBP eCLIP18.53■□□□□ 0.56
RAB40C-210ENST00000566290 TBCAO75347 108 aaKnown RBP18.53■□□□□ 0.56
RAB40C-210ENST00000566290 KRT18P05783 430 aaKnown RBP18.53■□□□□ 0.56
RAB40C-210ENST00000566290 NR3C2P08235 984 aa18.53■□□□□ 0.56
RAB40C-210ENST00000566290 ICAM3P32942 547 aa18.53■□□□□ 0.56
RAB40C-210ENST00000566290 PSMC6P62333 389 aa18.53■□□□□ 0.56
RAB40C-210ENST00000566290 PPP2R3AQ06190 1150 aa18.53■□□□□ 0.56
RAB40C-210ENST00000566290 ITGB3BPQ13352 177 aaPredicted RBP18.53■□□□□ 0.56
RAB40C-210ENST00000566290 ALCAMQ13740 583 aa18.53■□□□□ 0.56
RAB40C-210ENST00000566290 BAATQ14032 418 aaPredicted RBP18.53■□□□□ 0.56
RAB40C-210ENST00000566290 MAN2A1Q16706 1144 aa18.53■□□□□ 0.56
RAB40C-210ENST00000566290 ZNF792Q3KQV3 632 aa18.53■□□□□ 0.56
RAB40C-210ENST00000566290 HERC4Q5GLZ8 1057 aaPredicted RBP18.53■□□□□ 0.56
RAB40C-210ENST00000566290 ARHGEF16Q5VV41 709 aa18.53■□□□□ 0.56
RAB40C-210ENST00000566290 MIER3Q7Z3K6 550 aa18.53■□□□□ 0.56
RAB40C-210ENST00000566290 C4orf19Q8IY42 314 aa18.53■□□□□ 0.56
RAB40C-210ENST00000566290 SMAP1Q8IYB5 467 aaPredicted RBP18.53■□□□□ 0.56
RAB40C-210ENST00000566290 MAML3Q96JK9 1138 aa18.53■□□□□ 0.56
RAB40C-210ENST00000566290 LXNQ9BS40 222 aa18.53■□□□□ 0.56
RAB40C-210ENST00000566290 A1CFQ9NQ94 594 aaKnown RBP18.53■□□□□ 0.56
RAB40C-210ENST00000566290 HOMER2Q9NSB8 354 aa18.53■□□□□ 0.56
RAB40C-210ENST00000566290 TAB2Q9NYJ8 693 aa18.53■□□□□ 0.56
RAB40C-210ENST00000566290 A0A1W2PQJ5 194 aa18.52■□□□□ 0.56
RAB40C-210ENST00000566290 WDR64B1ANS9 1081 aa18.52■□□□□ 0.56
RAB40C-210ENST00000566290 PDXKO00764 312 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms