RNA–Protein interactions for RNA: ENST00000565832.5

CHD9-217, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 2,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-217ENST00000565832 FRMPD4Q14CM0 1322 aa6.9□□□□□ -1.31
CHD9-217ENST00000565832 ZC3H4Q9UPT8 1303 aaKnown RBP6.9□□□□□ -1.31
CHD9-217ENST00000565832 ZNFX1Q9P2E3 1918 aaKnown RBP6.9□□□□□ -1.31
CHD9-217ENST00000565832 MCM3APO60318 1980 aa6.9□□□□□ -1.31
CHD9-217ENST00000565832 USP27XA6NNY8 438 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 PES1O00541 588 aaKnown RBP6.89□□□□□ -1.31
CHD9-217ENST00000565832 N4BP3O15049 544 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 EYA4O95677 639 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 ADH1BP00325 375 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 MYBP10242 640 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 CCNE1P24864 410 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 KLK7P49862 253 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 PTPN5P54829 565 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 NPEPPSP55786 919 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 SOX10P56693 466 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 CCZ1BP86790 482 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 CCZ1P86791 482 aaPredicted RBP6.89□□□□□ -1.31
CHD9-217ENST00000565832 SETQ01105 290 aaPredicted RBP6.89□□□□□ -1.31
CHD9-217ENST00000565832 STIM1Q13586 685 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 EPHA7Q15375 998 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 ZC2HC1CQ53FD0 456 aaPredicted RBP6.89□□□□□ -1.31
CHD9-217ENST00000565832 CT47A1Q5JQC4 288 aaPredicted RBP6.89□□□□□ -1.31
CHD9-217ENST00000565832 FAM26FQ5R3K3 315 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 CENPPQ6IPU0 288 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 SFR1Q86XK3 245 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 PTPN18Q99952 460 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 PORCNQ9H237 461 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 EFCC1Q9HA90 598 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 RBBP6Q7Z6E9 1792 aaKnown RBP6.89□□□□□ -1.31
CHD9-217ENST00000565832 BTBD19C9JJ37 291 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 ZNF500O60304 480 aaPredicted RBP6.89□□□□□ -1.31
CHD9-217ENST00000565832 PRPF6O94906 941 aaKnown RBP6.89□□□□□ -1.31
CHD9-217ENST00000565832 KCNA2P16389 499 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 CCND2P30279 289 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 NMT1P30419 496 aaKnown RBP6.89□□□□□ -1.31
CHD9-217ENST00000565832 COPB1P53618 953 aaKnown RBP6.89□□□□□ -1.31
CHD9-217ENST00000565832 RBL2Q08999 1139 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 NOLC1Q14978 699 aaKnown RBP eCLIP6.89□□□□□ -1.31
CHD9-217ENST00000565832 PLA2G4FQ68DD2 849 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 SPECC1LQ69YQ0 1117 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 NYAP1Q6ZVC0 841 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 CYFIP1Q7L576 1253 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 RIOX2Q8IUF8 465 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 CCDC65Q8IXS2 484 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 CCDC155Q8N6L0 562 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 ANKRD13CQ8N6S4 541 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 ZNF516Q92618 1163 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 CCDC47Q96A33 483 aaKnown RBP6.89□□□□□ -1.31
CHD9-217ENST00000565832 INPP4AQ96PE3 977 aaPredicted RBP6.89□□□□□ -1.31
CHD9-217ENST00000565832 NACC1Q96RE7 527 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 OCSTAMPQ9BR26 566 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 TUFT1Q9NNX1 390 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 TRMT1Q9NXH9 659 aaKnown RBP6.89□□□□□ -1.31
CHD9-217ENST00000565832 LIMA1Q9UHB6 759 aaKnown RBP6.89□□□□□ -1.31
CHD9-217ENST00000565832 MKI67P46013 3256 aaKnown RBP6.89□□□□□ -1.31
CHD9-217ENST00000565832 DOCK3Q8IZD9 2030 aa6.89□□□□□ -1.31
CHD9-217ENST00000565832 WDR81Q562E7 1941 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 FRMD3A2A2Y4 597 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 B4DLN1 442 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 PDHXO00330 501 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 CBFA2T2O43439 604 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 ATP9BO43861 1147 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 P4HBP07237 508 aaKnown RBP6.88□□□□□ -1.31
CHD9-217ENST00000565832 PBX1P40424 430 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 UBXN1Q04323 297 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 TBX2Q13207 712 aaPredicted RBP6.88□□□□□ -1.31
CHD9-217ENST00000565832 SNAPC2Q13487 334 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 SWSAP1Q6NVH7 229 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 FASTKD5Q7L8L6 764 aaKnown RBP6.88□□□□□ -1.31
CHD9-217ENST00000565832 NIPA1Q7RTP0 329 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 TEX2Q8IWB9 1127 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 MYOCDQ8IZQ8 938 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 GUF1Q8N442 669 aaKnown RBP6.88□□□□□ -1.31
CHD9-217ENST00000565832 MYCT1Q8N699 235 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 CHST13Q8NET6 341 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 BRI3BPQ8WY22 251 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 TUBGCP2Q9BSJ2 902 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 LRRC27Q9C0I9 530 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 MRPL44Q9H9J2 332 aaKnown RBP6.88□□□□□ -1.31
CHD9-217ENST00000565832 GBA2Q9HCG7 927 aaPredicted RBP6.88□□□□□ -1.31
CHD9-217ENST00000565832 GPRC5CQ9NQ84 441 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 TBC1D22BQ9NU19 505 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 MYPNQ86TC9 1320 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 MYH11P35749 1972 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 CCL15-CCL14A0A0B4J2E2 113 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 CARNS1A5YM72 827 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 SPATA31C2B4DYI2 1134 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 BACH1O14867 736 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 ZNF862O60290 1169 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 ITGBL1O95965 494 aaPredicted RBP6.88□□□□□ -1.31
CHD9-217ENST00000565832 CASP14P31944 242 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 YWHABP31946 246 aaKnown RBP6.88□□□□□ -1.31
CHD9-217ENST00000565832 QARSP47897 775 aaKnown RBP6.88□□□□□ -1.31
CHD9-217ENST00000565832 FXR1P51114 621 aaKnown RBP eCLIP6.88□□□□□ -1.31
CHD9-217ENST00000565832 ALDH5A1P51649 535 aaPredicted RBP6.88□□□□□ -1.31
CHD9-217ENST00000565832 PSMD2Q13200 908 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 STXBP2Q15833 593 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 CCL15Q16663 113 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 LY6KQ17RY6 165 aa6.88□□□□□ -1.31
CHD9-217ENST00000565832 MIIPQ5JXC2 388 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms