RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 CLP1Q92989 425 aaKnown RBP18.79■□□□□ 0.6
USB1-211ENST00000565662 PPP2R3CQ969Q6 453 aa18.79■□□□□ 0.6
USB1-211ENST00000565662 MRPL38Q96DV4 380 aaKnown RBP18.79■□□□□ 0.6
USB1-211ENST00000565662 ELAC1Q9H777 363 aaKnown RBP18.79■□□□□ 0.6
USB1-211ENST00000565662 AGO3Q9H9G7 860 aaKnown RBP18.79■□□□□ 0.6
USB1-211ENST00000565662 SUGCTQ9HAC7 445 aa18.79■□□□□ 0.6
USB1-211ENST00000565662 RC3H2Q9HBD1 1191 aaKnown RBP18.79■□□□□ 0.6
USB1-211ENST00000565662 GINS2Q9Y248 185 aa18.79■□□□□ 0.6
USB1-211ENST00000565662 FSD2A1L4K1 749 aa18.78■□□□□ 0.6
USB1-211ENST00000565662 EDIL3O43854 480 aa18.78■□□□□ 0.6
USB1-211ENST00000565662 ZNF862O60290 1169 aa18.78■□□□□ 0.6
USB1-211ENST00000565662 DGKIO75912 1065 aa18.78■□□□□ 0.6
USB1-211ENST00000565662 ZSCAN20P17040 1043 aaPredicted RBP18.78■□□□□ 0.6
USB1-211ENST00000565662 EIF4BP23588 611 aaKnown RBP18.78■□□□□ 0.6
USB1-211ENST00000565662 RBM25P49756 843 aaKnown RBP18.78■□□□□ 0.6
USB1-211ENST00000565662 TMEM62Q0P6H9 643 aa18.78■□□□□ 0.6
USB1-211ENST00000565662 TMCO2Q7Z6W1 182 aaPredicted RBP18.78■□□□□ 0.6
USB1-211ENST00000565662 DIS3L2Q8IYB7 885 aaKnown RBP18.78■□□□□ 0.6
USB1-211ENST00000565662 LINC01465Q8N7H1 131 aa18.78■□□□□ 0.6
USB1-211ENST00000565662 GDPD5Q8WTR4 605 aa18.78■□□□□ 0.6
USB1-211ENST00000565662 SLC7A3Q8WY07 619 aa18.78■□□□□ 0.6
USB1-211ENST00000565662 P2RX5Q93086 422 aa18.78■□□□□ 0.6
USB1-211ENST00000565662 ZNF689Q96CS4 500 aaPredicted RBP18.78■□□□□ 0.6
USB1-211ENST00000565662 SCLT1Q96NL6 688 aa18.78■□□□□ 0.6
USB1-211ENST00000565662 ERVK-5Q9HDB9 667 aa18.78■□□□□ 0.6
USB1-211ENST00000565662 AAASQ9NRG9 546 aa18.78■□□□□ 0.6
USB1-211ENST00000565662 DACT1Q9NYF0 836 aa18.78■□□□□ 0.6
USB1-211ENST00000565662 DAXXQ9UER7 740 aaPredicted RBP18.78■□□□□ 0.6
USB1-211ENST00000565662 PCDHB7Q9Y5E2 793 aa18.78■□□□□ 0.6
USB1-211ENST00000565662 UNC80Q8N2C7 3258 aa18.78■□□□□ 0.6
USB1-211ENST00000565662 SLC37A4O43826 429 aa18.77■□□□□ 0.6
USB1-211ENST00000565662 GPR32O75388 356 aa18.77■□□□□ 0.6
USB1-211ENST00000565662 FDPSP14324 419 aaKnown RBP18.77■□□□□ 0.6
USB1-211ENST00000565662 SFPQP23246 707 aaKnown RBP eCLIP18.77■□□□□ 0.6
USB1-211ENST00000565662 RFC5P40937 340 aa18.77■□□□□ 0.6
USB1-211ENST00000565662 RABEP1Q15276 862 aa18.77■□□□□ 0.6
USB1-211ENST00000565662 EPHA7Q15375 998 aa18.77■□□□□ 0.6
USB1-211ENST00000565662 TARBP2Q15633 366 aaKnown RBP18.77■□□□□ 0.6
USB1-211ENST00000565662 KIZQ2M2Z5 673 aa18.77■□□□□ 0.6
USB1-211ENST00000565662 C4orf19Q8IY42 314 aa18.77■□□□□ 0.6
USB1-211ENST00000565662 NECAB1Q8N987 351 aa18.77■□□□□ 0.6
USB1-211ENST00000565662 FAM184AQ8NB25 1140 aa18.77■□□□□ 0.6
USB1-211ENST00000565662 HLA-CQ95604 372 aa18.77■□□□□ 0.6
USB1-211ENST00000565662 ASB2Q96Q27 587 aa18.77■□□□□ 0.6
USB1-211ENST00000565662 RGS18Q9NS28 235 aa18.77■□□□□ 0.6
USB1-211ENST00000565662 MTUS1Q9ULD2 1270 aa18.77■□□□□ 0.6
USB1-211ENST00000565662 PRRC2BQ5JSZ5 2229 aaKnown RBP18.76■□□□□ 0.59
USB1-211ENST00000565662 EPOPA6NHQ4 379 aa18.76■□□□□ 0.59
USB1-211ENST00000565662 NEMFO60524 1076 aa18.76■□□□□ 0.59
USB1-211ENST00000565662 LPXNO60711 386 aa18.76■□□□□ 0.59
USB1-211ENST00000565662 ARHGEF15O94989 841 aa18.76■□□□□ 0.59
USB1-211ENST00000565662 SKIP12755 728 aa18.76■□□□□ 0.59
USB1-211ENST00000565662 CTNNB1P35222 781 aa18.76■□□□□ 0.59
USB1-211ENST00000565662 MCM2P49736 904 aa18.76■□□□□ 0.59
USB1-211ENST00000565662 CLCN3P51790 818 aa18.76■□□□□ 0.59
USB1-211ENST00000565662 PCBP1Q15365 356 aaKnown RBP eCLIP18.76■□□□□ 0.59
USB1-211ENST00000565662 CCDC85BQ15834 202 aaPredicted RBP18.76■□□□□ 0.59
USB1-211ENST00000565662 C8orf34Q49A92 452 aa18.76■□□□□ 0.59
USB1-211ENST00000565662 TCP11Q8WWU5 503 aa18.76■□□□□ 0.59
USB1-211ENST00000565662 TNFRSF25Q93038 417 aa18.76■□□□□ 0.59
USB1-211ENST00000565662 C8orf76Q96K31 380 aa18.76■□□□□ 0.59
USB1-211ENST00000565662 OSMRQ99650 979 aa18.76■□□□□ 0.59
USB1-211ENST00000565662 C17orf80Q9BSJ5 609 aa18.76■□□□□ 0.59
USB1-211ENST00000565662 GCOM2Q9BZD3 368 aaPredicted RBP18.76■□□□□ 0.59
USB1-211ENST00000565662 FOXP1Q9H334 677 aaPredicted RBP18.76■□□□□ 0.59
USB1-211ENST00000565662 ZSWIM4Q9H7M6 989 aa18.76■□□□□ 0.59
USB1-211ENST00000565662 CHST12Q9NRB3 414 aa18.76■□□□□ 0.59
USB1-211ENST00000565662 TMEM161AQ9NX61 479 aa18.76■□□□□ 0.59
USB1-211ENST00000565662 VAV3Q9UKW4 847 aa18.76■□□□□ 0.59
USB1-211ENST00000565662 ST3GAL5Q9UNP4 418 aa18.76■□□□□ 0.59
USB1-211ENST00000565662 IGKV6-21A0A0C4DH24 114 aa18.75■□□□□ 0.59
USB1-211ENST00000565662 LARGE1O95461 756 aa18.75■□□□□ 0.59
USB1-211ENST00000565662 VTNP04004 478 aa18.75■□□□□ 0.59
USB1-211ENST00000565662 BMPR1AP36894 532 aa18.75■□□□□ 0.59
USB1-211ENST00000565662 TRAPPC10P48553 1259 aa18.75■□□□□ 0.59
USB1-211ENST00000565662 GPC3P51654 580 aa18.75■□□□□ 0.59
USB1-211ENST00000565662 NLRP11P59045 1033 aaKnown RBP18.75■□□□□ 0.59
USB1-211ENST00000565662 GPM6BQ13491 265 aa18.75■□□□□ 0.59
USB1-211ENST00000565662 GNL2Q13823 731 aaKnown RBP18.75■□□□□ 0.59
USB1-211ENST00000565662 CALCRLQ16602 461 aa18.75■□□□□ 0.59
USB1-211ENST00000565662 MTERF2Q49AM1 385 aa18.75■□□□□ 0.59
USB1-211ENST00000565662 KRT40Q6A162 431 aa18.75■□□□□ 0.59
USB1-211ENST00000565662 NLRP7Q8WX94 980 aa18.75■□□□□ 0.59
USB1-211ENST00000565662 COL25A1Q9BXS0 654 aaPredicted RBP18.75■□□□□ 0.59
USB1-211ENST00000565662 PCDHA12Q9UN75 941 aa18.75■□□□□ 0.59
USB1-211ENST00000565662 NOC2LQ9Y3T9 749 aaKnown RBP18.75■□□□□ 0.59
USB1-211ENST00000565662 EYSQ5T1H1 3165 aa18.75■□□□□ 0.59
USB1-211ENST00000565662 MAFO75444 373 aaPredicted RBP18.74■□□□□ 0.59
USB1-211ENST00000565662 NR5A1Q13285 461 aa18.74■□□□□ 0.59
USB1-211ENST00000565662 UGCGQ16739 394 aa18.74■□□□□ 0.59
USB1-211ENST00000565662 PUS10Q3MIT2 529 aaKnown RBP18.74■□□□□ 0.59
USB1-211ENST00000565662 TRMT1LQ7Z2T5 733 aaKnown RBP18.74■□□□□ 0.59
USB1-211ENST00000565662 FAM228AQ86W67 206 aa18.74■□□□□ 0.59
USB1-211ENST00000565662 POTEDQ86YR6 584 aa18.74■□□□□ 0.59
USB1-211ENST00000565662 CRIPAKQ8N1N5 446 aa18.74■□□□□ 0.59
USB1-211ENST00000565662 OXER1Q8TDS5 423 aa18.74■□□□□ 0.59
USB1-211ENST00000565662 LINC01599Q8WXQ3 324 aa18.74■□□□□ 0.59
USB1-211ENST00000565662 ZBTB10Q96DT7 871 aa18.74■□□□□ 0.59
USB1-211ENST00000565662 CCDC43Q96MW1 224 aaKnown RBP18.74■□□□□ 0.59
USB1-211ENST00000565662 UIMC1Q96RL1 719 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms