RNA–Protein interactions for RNA: ENST00000562303.5

RPAP1-204, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 5,897 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-204ENST00000562303 ADAM22Q9P0K1 906 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 IPO5O00410 1097 aaKnown RBP12.04□□□□□ -0.48
RPAP1-204ENST00000562303 CREB3O43889 395 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 IFNAR1P17181 557 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 PRELPP51888 382 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 ACAP3Q96P50 834 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 MMP19Q99542 508 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 ZNF302Q9NR11 478 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 PCDHB6Q9Y5E3 794 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 PALLDQ8WX93 1383 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 RNF123Q5XPI4 1314 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 HOXA7P31268 230 aaPredicted RBP12.04□□□□□ -0.48
RPAP1-204ENST00000562303 RASGRF1Q13972 1273 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 PAGE5Q96GU1 130 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 TDRD3Q9H7E2 651 aaKnown RBP12.04□□□□□ -0.48
RPAP1-204ENST00000562303 RNF14Q9UBS8 474 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 KIAA0556O60303 1618 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 ECE2O60344 883 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 LRRC63Q05C16 580 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 LBRQ14739 615 aaKnown RBP12.04□□□□□ -0.48
RPAP1-204ENST00000562303 FAM133BQ5BKY9 247 aaKnown RBP12.04□□□□□ -0.48
RPAP1-204ENST00000562303 RHPN2Q8IUC4 686 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 NEK9Q8TD19 979 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 TEKT4Q8WW24 435 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 TRAIPQ9BWF2 469 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 STAP2Q9UGK3 403 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 SRPRBQ9Y5M8 271 aaKnown RBP12.04□□□□□ -0.48
RPAP1-204ENST00000562303 ABCB11O95342 1321 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 E5RI56 91 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 CDC25BP30305 580 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 TAF11Q15544 211 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 PASD1Q8IV76 773 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 TMEM35BQ8NCS4 154 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 NSUN6Q8TEA1 469 aaKnown RBP12.04□□□□□ -0.48
RPAP1-204ENST00000562303 FBXO41Q8TF61 875 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 TRIM45Q9H8W5 580 aaPredicted RBP12.04□□□□□ -0.48
RPAP1-204ENST00000562303 KIAA1586Q9HCI6 787 aa12.04□□□□□ -0.48
RPAP1-204ENST00000562303 SAMSN1Q9NSI8 373 aaKnown RBP12.04□□□□□ -0.48
RPAP1-204ENST00000562303 PIP4K2CQ8TBX8 421 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 TEX12Q9BXU0 123 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 MAGEB5Q9BZ81 275 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 COG4Q9H9E3 785 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 DYRK4Q9NR20 520 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 HEY1Q9Y5J3 304 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 OCM2P0CE71 109 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 OCMP0CE72 109 aaPredicted RBP12.03□□□□□ -0.48
RPAP1-204ENST00000562303 CPB1P15086 417 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 CA4P22748 312 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 PKP1Q13835 747 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 PIGBQ92521 554 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 TRIM4Q9C037 500 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 RHOT2Q8IXI1 618 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 RNF168Q8IYW5 571 aaPredicted RBP12.03□□□□□ -0.48
RPAP1-204ENST00000562303 ZMYND12Q9H0C1 365 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 TXLNGQ9NUQ3 528 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 SOWAHDA6NJG2 315 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 KRT37O76014 449 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 ESRRAP11474 423 aaPredicted RBP12.03□□□□□ -0.48
RPAP1-204ENST00000562303 GPT2Q8TD30 523 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 FAM213AQ9BRX8 229 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 EIF2AQ9BY44 585 aaKnown RBP12.03□□□□□ -0.48
RPAP1-204ENST00000562303 SP110Q9HB58 689 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 TBC1D22BQ9NU19 505 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 DNAJC12Q9UKB3 198 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 STRIP2Q9ULQ0 834 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 ZBTB7AO95365 584 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 MOCS2O96007 188 aaPredicted RBP12.03□□□□□ -0.48
RPAP1-204ENST00000562303 TMEM259Q4ZIN3 620 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 CC2D1AQ6P1N0 951 aaPredicted RBP12.03□□□□□ -0.48
RPAP1-204ENST00000562303 PADI6Q6TGC4 694 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 CRLF3Q8IUI8 442 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 APOBEC3FQ8IUX4 373 aaKnown RBP12.03□□□□□ -0.48
RPAP1-204ENST00000562303 LINC00301Q8NCQ3 95 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 PBXIP1Q96AQ6 731 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 KLHL29Q96CT2 875 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 OTUD5Q96G74 571 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 CNOT10Q9H9A5 744 aaKnown RBP12.03□□□□□ -0.48
RPAP1-204ENST00000562303 SAYSD1Q9NPB0 183 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 RNF146Q9NTX7 359 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 GTSE1Q9NYZ3 720 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 AFF4Q9UHB7 1163 aaKnown RBP12.03□□□□□ -0.48
RPAP1-204ENST00000562303 L3MBTL1Q9Y468 752 aa12.03□□□□□ -0.48
RPAP1-204ENST00000562303 TCOF1Q13428 1488 aaKnown RBP12.02□□□□□ -0.48
RPAP1-204ENST00000562303 UBE4BO95155 1302 aa12.02□□□□□ -0.48
RPAP1-204ENST00000562303 ZBTB5O15062 677 aa12.02□□□□□ -0.48
RPAP1-204ENST00000562303 E2F6O75461 281 aa12.02□□□□□ -0.48
RPAP1-204ENST00000562303 PLEKHA8P1O95397 391 aa12.02□□□□□ -0.48
RPAP1-204ENST00000562303 TFDP2Q14188 446 aa12.02□□□□□ -0.48
RPAP1-204ENST00000562303 ALKBH5Q6P6C2 394 aaKnown RBP12.02□□□□□ -0.48
RPAP1-204ENST00000562303 C11orf57Q6ZUT1 292 aaPredicted RBP12.02□□□□□ -0.48
RPAP1-204ENST00000562303 FMO2Q99518 471 aa12.02□□□□□ -0.48
RPAP1-204ENST00000562303 SPON2Q9BUD6 331 aa12.02□□□□□ -0.48
RPAP1-204ENST00000562303 SYNDIG1Q9H7V2 258 aa12.02□□□□□ -0.48
RPAP1-204ENST00000562303 ANAPC7Q9UJX3 599 aa12.02□□□□□ -0.48
RPAP1-204ENST00000562303 NOVA2Q9UNW9 492 aaKnown RBP12.02□□□□□ -0.48
RPAP1-204ENST00000562303 HEG1Q9ULI3 1381 aa12.02□□□□□ -0.48
RPAP1-204ENST00000562303 USP17L10C9JJH3 530 aa12.02□□□□□ -0.49
RPAP1-204ENST00000562303 M0QYV0 167 aa12.02□□□□□ -0.49
RPAP1-204ENST00000562303 SEC31AO94979 1220 aaKnown RBP12.02□□□□□ -0.49
RPAP1-204ENST00000562303 EEF1DP29692 281 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms