RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 BRSK2Q8IWQ3 736 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 CHCHD4Q8N4Q1 142 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 DCLK2Q8N568 766 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 MRPL50Q8N5N7 158 aaKnown RBP6.77□□□□□ -1.33
PTPN9-204ENST00000564970 CALML6Q8TD86 181 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 SCFD1Q8WVM8 642 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 GAB3Q8WWW8 586 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 RAPGEF5Q92565 580 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 AKT1S1Q96B36 256 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 SYTL4Q96C24 671 aaPredicted RBP6.77□□□□□ -1.33
PTPN9-204ENST00000564970 ZNF317Q96PQ6 595 aaPredicted RBP6.77□□□□□ -1.33
PTPN9-204ENST00000564970 PSKH2Q96QS6 385 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 ZNF184Q99676 751 aaPredicted RBP6.77□□□□□ -1.33
PTPN9-204ENST00000564970 SPOCK3Q9BQ16 436 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 SEMA4AQ9H3S1 761 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 OCEL1Q9H607 264 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 C1orf115Q9H7X2 142 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 VTA1Q9NP79 307 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 LZTFL1Q9NQ48 299 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 CYLDQ9NQC7 956 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 TBC1D23Q9NUY8 699 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 TRIM10Q9UDY6 481 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 DNAJC12Q9UKB3 198 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 ANGPTL2Q9UKU9 493 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 DMTF1Q9Y222 760 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 USP20Q9Y2K6 914 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 ARL2BPQ9Y2Y0 163 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 USP15Q9Y4E8 981 aaPredicted RBP6.77□□□□□ -1.33
PTPN9-204ENST00000564970 A2MP01023 1474 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 AKAP12Q02952 1782 aa6.77□□□□□ -1.33
PTPN9-204ENST00000564970 MROH7-TTC4A0A0A0MT08 1334 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 ATP7AQ04656 1500 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 ARPC4-TTLL3A0A0A6YYG9 625 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.76□□□□□ -1.33
PTPN9-204ENST00000564970 SIGLEC16A6NMB1 481 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 A8MXQ7 604 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 KIF28PB7ZC32 967 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 ALOX15BO15296 676 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 PEX11AO75192 247 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 GJB6O95452 261 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 OXSR1O95747 527 aaPredicted RBP6.76□□□□□ -1.33
PTPN9-204ENST00000564970 LYNP07948 512 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 VCLP18206 1134 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 CMA1P23946 247 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 LMOD1P29536 600 aaPredicted RBP6.76□□□□□ -1.33
PTPN9-204ENST00000564970 NUP107P57740 925 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 ZC3H6P61129 1189 aaKnown RBP6.76□□□□□ -1.33
PTPN9-204ENST00000564970 ATP6V0D1P61421 351 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 B2MP61769 119 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 ARHGAP4P98171 946 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 GUCY2DQ02846 1103 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 GALNT1Q10472 559 aaPredicted RBP6.76□□□□□ -1.33
PTPN9-204ENST00000564970 NFE2L1Q14494 772 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 NR1I3Q14994 352 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 SF3B3Q15393 1217 aaKnown RBP6.76□□□□□ -1.33
PTPN9-204ENST00000564970 CCDC6Q16204 474 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 SH3D19Q5HYK7 790 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 ZBTB41Q5SVQ8 909 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 FCRLBQ6BAA4 426 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 SNRNP48Q6IEG0 339 aaKnown RBP6.76□□□□□ -1.33
PTPN9-204ENST00000564970 NIPAL1Q6NVV3 410 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 DUS1LQ6P1R4 473 aaKnown RBP6.76□□□□□ -1.33
PTPN9-204ENST00000564970 CEP85Q6P2H3 762 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 ACAD11Q709F0 780 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 BEND5Q7L4P6 421 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 HDGFL2Q7Z4V5 671 aaPredicted RBP6.76□□□□□ -1.33
PTPN9-204ENST00000564970 FAM20CQ8IXL6 584 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 PLPP6Q8IY26 295 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 ARHGAP24Q8N264 748 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 LINC00469Q8N7U9 141 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 NKX2-3Q8TAU0 364 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 ANKRD49Q8WVL7 239 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 CFAP36Q96G28 342 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 GPATCH3Q96I76 525 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 CDHR1Q96JP9 859 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 CCDC43Q96MW1 224 aaKnown RBP6.76□□□□□ -1.33
PTPN9-204ENST00000564970 NUDCD1Q96RS6 583 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 PLEKHF1Q96S99 279 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 CTRCQ99895 268 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 AGXT2Q9BYV1 514 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 ZCWPW1Q9H0M4 648 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 THAP9Q9H5L6 903 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 CD209Q9NNX6 404 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 POLR3EQ9NVU0 708 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 FANCLQ9NW38 375 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 ARHGEF38Q9NXL2 777 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 DBF4Q9UBU7 674 aaPredicted RBP6.76□□□□□ -1.33
PTPN9-204ENST00000564970 SEC63Q9UGP8 760 aaKnown RBP6.76□□□□□ -1.33
PTPN9-204ENST00000564970 PADI4Q9UM07 663 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 FAF1Q9UNN5 650 aaPredicted RBP6.76□□□□□ -1.33
PTPN9-204ENST00000564970 RABGAP1Q9Y3P9 1069 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 ZNF711Q9Y462 761 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 PCDHGB3Q9Y5G1 929 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 CD2APQ9Y5K6 639 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 ZMYM6O95789 1325 aa6.76□□□□□ -1.33
PTPN9-204ENST00000564970 SAMD9LQ8IVG5 1584 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 ARHGEF10O15013 1369 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 SOBPA7XYQ1 873 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 NOTOA8MTQ0 251 aa6.75□□□□□ -1.33
PTPN9-204ENST00000564970 RASA4BC9J798 803 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms