RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 OR52Z1P0C646 297 aa17.24■□□□□ 0.35
CCNDBP1-203ENST00000562553 NPEPPSP55786 919 aa17.24■□□□□ 0.35
CCNDBP1-203ENST00000562553 TBC1D8BQ0IIM8 1120 aa17.24■□□□□ 0.35
CCNDBP1-203ENST00000562553 ORC2Q13416 577 aaPredicted RBP17.24■□□□□ 0.35
CCNDBP1-203ENST00000562553 DRP2Q13474 957 aa17.24■□□□□ 0.35
CCNDBP1-203ENST00000562553 KIZQ2M2Z5 673 aa17.24■□□□□ 0.35
CCNDBP1-203ENST00000562553 LARP1BQ659C4 914 aaKnown RBP17.24■□□□□ 0.35
CCNDBP1-203ENST00000562553 FAM117BQ6P1L5 589 aa17.24■□□□□ 0.35
CCNDBP1-203ENST00000562553 C4orf32Q8N8J7 132 aa17.24■□□□□ 0.35
CCNDBP1-203ENST00000562553 ZNF579Q8NAF0 562 aaKnown RBP17.24■□□□□ 0.35
CCNDBP1-203ENST00000562553 TMEM40Q8WWA1 233 aa17.24■□□□□ 0.35
CCNDBP1-203ENST00000562553 APBB2Q92870 758 aa17.24■□□□□ 0.35
CCNDBP1-203ENST00000562553 COL25A1Q9BXS0 654 aaPredicted RBP17.24■□□□□ 0.35
CCNDBP1-203ENST00000562553 SUGCTQ9HAC7 445 aa17.24■□□□□ 0.35
CCNDBP1-203ENST00000562553 TTC3P53804 2025 aa17.23■□□□□ 0.35
CCNDBP1-203ENST00000562553 K7ELQ4 463 aaPredicted RBP17.23■□□□□ 0.35
CCNDBP1-203ENST00000562553 ZBTB39O15060 712 aa17.23■□□□□ 0.35
CCNDBP1-203ENST00000562553 GPR32O75388 356 aa17.23■□□□□ 0.35
CCNDBP1-203ENST00000562553 SLITRK3O94933 977 aa17.23■□□□□ 0.35
CCNDBP1-203ENST00000562553 TMEM266Q2M3C6 531 aa17.23■□□□□ 0.35
CCNDBP1-203ENST00000562553 C4orf19Q8IY42 314 aa17.23■□□□□ 0.35
CCNDBP1-203ENST00000562553 MYOCDQ8IZQ8 938 aa17.23■□□□□ 0.35
CCNDBP1-203ENST00000562553 LINC01599Q8WXQ3 324 aa17.23■□□□□ 0.35
CCNDBP1-203ENST00000562553 ZNF668Q96K58 619 aaPredicted RBP17.23■□□□□ 0.35
CCNDBP1-203ENST00000562553 OSMRQ99650 979 aa17.23■□□□□ 0.35
CCNDBP1-203ENST00000562553 HSD17B14Q9BPX1 270 aa17.23■□□□□ 0.35
CCNDBP1-203ENST00000562553 AKT3Q9Y243 479 aa17.23■□□□□ 0.35
CCNDBP1-203ENST00000562553 CHD7Q9P2D1 2997 aa17.22■□□□□ 0.35
CCNDBP1-203ENST00000562553 VCANP13611 3396 aa17.22■□□□□ 0.35
CCNDBP1-203ENST00000562553 IGKV6-21A0A0C4DH24 114 aa17.22■□□□□ 0.35
CCNDBP1-203ENST00000562553 LCHNA4D1U4 455 aa17.22■□□□□ 0.35
CCNDBP1-203ENST00000562553 DKC1O60832 514 aaKnown RBP eCLIP17.22■□□□□ 0.35
CCNDBP1-203ENST00000562553 GJB5O95377 273 aa17.22■□□□□ 0.35
CCNDBP1-203ENST00000562553 AMHP03971 560 aa17.22■□□□□ 0.35
CCNDBP1-203ENST00000562553 CA3P07451 260 aa17.22■□□□□ 0.35
CCNDBP1-203ENST00000562553 YWHABP31946 246 aaKnown RBP17.22■□□□□ 0.35
CCNDBP1-203ENST00000562553 TECP42680 631 aa17.22■□□□□ 0.35
CCNDBP1-203ENST00000562553 TPH2Q8IWU9 490 aa17.22■□□□□ 0.35
CCNDBP1-203ENST00000562553 MAP7D2Q96T17 732 aa17.22■□□□□ 0.35
CCNDBP1-203ENST00000562553 ZSWIM4Q9H7M6 989 aa17.22■□□□□ 0.35
CCNDBP1-203ENST00000562553 CYP26B1Q9NR63 512 aa17.22■□□□□ 0.35
CCNDBP1-203ENST00000562553 FOXD4L1Q9NU39 408 aa17.22■□□□□ 0.35
CCNDBP1-203ENST00000562553 PADI3Q9ULW8 664 aa17.22■□□□□ 0.35
CCNDBP1-203ENST00000562553 NOC2LQ9Y3T9 749 aaKnown RBP17.22■□□□□ 0.35
CCNDBP1-203ENST00000562553 SQORQ9Y6N5 450 aa17.22■□□□□ 0.35
CCNDBP1-203ENST00000562553 TLL1O43897 1013 aa17.21■□□□□ 0.35
CCNDBP1-203ENST00000562553 TMOD1P28289 359 aa17.21■□□□□ 0.35
CCNDBP1-203ENST00000562553 NLRP11P59045 1033 aaKnown RBP17.21■□□□□ 0.35
CCNDBP1-203ENST00000562553 PAK2Q13177 524 aa17.21■□□□□ 0.35
CCNDBP1-203ENST00000562553 PTGDRQ13258 359 aa17.21■□□□□ 0.35
CCNDBP1-203ENST00000562553 PPP2R2DQ66LE6 453 aa17.21■□□□□ 0.35
CCNDBP1-203ENST00000562553 SPRED2Q7Z698 418 aa17.21■□□□□ 0.35
CCNDBP1-203ENST00000562553 USP38Q8NB14 1042 aa17.21■□□□□ 0.35
CCNDBP1-203ENST00000562553 SNX21Q969T3 373 aa17.21■□□□□ 0.35
CCNDBP1-203ENST00000562553 CEP170P1Q96L14 293 aa17.21■□□□□ 0.35
CCNDBP1-203ENST00000562553 ADAMTS10Q9H324 1103 aa17.21■□□□□ 0.35
CCNDBP1-203ENST00000562553 TMX1Q9H3N1 280 aa17.21■□□□□ 0.35
CCNDBP1-203ENST00000562553 SLC28A3Q9HAS3 691 aa17.21■□□□□ 0.35
CCNDBP1-203ENST00000562553 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.21■□□□□ 0.35
CCNDBP1-203ENST00000562553 BMP2KQ9NSY1 1161 aaPredicted RBP17.21■□□□□ 0.35
CCNDBP1-203ENST00000562553 A0A087WWV3 80 aa17.2■□□□□ 0.34
CCNDBP1-203ENST00000562553 MAFO75444 373 aaPredicted RBP17.2■□□□□ 0.34
CCNDBP1-203ENST00000562553 MED24O75448 989 aa17.2■□□□□ 0.34
CCNDBP1-203ENST00000562553 LYPLA2O95372 231 aa17.2■□□□□ 0.34
CCNDBP1-203ENST00000562553 SPATA31C1P0DKV0 1188 aa17.2■□□□□ 0.34
CCNDBP1-203ENST00000562553 GPC3P51654 580 aa17.2■□□□□ 0.34
CCNDBP1-203ENST00000562553 CRYBB1P53674 252 aaPredicted RBP17.2■□□□□ 0.34
CCNDBP1-203ENST00000562553 RTN4RL1Q86UN2 441 aaPredicted RBP17.2■□□□□ 0.34
CCNDBP1-203ENST00000562553 FAM228AQ86W67 206 aa17.2■□□□□ 0.34
CCNDBP1-203ENST00000562553 NEK9Q8TD19 979 aa17.2■□□□□ 0.34
CCNDBP1-203ENST00000562553 ZBED2Q9BTP6 218 aa17.2■□□□□ 0.34
CCNDBP1-203ENST00000562553 ERVK-5Q9HDB9 667 aa17.2■□□□□ 0.34
CCNDBP1-203ENST00000562553 VPS37CA5D8V6 355 aaPredicted RBP17.19■□□□□ 0.34
CCNDBP1-203ENST00000562553 ENPP3O14638 875 aa17.19■□□□□ 0.34
CCNDBP1-203ENST00000562553 RPS6KA5O75582 802 aa17.19■□□□□ 0.34
CCNDBP1-203ENST00000562553 UPP2O95045 317 aa17.19■□□□□ 0.34
CCNDBP1-203ENST00000562553 NFX1Q12986 1120 aaKnown RBP17.19■□□□□ 0.34
CCNDBP1-203ENST00000562553 RILPL1Q5EBL4 403 aa17.19■□□□□ 0.34
CCNDBP1-203ENST00000562553 XKR9Q5GH70 373 aa17.19■□□□□ 0.34
CCNDBP1-203ENST00000562553 CATSPER3Q86XQ3 398 aa17.19■□□□□ 0.34
CCNDBP1-203ENST00000562553 TOP1MTQ969P6 601 aa17.19■□□□□ 0.34
CCNDBP1-203ENST00000562553 INTS4Q96HW7 963 aaKnown RBP17.19■□□□□ 0.34
CCNDBP1-203ENST00000562553 PRDM12Q9H4Q4 367 aa17.19■□□□□ 0.34
CCNDBP1-203ENST00000562553 DHX33Q9H6R0 707 aaKnown RBP17.19■□□□□ 0.34
CCNDBP1-203ENST00000562553 COL4A6Q14031 1691 aa17.19■□□□□ 0.34
CCNDBP1-203ENST00000562553 COL4A4P53420 1690 aaPredicted RBP17.18■□□□□ 0.34
CCNDBP1-203ENST00000562553 MGEA5O60502 916 aa17.18■□□□□ 0.34
CCNDBP1-203ENST00000562553 FXR2P51116 673 aaKnown RBP eCLIP17.18■□□□□ 0.342e-6■□□□□ 9.9
CCNDBP1-203ENST00000562553 POLGP54098 1239 aaPredicted RBP17.18■□□□□ 0.34
CCNDBP1-203ENST00000562553 TAP1Q03518 808 aa17.18■□□□□ 0.34
CCNDBP1-203ENST00000562553 IL17AQ16552 155 aa17.18■□□□□ 0.34
CCNDBP1-203ENST00000562553 OTUD6AQ7L8S5 288 aa17.18■□□□□ 0.34
CCNDBP1-203ENST00000562553 FERMT3Q86UX7 667 aa17.18■□□□□ 0.34
CCNDBP1-203ENST00000562553 PIGOQ8TEQ8 1089 aa17.18■□□□□ 0.34
CCNDBP1-203ENST00000562553 GAS2L1Q99501 681 aaPredicted RBP17.18■□□□□ 0.34
CCNDBP1-203ENST00000562553 RAD9AQ99638 391 aa17.18■□□□□ 0.34
CCNDBP1-203ENST00000562553 CERS4Q9HA82 394 aa17.18■□□□□ 0.34
CCNDBP1-203ENST00000562553 TUFT1Q9NNX1 390 aa17.18■□□□□ 0.34
CCNDBP1-203ENST00000562553 SUCLA2Q9P2R7 463 aaPredicted RBP17.18■□□□□ 0.34
CCNDBP1-203ENST00000562553 ST3GAL5Q9UNP4 418 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms