RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 BANK1Q8NDB2 785 aa28.98■■■□□ 2.23
NME3-208ENST00000565379 NT5C3AQ9H0P0 336 aa28.98■■■□□ 2.23
NME3-208ENST00000565379 RGL1Q9NZL6 768 aa28.98■■■□□ 2.23
NME3-208ENST00000565379 OATP04181 439 aa28.97■■■□□ 2.23
NME3-208ENST00000565379 SPATA31C1P0DKV0 1188 aa28.97■■■□□ 2.23
NME3-208ENST00000565379 GNAT1P11488 350 aa28.97■■■□□ 2.23
NME3-208ENST00000565379 MARK3P27448 753 aa28.97■■■□□ 2.23
NME3-208ENST00000565379 PRKCEQ02156 737 aa28.97■■■□□ 2.23
NME3-208ENST00000565379 CYP4A11Q02928 519 aa28.97■■■□□ 2.23
NME3-208ENST00000565379 CTTNQ14247 550 aaKnown RBP28.97■■■□□ 2.23
NME3-208ENST00000565379 UGCGQ16739 394 aa28.97■■■□□ 2.23
NME3-208ENST00000565379 OTUD6AQ7L8S5 288 aa28.97■■■□□ 2.23
NME3-208ENST00000565379 TMCO2Q7Z6W1 182 aaPredicted RBP28.97■■■□□ 2.23
NME3-208ENST00000565379 CCSER1Q9C0I3 900 aa28.97■■■□□ 2.23
NME3-208ENST00000565379 RNPEPQ9H4A4 650 aa28.97■■■□□ 2.23
NME3-208ENST00000565379 TRPC6Q9Y210 931 aa28.97■■■□□ 2.23
NME3-208ENST00000565379 PPME1Q9Y570 386 aa28.97■■■□□ 2.23
NME3-208ENST00000565379 NRCAMQ92823 1304 aa28.96■■■□□ 2.23
NME3-208ENST00000565379 PTPRSQ13332 1948 aa28.96■■■□□ 2.23
NME3-208ENST00000565379 RRN3P2A6NIE6 340 aa28.96■■■□□ 2.23
NME3-208ENST00000565379 TREHO43280 583 aa28.96■■■□□ 2.23
NME3-208ENST00000565379 ARHGEF15O94989 841 aa28.96■■■□□ 2.23
NME3-208ENST00000565379 ATP4AP20648 1035 aa28.96■■■□□ 2.23
NME3-208ENST00000565379 HOXC8P31273 242 aa28.96■■■□□ 2.23
NME3-208ENST00000565379 HYIQ5T013 277 aa28.96■■■□□ 2.23
NME3-208ENST00000565379 CABP7Q86V35 215 aa28.96■■■□□ 2.23
NME3-208ENST00000565379 USP38Q8NB14 1042 aa28.96■■■□□ 2.23
NME3-208ENST00000565379 CALML4Q96GE6 196 aa28.96■■■□□ 2.23
NME3-208ENST00000565379 CLIC6Q96NY7 704 aa28.96■■■□□ 2.23
NME3-208ENST00000565379 NACC1Q96RE7 527 aa28.96■■■□□ 2.23
NME3-208ENST00000565379 PCDHA7Q9UN72 937 aa28.96■■■□□ 2.23
NME3-208ENST00000565379 COL1A2P08123 1366 aa28.96■■■□□ 2.23
NME3-208ENST00000565379 C17orf102A2RUQ5 167 aa28.95■■■□□ 2.22
NME3-208ENST00000565379 ZNF862O60290 1169 aa28.95■■■□□ 2.22
NME3-208ENST00000565379 MED24O75448 989 aa28.95■■■□□ 2.22
NME3-208ENST00000565379 GRIN1Q05586 938 aa28.95■■■□□ 2.22
NME3-208ENST00000565379 ZNF484Q5JVG2 852 aa28.95■■■□□ 2.22
NME3-208ENST00000565379 ADALQ6DHV7 355 aa28.95■■■□□ 2.22
NME3-208ENST00000565379 CLEC17AQ6ZS10 378 aa28.95■■■□□ 2.22
NME3-208ENST00000565379 SERINC5Q86VE9 423 aa28.95■■■□□ 2.22
NME3-208ENST00000565379 CDK5RAP3Q96JB5 506 aa28.95■■■□□ 2.22
NME3-208ENST00000565379 NIFKQ9BYG3 293 aaKnown RBP28.95■■■□□ 2.22
NME3-208ENST00000565379 OSBPL7Q9BZF2 842 aa28.95■■■□□ 2.22
NME3-208ENST00000565379 SETD4Q9NVD3 440 aa28.95■■■□□ 2.22
NME3-208ENST00000565379 CCDC39Q9UFE4 941 aa28.95■■■□□ 2.22
NME3-208ENST00000565379 VCANP13611 3396 aa28.95■■■□□ 2.22
NME3-208ENST00000565379 ACTN1P12814 892 aa28.94■■■□□ 2.22
NME3-208ENST00000565379 PPFIA1Q13136 1202 aa28.94■■■□□ 2.22
NME3-208ENST00000565379 ADGRE1Q14246 886 aa28.94■■■□□ 2.22
NME3-208ENST00000565379 AXDND1Q5T1B0 1012 aaPredicted RBP28.94■■■□□ 2.22
NME3-208ENST00000565379 MMTAG2Q9BU76 263 aaKnown RBP28.94■■■□□ 2.22
NME3-208ENST00000565379 SLC28A3Q9HAS3 691 aa28.94■■■□□ 2.22
NME3-208ENST00000565379 ANKEF1Q9NU02 776 aa28.94■■■□□ 2.22
NME3-208ENST00000565379 PP2D1A8MPX8 630 aa28.93■■■□□ 2.22
NME3-208ENST00000565379 YWHABP31946 246 aaKnown RBP28.93■■■□□ 2.22
NME3-208ENST00000565379 CHAMP1Q96JM3 812 aa28.93■■■□□ 2.22
NME3-208ENST00000565379 PCDHA11Q9Y5I1 949 aa28.93■■■□□ 2.22
NME3-208ENST00000565379 TTC28Q96AY4 2481 aa28.93■■■□□ 2.22
NME3-208ENST00000565379 MYH9P35579 1960 aaKnown RBP28.92■■■□□ 2.22
NME3-208ENST00000565379 DDX11L8A8MPP1 907 aa28.92■■■□□ 2.22
NME3-208ENST00000565379 CXCL10P02778 98 aa28.92■■■□□ 2.22
NME3-208ENST00000565379 CDC25AP30304 524 aa28.92■■■□□ 2.22
NME3-208ENST00000565379 THPOP40225 353 aa28.92■■■□□ 2.22
NME3-208ENST00000565379 DEFB103AP81534 67 aa28.92■■■□□ 2.22
NME3-208ENST00000565379 SPRED2Q7Z698 418 aa28.92■■■□□ 2.22
NME3-208ENST00000565379 EXOC8Q8IYI6 725 aa28.92■■■□□ 2.22
NME3-208ENST00000565379 RASSF8Q8NHQ8 419 aa28.92■■■□□ 2.22
NME3-208ENST00000565379 FAM13BQ9NYF5 915 aa28.92■■■□□ 2.22
NME3-208ENST00000565379 WRAP73Q9P2S5 460 aaPredicted RBP28.92■■■□□ 2.22
NME3-208ENST00000565379 STBD1O95210 358 aa28.91■■■□□ 2.22
NME3-208ENST00000565379 CA3P07451 260 aa28.91■■■□□ 2.22
NME3-208ENST00000565379 INSRRP14616 1297 aa28.91■■■□□ 2.22
NME3-208ENST00000565379 WDR5P61964 334 aaKnown RBP28.91■■■□□ 2.22
NME3-208ENST00000565379 GRIK4Q16099 956 aa28.91■■■□□ 2.22
NME3-208ENST00000565379 PPP2R2DQ66LE6 453 aa28.91■■■□□ 2.22
NME3-208ENST00000565379 PYM1Q9BRP8 204 aaKnown RBP28.91■■■□□ 2.22
NME3-208ENST00000565379 SEPT9Q9UHD8 586 aaPredicted RBP28.91■■■□□ 2.22
NME3-208ENST00000565379 DBR1Q9UK59 544 aaKnown RBP28.91■■■□□ 2.22
NME3-208ENST00000565379 KIAA1024Q9UPX6 916 aa28.91■■■□□ 2.22
NME3-208ENST00000565379 DNM3Q9UQ16 869 aa28.91■■■□□ 2.22
NME3-208ENST00000565379 A0A1W2PQ27 194 aa28.9■■■□□ 2.22
NME3-208ENST00000565379 A0A1W2PQ64 194 aa28.9■■■□□ 2.22
NME3-208ENST00000565379 A0A1W2PQD8 194 aa28.9■■■□□ 2.22
NME3-208ENST00000565379 TRANK1O15050 2925 aa28.9■■■□□ 2.22
NME3-208ENST00000565379 CTSHP09668 335 aa28.9■■■□□ 2.22
NME3-208ENST00000565379 CMA1P23946 247 aa28.9■■■□□ 2.22
NME3-208ENST00000565379 TJAP1Q5JTD0 557 aa28.9■■■□□ 2.22
NME3-208ENST00000565379 ANO5Q75V66 913 aa28.9■■■□□ 2.22
NME3-208ENST00000565379 HERC6Q8IVU3 1022 aa28.9■■■□□ 2.22
NME3-208ENST00000565379 LMBR1Q8WVP7 490 aa28.9■■■□□ 2.22
NME3-208ENST00000565379 EPSTI1Q96J88 318 aa28.9■■■□□ 2.22
NME3-208ENST00000565379 CCDC43Q96MW1 224 aaKnown RBP28.9■■■□□ 2.22
NME3-208ENST00000565379 GBP4Q96PP9 640 aa28.9■■■□□ 2.22
NME3-208ENST00000565379 DDX19AQ9NUU7 478 aaKnown RBP28.9■■■□□ 2.22
NME3-208ENST00000565379 REV3LO60673 3130 aa28.9■■■□□ 2.22
NME3-208ENST00000565379 GOLGA6L4A6NEF3 574 aa28.89■■■□□ 2.22
NME3-208ENST00000565379 MAGEB2O15479 319 aa28.89■■■□□ 2.22
NME3-208ENST00000565379 TMEM119Q4V9L6 283 aa28.89■■■□□ 2.22
NME3-208ENST00000565379 SPECC1Q5M775 1068 aa28.89■■■□□ 2.22
NME3-208ENST00000565379 RESP18Q5W5W9 173 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms