RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	ATAD3B	Q5T9A4	648 aa		4.56	□□□□□ -1.68
MACF1-231	ENST00000564288	OGFOD1	Q8N543	542 aa		4.56	□□□□□ -1.68
MACF1-231	ENST00000564288	ESCO1	Q5FWF5	840 aa		4.56	□□□□□ -1.68
MACF1-231	ENST00000564288	LPIN2	Q92539	896 aa		4.56	□□□□□ -1.68
MACF1-231	ENST00000564288	KDM3A	Q9Y4C1	1321 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	PIK3CD	O00329	1044 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	SNRPA1	P09661	255 aa	Known RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	CPA1	P15085	419 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	ACADVL	P49748	655 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	RGS21	Q2M5E4	152 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	CADPS2	Q86UW7	1296 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	MKL1	Q969V6	931 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	NSF	P46459	744 aa	Known RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	MAN2A1	Q16706	1144 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	PAF1	Q8N7H5	531 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288		H3BNX3	289 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	CDH16	O75309	829 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	TMOD1	P28289	359 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	TRIM16L	Q309B1	348 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	GJC2	Q5T442	439 aa	Predicted RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	RANBP17	Q9H2T7	1088 aa	Known RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	MCM9	Q9NXL9	1143 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	DMRT2	Q9Y5R5	561 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	SQOR	Q9Y6N5	450 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	HSD17B3	P37058	310 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	IFIT1B	Q5T764	474 aa	Known RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	STAG2	Q8N3U4	1231 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	PAWR	Q96IZ0	340 aa	Known RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	MID2	Q9UJV3	735 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	DEAF1	O75398	565 aa	Predicted RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	BNIP1	Q12981	228 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	MYBPC2	Q14324	1141 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	TTC39C	Q8N584	583 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	MAP3K2	Q9Y2U5	619 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	PALM	O75781	387 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	ACTN1	P12814	892 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	MTTP	P55157	894 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	ARID5A	Q03989	594 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	ANKRD13C	Q8N6S4	541 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	NOA1	Q8NC60	698 aa	Known RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	FAM227B	Q96M60	508 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	WNT8A	Q9H1J5	351 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	TMOD4	Q9NZQ9	345 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	USP42	Q9H9J4	1324 aa	Known RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	DPPA5	A6NC42	116 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	ARFIP2	P53365	341 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	HERC4	Q5GLZ8	1057 aa	Predicted RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	GIPC3	Q8TF64	312 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	COQ7	Q99807	217 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	ARHGEF3	Q9NR81	526 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	WDR35	Q9P2L0	1181 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	ECEL1	O95672	775 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	TRMT5	Q32P41	509 aa	Known RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	DTX3L	Q8TDB6	740 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	MAGEB18	Q96M61	343 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	HINFP	Q9BQA5	517 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	FRMD8	Q9BZ67	464 aa	Predicted RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	HBS1L	Q9Y450	684 aa	Known RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	SERPINI2	O75830	405 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	ADD1	P35611	737 aa	Known RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	ADCK5	Q3MIX3	580 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	NANOGNB	Q7Z5D8	188 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	IMPG2	Q9BZV3	1241 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	FADS3	Q9Y5Q0	445 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	VDR	P11473	427 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	ADSL	P30566	484 aa	Predicted RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	TSC22D1	Q15714	1073 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	RAD9B	Q6WBX8	426 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	EPAS1	Q99814	870 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	ATP6V0A2	Q9Y487	856 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	ZFYVE16	Q7Z3T8	1539 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	IFNAR1	P17181	557 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	KIF23	Q02241	960 aa	Predicted RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	DPY19L2	Q6NUT2	758 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	MTBP	Q96DY7	904 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	MAD1L1	Q9Y6D9	718 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	IQANK1	A0A1B0GTG1	560 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	PPP2R5C	Q13362	524 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	CNGA3	Q16281	694 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	ERICH1	Q86X53	443 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	APPBP2	Q92624	585 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	PTPRN2	Q92932	1015 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	NT5C3A	Q9H0P0	336 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	TMED5	Q9Y3A6	229 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	STARD13	Q9Y3M8	1113 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	GOLGA8T	H3BQL2	631 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	HGS	O14964	777 aa	Predicted RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	XPOT	O43592	962 aa	Known RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	GOLGA8H	P0CJ92	632 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	PDHB	P11177	359 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	CD151	P48509	253 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	ITGB3BP	Q13352	177 aa	Predicted RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	VPS11	Q9H270	941 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	RAD21L1	Q9H4I0	556 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	FAM237A	A0A1B0GTK4	181 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	HNRNPR	O43390	633 aa	Known RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	KRT76	Q01546	638 aa		4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	PRMT1	Q99873	361 aa	Known RBP	4.55	□□□□□ -1.68
MACF1-231	ENST00000564288	MYO3A	Q8NEV4	1616 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms