RNA–Protein interactions for RNA: ENST00000562602.1

CFDP1-202, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 699 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-202ENST00000562602 SEL1LQ9UBV2 794 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 POLLQ9UGP5 575 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 KIAA1024Q9UPX6 916 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 RABGAP1Q9Y3P9 1069 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 PCDHA2Q9Y5H9 948 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 PCDHA1Q9Y5I3 950 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 TLL2Q9Y6L7 1015 aa8.2□□□□□ -1.1
CFDP1-202ENST00000562602 FRMPD2Q68DX3 1309 aaPredicted RBP8.2□□□□□ -1.1
CFDP1-202ENST00000562602 DDX60LQ5H9U9 1706 aaKnown RBP8.2□□□□□ -1.1
CFDP1-202ENST00000562602 GOLGA6L10A6NI86 522 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 SPDYE3A6NKU9 549 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 CCDC188H7C350 402 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 PDE2AO00408 941 aaPredicted RBP8.19□□□□□ -1.1
CFDP1-202ENST00000562602 MPHOSPH10O00566 681 aaKnown RBP8.19□□□□□ -1.1
CFDP1-202ENST00000562602 TBCAO75347 108 aaKnown RBP8.19□□□□□ -1.1
CFDP1-202ENST00000562602 SSBP05455 408 aaKnown RBP eCLIP8.19□□□□□ -1.1
CFDP1-202ENST00000562602 CYP3A4P08684 503 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 XRCC5P13010 732 aaKnown RBP8.19□□□□□ -1.1
CFDP1-202ENST00000562602 FERP16591 822 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 RFX1P22670 979 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 SHMT1P34896 483 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 PDE6BP35913 854 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 SLC12A3P55017 1021 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 POLR2FP61218 127 aaKnown RBP8.19□□□□□ -1.1
CFDP1-202ENST00000562602 KCNMA1Q12791 1236 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 MTMR3Q13615 1198 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 MYBPC2Q14324 1141 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 RPS6KA1Q15418 735 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 SLC15A2Q16348 729 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 EXOC3L4Q17RC7 722 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 SPDYCQ5MJ68 293 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 MEI1Q5TIA1 1274 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 KLHDC7AQ5VTJ3 777 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 PRPF38BQ5VTL8 546 aaKnown RBP8.19□□□□□ -1.1
CFDP1-202ENST00000562602 SLFN13Q68D06 897 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 LRIG3Q6UXM1 1119 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 MICALCLQ6ZW33 695 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 B4GALNT4Q76KP1 1039 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 SND1Q7KZF4 910 aaKnown RBP eCLIP8.19□□□□□ -1.1
CFDP1-202ENST00000562602 KRT26Q7Z3Y9 468 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 SRLQ86TD4 932 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 CCDC125Q86Z20 511 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 LRRC47Q8N1G4 583 aaKnown RBP8.19□□□□□ -1.1
CFDP1-202ENST00000562602 ARFGAP2Q8N6H7 521 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 FLAD1Q8NFF5 587 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 ACTRT1Q8TDG2 376 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 PPM1EQ8WY54 764 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 ZDHHC15Q96MV8 337 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 SPAG5Q96R06 1193 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 NAP1L3Q99457 506 aaPredicted RBP8.19□□□□□ -1.1
CFDP1-202ENST00000562602 TLR10Q9BXR5 811 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 IDI2Q9BXS1 227 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 KCTD10Q9H3F6 313 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 GDF3Q9NR23 364 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 TYW1Q9NV66 732 aaKnown RBP8.19□□□□□ -1.1
CFDP1-202ENST00000562602 MAP10Q9P2G4 905 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 HDAC9Q9UKV0 1011 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 CAPN6Q9Y6Q1 641 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 DUSP10Q9Y6W6 482 aa8.19□□□□□ -1.1
CFDP1-202ENST00000562602 BTAF1O14981 1849 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 USP17L10C9JJH3 530 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 PIK3CDO00329 1044 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 TERTO14746 1132 aaKnown RBP8.18□□□□□ -1.1
CFDP1-202ENST00000562602 CAPN5O15484 640 aaPredicted RBP8.18□□□□□ -1.1
CFDP1-202ENST00000562602 EDIL3O43854 480 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 N4BP1O75113 896 aaKnown RBP8.18□□□□□ -1.1
CFDP1-202ENST00000562602 NOL4O94818 638 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 EYA4O95677 639 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 BMP1P13497 986 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 LMNB1P20700 586 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 NR2F2P24468 414 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 VARSP26640 1264 aaKnown RBP8.18□□□□□ -1.1
CFDP1-202ENST00000562602 SREBF1P36956 1147 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 MAGEA9P43362 315 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 CDR1P51861 262 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 KCNQ4P56696 695 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 ARHGAP4P98171 946 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 GFPT1Q06210 699 aaPredicted RBP8.18□□□□□ -1.1
CFDP1-202ENST00000562602 C2orf54Q08AI8 447 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 PICALMQ13492 652 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 RAPGEF1Q13905 1077 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 QPCTQ16769 361 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 KIAA0753Q2KHM9 967 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 QRICH1Q2TAL8 776 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 CERKLQ49MI3 558 aaPredicted RBP8.18□□□□□ -1.1
CFDP1-202ENST00000562602 CFAP58Q5T655 872 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 CDC42EP5Q6NZY7 148 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 NFRKBQ6P4R8 1299 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 BTNL9Q6UXG8 535 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 EPM2AIP1Q7L775 607 aaPredicted RBP8.18□□□□□ -1.1
CFDP1-202ENST00000562602 MAATS1Q7Z4T9 603 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 CROCCP2Q86T23 111 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 FBXO11Q86XK2 927 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 EFCAB13Q8IY85 973 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 NLGN1Q8N2Q7 840 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 C3orf20Q8ND61 904 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 CCDC26Q8TAB7 109 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 SCFD1Q8WVM8 642 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 TBC1D5Q92609 795 aa8.18□□□□□ -1.1
CFDP1-202ENST00000562602 LRRC1Q9BTT6 524 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms