RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 ZNF579Q8NAF0 562 aaKnown RBP18.67■□□□□ 0.58
CLK3-207ENST00000562389 SNX29Q8TEQ0 813 aa18.67■□□□□ 0.58
CLK3-207ENST00000562389 OSBPL7Q9BZF2 842 aa18.67■□□□□ 0.58
CLK3-207ENST00000562389 SUGCTQ9HAC7 445 aa18.67■□□□□ 0.58
CLK3-207ENST00000562389 AKT3Q9Y243 479 aa18.67■□□□□ 0.58
CLK3-207ENST00000562389 MORC2Q9Y6X9 1032 aaPredicted RBP18.67■□□□□ 0.58
CLK3-207ENST00000562389 GAS2O43903 313 aaKnown RBP18.66■□□□□ 0.58
CLK3-207ENST00000562389 GHRP10912 638 aa18.66■□□□□ 0.58
CLK3-207ENST00000562389 RARRES1P49788 294 aa18.66■□□□□ 0.58
CLK3-207ENST00000562389 POLGP54098 1239 aaPredicted RBP18.66■□□□□ 0.58
CLK3-207ENST00000562389 MKRN4PQ13434 485 aaPredicted RBP18.66■□□□□ 0.58
CLK3-207ENST00000562389 PKP1Q13835 747 aa18.66■□□□□ 0.58
CLK3-207ENST00000562389 LPIN1Q14693 890 aa18.66■□□□□ 0.58
CLK3-207ENST00000562389 KRT79Q5XKE5 535 aa18.66■□□□□ 0.58
CLK3-207ENST00000562389 POTEGQ6S5H5 508 aa18.66■□□□□ 0.58
CLK3-207ENST00000562389 TSHZ1Q6ZSZ6 1077 aa18.66■□□□□ 0.58
CLK3-207ENST00000562389 USP38Q8NB14 1042 aa18.66■□□□□ 0.58
CLK3-207ENST00000562389 DBF4BQ8NFT6 615 aa18.66■□□□□ 0.58
CLK3-207ENST00000562389 PIGOQ8TEQ8 1089 aa18.66■□□□□ 0.58
CLK3-207ENST00000562389 SLC7A3Q8WY07 619 aa18.66■□□□□ 0.58
CLK3-207ENST00000562389 SEPT8Q92599 483 aa18.66■□□□□ 0.58
CLK3-207ENST00000562389 APBB2Q92870 758 aa18.66■□□□□ 0.58
CLK3-207ENST00000562389 AK8Q96MA6 479 aa18.66■□□□□ 0.58
CLK3-207ENST00000562389 NACC1Q96RE7 527 aa18.66■□□□□ 0.58
CLK3-207ENST00000562389 USP28Q96RU2 1077 aa18.66■□□□□ 0.58
CLK3-207ENST00000562389 CXXC1Q9P0U4 656 aaPredicted RBP18.66■□□□□ 0.58
CLK3-207ENST00000562389 DBR1Q9UK59 544 aaKnown RBP18.66■□□□□ 0.58
CLK3-207ENST00000562389 PTPRSQ13332 1948 aa18.65■□□□□ 0.58
CLK3-207ENST00000562389 ABHD14A-ACY1A0A1B0GW23 586 aa18.65■□□□□ 0.58
CLK3-207ENST00000562389 PP2D1A8MPX8 630 aa18.65■□□□□ 0.58
CLK3-207ENST00000562389 EFCAB14O75071 495 aa18.65■□□□□ 0.58
CLK3-207ENST00000562389 GPR32O75388 356 aa18.65■□□□□ 0.58
CLK3-207ENST00000562389 VTNP04004 478 aa18.65■□□□□ 0.58
CLK3-207ENST00000562389 NASPP49321 788 aaPredicted RBP18.65■□□□□ 0.58
CLK3-207ENST00000562389 DNM2P50570 870 aa18.65■□□□□ 0.58
CLK3-207ENST00000562389 DRP2Q13474 957 aa18.65■□□□□ 0.58
CLK3-207ENST00000562389 ECM1Q16610 540 aa18.65■□□□□ 0.58
CLK3-207ENST00000562389 TCTN1Q2MV58 587 aa18.65■□□□□ 0.58
CLK3-207ENST00000562389 CCDC43Q96MW1 224 aaKnown RBP18.65■□□□□ 0.58
CLK3-207ENST00000562389 ZNF396Q96N95 335 aaPredicted RBP18.65■□□□□ 0.58
CLK3-207ENST00000562389 MMTAG2Q9BU76 263 aaKnown RBP18.65■□□□□ 0.58
CLK3-207ENST00000562389 IFIH1Q9BYX4 1025 aaKnown RBP18.65■□□□□ 0.58
CLK3-207ENST00000562389 RANBP2P49792 3224 aaKnown RBP18.65■□□□□ 0.58
CLK3-207ENST00000562389 ZBBXA8MT70 800 aa18.64■□□□□ 0.57
CLK3-207ENST00000562389 DGAT1O75907 488 aa18.64■□□□□ 0.57
CLK3-207ENST00000562389 BRD1O95696 1058 aa18.64■□□□□ 0.57
CLK3-207ENST00000562389 CDC25AP30304 524 aa18.64■□□□□ 0.57
CLK3-207ENST00000562389 LONP1P36776 959 aaKnown RBP18.64■□□□□ 0.57
CLK3-207ENST00000562389 GPC3P51654 580 aa18.64■□□□□ 0.57
CLK3-207ENST00000562389 CRYBB1P53674 252 aaPredicted RBP18.64■□□□□ 0.57
CLK3-207ENST00000562389 CDC42EP1Q00587 391 aa18.64■□□□□ 0.57
CLK3-207ENST00000562389 IKBKEQ14164 716 aa18.64■□□□□ 0.57
CLK3-207ENST00000562389 EMC2Q15006 297 aa18.64■□□□□ 0.57
CLK3-207ENST00000562389 KIZQ2M2Z5 673 aa18.64■□□□□ 0.57
CLK3-207ENST00000562389 HYIQ5T013 277 aa18.64■□□□□ 0.57
CLK3-207ENST00000562389 FOXD4L5Q5VV16 416 aaPredicted RBP18.64■□□□□ 0.57
CLK3-207ENST00000562389 FOXD4L4Q8WXT5 416 aaPredicted RBP18.64■□□□□ 0.57
CLK3-207ENST00000562389 MTRQ99707 1265 aa18.64■□□□□ 0.57
CLK3-207ENST00000562389 A0A087WWV3 80 aa18.63■□□□□ 0.57
CLK3-207ENST00000562389 SLC26A4O43511 780 aa18.63■□□□□ 0.57
CLK3-207ENST00000562389 NLRP11P59045 1033 aaKnown RBP18.63■□□□□ 0.57
CLK3-207ENST00000562389 CEBPZQ03701 1054 aaKnown RBP18.63■□□□□ 0.57
CLK3-207ENST00000562389 SLC39A14Q15043 492 aa18.63■□□□□ 0.57
CLK3-207ENST00000562389 KCTD17Q8N5Z5 321 aa18.63■□□□□ 0.57
CLK3-207ENST00000562389 TCP11Q8WWU5 503 aa18.63■□□□□ 0.57
CLK3-207ENST00000562389 PPP1R16BQ96T49 567 aa18.63■□□□□ 0.57
CLK3-207ENST00000562389 OSMRQ99650 979 aa18.63■□□□□ 0.57
CLK3-207ENST00000562389 ADAMTS10Q9H324 1103 aa18.63■□□□□ 0.57
CLK3-207ENST00000562389 AGO3Q9H9G7 860 aaKnown RBP18.63■□□□□ 0.57
CLK3-207ENST00000562389 CDHR5Q9HBB8 845 aa18.63■□□□□ 0.57
CLK3-207ENST00000562389 ATP6V0A4Q9HBG4 840 aa18.63■□□□□ 0.57
CLK3-207ENST00000562389 XPNPEP1Q9NQW7 623 aa18.63■□□□□ 0.57
CLK3-207ENST00000562389 DDX19AQ9NUU7 478 aaKnown RBP18.63■□□□□ 0.57
CLK3-207ENST00000562389 SUCLA2Q9P2R7 463 aaPredicted RBP18.63■□□□□ 0.57
CLK3-207ENST00000562389 KIAA1024Q9UPX6 916 aa18.63■□□□□ 0.57
CLK3-207ENST00000562389 GINS2Q9Y248 185 aa18.63■□□□□ 0.57
CLK3-207ENST00000562389 SLC4A7Q9Y6M7 1214 aa18.63■□□□□ 0.57
CLK3-207ENST00000562389 GBF1Q92538 1859 aa18.63■□□□□ 0.57
CLK3-207ENST00000562389 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.62■□□□□ 0.57
CLK3-207ENST00000562389 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.62■□□□□ 0.57
CLK3-207ENST00000562389 SOX1O00570 391 aaPredicted RBP18.62■□□□□ 0.57
CLK3-207ENST00000562389 CD52P31358 61 aa18.62■□□□□ 0.57
CLK3-207ENST00000562389 WDR5P61964 334 aaKnown RBP18.62■□□□□ 0.57
CLK3-207ENST00000562389 SMAD3P84022 425 aaKnown RBP18.62■□□□□ 0.57
CLK3-207ENST00000562389 GRIN1Q05586 938 aa18.62■□□□□ 0.57
CLK3-207ENST00000562389 FAM43BQ6ZT52 329 aaPredicted RBP18.62■□□□□ 0.57
CLK3-207ENST00000562389 TMEM40Q8WWA1 233 aa18.62■□□□□ 0.57
CLK3-207ENST00000562389 PSPC1Q8WXF1 523 aaKnown RBP18.62■□□□□ 0.57
CLK3-207ENST00000562389 SLC9A7Q96T83 725 aa18.62■□□□□ 0.57
CLK3-207ENST00000562389 NT5C3AQ9H0P0 336 aa18.62■□□□□ 0.57
CLK3-207ENST00000562389 BMP2KQ9NSY1 1161 aaPredicted RBP18.62■□□□□ 0.57
CLK3-207ENST00000562389 FBXO2Q9UK22 296 aaPredicted RBP18.62■□□□□ 0.57
CLK3-207ENST00000562389 SRPRBQ9Y5M8 271 aaKnown RBP18.62■□□□□ 0.57
CLK3-207ENST00000562389 RBAK-RBAKDNI3L0D1 243 aa18.61■□□□□ 0.57
CLK3-207ENST00000562389 USO1O60763 962 aaKnown RBP18.61■□□□□ 0.57
CLK3-207ENST00000562389 MARCKSP29966 332 aaPredicted RBP18.61■□□□□ 0.57
CLK3-207ENST00000562389 KCNJ6P48051 423 aa18.61■□□□□ 0.57
CLK3-207ENST00000562389 FXR1P51114 621 aaKnown RBP eCLIP18.61■□□□□ 0.57
CLK3-207ENST00000562389 PAK2Q13177 524 aa18.61■□□□□ 0.57
CLK3-207ENST00000562389 ODR4Q5SWX8 454 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 763.9 ms