RNA–Protein interactions for RNA: ENST00000564890.1

PKD1-229, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 574 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-229ENST00000564890 USP38Q8NB14 1042 aa20.8■□□□□ 0.92
PKD1-229ENST00000564890 TUFT1Q9NNX1 390 aa20.8■□□□□ 0.92
PKD1-229ENST00000564890 MSRAQ9UJ68 235 aa20.8■□□□□ 0.92
PKD1-229ENST00000564890 PPME1Q9Y570 386 aa20.8■□□□□ 0.92
PKD1-229ENST00000564890 GPR32O75388 356 aa20.79■□□□□ 0.92
PKD1-229ENST00000564890 MAFO75444 373 aaPredicted RBP20.79■□□□□ 0.92
PKD1-229ENST00000564890 MED24O75448 989 aa20.79■□□□□ 0.92
PKD1-229ENST00000564890 SPATA31C1P0DKV0 1188 aa20.79■□□□□ 0.92
PKD1-229ENST00000564890 PRPHP41219 470 aa20.79■□□□□ 0.92
PKD1-229ENST00000564890 DNM2P50570 870 aa20.79■□□□□ 0.92
PKD1-229ENST00000564890 CRYBB1P53674 252 aaPredicted RBP20.79■□□□□ 0.92
PKD1-229ENST00000564890 MKRN4PQ13434 485 aaPredicted RBP20.79■□□□□ 0.92
PKD1-229ENST00000564890 DRP2Q13474 957 aa20.79■□□□□ 0.92
PKD1-229ENST00000564890 XKR9Q5GH70 373 aa20.79■□□□□ 0.92
PKD1-229ENST00000564890 ZNF697Q5TEC3 545 aa20.79■□□□□ 0.92
PKD1-229ENST00000564890 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.79■□□□□ 0.92
PKD1-229ENST00000564890 CATSPER3Q86XQ3 398 aa20.79■□□□□ 0.92
PKD1-229ENST00000564890 HERC6Q8IVU3 1022 aa20.79■□□□□ 0.92
PKD1-229ENST00000564890 DEFB123Q8N688 67 aa20.79■□□□□ 0.92
PKD1-229ENST00000564890 TIFAQ96CG3 184 aa20.79■□□□□ 0.92
PKD1-229ENST00000564890 OSMRQ99650 979 aa20.79■□□□□ 0.92
PKD1-229ENST00000564890 JPH2Q9BR39 696 aaPredicted RBP20.79■□□□□ 0.92
PKD1-229ENST00000564890 POLR3CQ9BUI4 534 aaPredicted RBP20.79■□□□□ 0.92
PKD1-229ENST00000564890 LAMA2P24043 3122 aaKnown RBP20.79■□□□□ 0.92
PKD1-229ENST00000564890 MICAL3Q7RTP6 2002 aa20.78■□□□□ 0.92
PKD1-229ENST00000564890 AMHP03971 560 aa20.78■□□□□ 0.92
PKD1-229ENST00000564890 RFC5P40937 340 aa20.78■□□□□ 0.92
PKD1-229ENST00000564890 POLGP54098 1239 aaPredicted RBP20.78■□□□□ 0.92
PKD1-229ENST00000564890 NLRP11P59045 1033 aaKnown RBP20.78■□□□□ 0.92
PKD1-229ENST00000564890 ATP2C1P98194 919 aaPredicted RBP20.78■□□□□ 0.92
PKD1-229ENST00000564890 PAK2Q13177 524 aa20.78■□□□□ 0.92
PKD1-229ENST00000564890 PDIA5Q14554 519 aa20.78■□□□□ 0.92
PKD1-229ENST00000564890 TMCO2Q7Z6W1 182 aaPredicted RBP20.78■□□□□ 0.92
PKD1-229ENST00000564890 TMEM40Q8WWA1 233 aa20.78■□□□□ 0.92
PKD1-229ENST00000564890 SLC7A3Q8WY07 619 aa20.78■□□□□ 0.92
PKD1-229ENST00000564890 ZNF668Q96K58 619 aaPredicted RBP20.78■□□□□ 0.92
PKD1-229ENST00000564890 RAB34Q9BZG1 259 aa20.78■□□□□ 0.92
PKD1-229ENST00000564890 ADAMTS10Q9H324 1103 aa20.78■□□□□ 0.92
PKD1-229ENST00000564890 ANKEF1Q9NU02 776 aa20.78■□□□□ 0.92
PKD1-229ENST00000564890 LRWD1Q9UFC0 647 aa20.78■□□□□ 0.92
PKD1-229ENST00000564890 PADI3Q9ULW8 664 aa20.78■□□□□ 0.92
PKD1-229ENST00000564890 MTMR6Q9Y217 621 aa20.78■□□□□ 0.92
PKD1-229ENST00000564890 YBX2Q9Y2T7 364 aaKnown RBP20.78■□□□□ 0.92
PKD1-229ENST00000564890 PCDHA11Q9Y5I1 949 aa20.78■□□□□ 0.92
PKD1-229ENST00000564890 LOXHD1Q8IVV2 1947 aa20.77■□□□□ 0.92
PKD1-229ENST00000564890 STX6O43752 255 aa20.77■□□□□ 0.92
PKD1-229ENST00000564890 RPS6KA5O75582 802 aa20.77■□□□□ 0.92
PKD1-229ENST00000564890 MYOGP15173 224 aa20.77■□□□□ 0.92
PKD1-229ENST00000564890 RPA1P27694 616 aa20.77■□□□□ 0.92
PKD1-229ENST00000564890 GPC3P51654 580 aa20.77■□□□□ 0.92
PKD1-229ENST00000564890 RESTQ13127 1097 aa20.77■□□□□ 0.92
PKD1-229ENST00000564890 IL17AQ16552 155 aa20.77■□□□□ 0.92
PKD1-229ENST00000564890 HAUS3Q68CZ6 603 aa20.77■□□□□ 0.92
PKD1-229ENST00000564890 DTHD1Q6ZMT9 781 aa20.77■□□□□ 0.92
PKD1-229ENST00000564890 EXOC8Q8IYI6 725 aa20.77■□□□□ 0.92
PKD1-229ENST00000564890 MYOCDQ8IZQ8 938 aa20.77■□□□□ 0.92
PKD1-229ENST00000564890 ZNF710Q8N1W2 664 aa20.77■□□□□ 0.92
PKD1-229ENST00000564890 IGSF22Q8N9C0 903 aa20.77■□□□□ 0.92
PKD1-229ENST00000564890 PIGOQ8TEQ8 1089 aa20.77■□□□□ 0.92
PKD1-229ENST00000564890 CCDC43Q96MW1 224 aaKnown RBP20.77■□□□□ 0.92
PKD1-229ENST00000564890 FAM161BQ96MY7 647 aa20.77■□□□□ 0.92
PKD1-229ENST00000564890 SCLT1Q96NL6 688 aa20.77■□□□□ 0.92
PKD1-229ENST00000564890 NKX2-4Q9H2Z4 354 aa20.77■□□□□ 0.92
PKD1-229ENST00000564890 DHX33Q9H6R0 707 aaKnown RBP20.77■□□□□ 0.92
PKD1-229ENST00000564890 BMP2KQ9NSY1 1161 aaPredicted RBP20.77■□□□□ 0.92
PKD1-229ENST00000564890 SUCLA2Q9P2R7 463 aaPredicted RBP20.77■□□□□ 0.92
PKD1-229ENST00000564890 NOC2LQ9Y3T9 749 aaKnown RBP20.77■□□□□ 0.92
PKD1-229ENST00000564890 PTPRSQ13332 1948 aa20.76■□□□□ 0.91
PKD1-229ENST00000564890 SZT2Q5T011 3432 aa20.76■□□□□ 0.91
PKD1-229ENST00000564890 GBF1Q92538 1859 aa20.76■□□□□ 0.91
PKD1-229ENST00000564890 TMEM265A0A087WTH1 108 aa20.76■□□□□ 0.91
PKD1-229ENST00000564890 A0A087WWV3 80 aa20.76■□□□□ 0.91
PKD1-229ENST00000564890 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.76■□□□□ 0.91
PKD1-229ENST00000564890 CCT6AP40227 531 aaKnown RBP20.76■□□□□ 0.91
PKD1-229ENST00000564890 EMC2Q15006 297 aa20.76■□□□□ 0.91
PKD1-229ENST00000564890 POTEGQ6S5H5 508 aa20.76■□□□□ 0.91
PKD1-229ENST00000564890 SPRYD3Q8NCJ5 442 aa20.76■□□□□ 0.91
PKD1-229ENST00000564890 NLRP7Q8WX94 980 aa20.76■□□□□ 0.91
PKD1-229ENST00000564890 ZBED2Q9BTP6 218 aa20.76■□□□□ 0.91
PKD1-229ENST00000564890 TTYH1Q9H313 450 aaPredicted RBP20.76■□□□□ 0.91
PKD1-229ENST00000564890 TLL1O43897 1013 aa20.75■□□□□ 0.91
PKD1-229ENST00000564890 XRCC6P12956 609 aaKnown RBP eCLIP20.75■□□□□ 0.91
PKD1-229ENST00000564890 RARRES1P49788 294 aa20.75■□□□□ 0.91
PKD1-229ENST00000564890 NFX1Q12986 1120 aaKnown RBP20.75■□□□□ 0.91
PKD1-229ENST00000564890 FAM117BQ6P1L5 589 aa20.75■□□□□ 0.91
PKD1-229ENST00000564890 SNX29Q8TEQ0 813 aa20.75■□□□□ 0.91
PKD1-229ENST00000564890 TMEM143Q96AN5 459 aa20.75■□□□□ 0.91
PKD1-229ENST00000564890 NACC1Q96RE7 527 aa20.75■□□□□ 0.91
PKD1-229ENST00000564890 SEMA6BQ9H3T3 888 aa20.75■□□□□ 0.91
PKD1-229ENST00000564890 ERVK-5Q9HDB9 667 aa20.75■□□□□ 0.91
PKD1-229ENST00000564890 STK24Q9Y6E0 443 aa20.75■□□□□ 0.91
PKD1-229ENST00000564890 ARID2Q68CP9 1835 aa20.74■□□□□ 0.91
PKD1-229ENST00000564890 PP2D1A8MPX8 630 aa20.74■□□□□ 0.91
PKD1-229ENST00000564890 ENPP3O14638 875 aa20.74■□□□□ 0.91
PKD1-229ENST00000564890 GPR182O15218 404 aa20.74■□□□□ 0.91
PKD1-229ENST00000564890 GAS2O43903 313 aaKnown RBP20.74■□□□□ 0.91
PKD1-229ENST00000564890 GJB5O95377 273 aa20.74■□□□□ 0.91
PKD1-229ENST00000564890 BMP15O95972 392 aa20.74■□□□□ 0.91
PKD1-229ENST00000564890 MUTP22033 750 aa20.74■□□□□ 0.91
PKD1-229ENST00000564890 CDC42EP1Q00587 391 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms