RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 KCNH7Q9NS40 1196 aa8.5□□□□□ -1.05
SMG1-204ENST00000561940 TOMM22Q9NS69 142 aa8.5□□□□□ -1.05
SMG1-204ENST00000561940 KCND1Q9NSA2 647 aa8.5□□□□□ -1.05
SMG1-204ENST00000561940 CHPF2Q9P2E5 772 aa8.5□□□□□ -1.05
SMG1-204ENST00000561940 SPO11Q9Y5K1 396 aa8.5□□□□□ -1.05
SMG1-204ENST00000561940 B3GALT1Q9Y5Z6 326 aa8.5□□□□□ -1.05
SMG1-204ENST00000561940 EID1Q9Y6B2 187 aa8.5□□□□□ -1.05
SMG1-204ENST00000561940 HIP1RO75146 1068 aa8.49□□□□□ -1.05
SMG1-204ENST00000561940 PTGS1P23219 599 aa8.49□□□□□ -1.05
SMG1-204ENST00000561940 ERVK-21P61565 698 aa8.49□□□□□ -1.05
SMG1-204ENST00000561940 MCL1Q07820 350 aa8.49□□□□□ -1.05
SMG1-204ENST00000561940 KIAA2012Q0VF49 1180 aa8.49□□□□□ -1.05
SMG1-204ENST00000561940 ZNF174Q15697 407 aa8.49□□□□□ -1.05
SMG1-204ENST00000561940 SYDE2Q5VT97 1194 aa8.49□□□□□ -1.05
SMG1-204ENST00000561940 CMIPQ8IY22 773 aa8.49□□□□□ -1.05
SMG1-204ENST00000561940 CBARPQ8N350 705 aaPredicted RBP8.49□□□□□ -1.05
SMG1-204ENST00000561940 DLG3Q92796 817 aa8.49□□□□□ -1.05
SMG1-204ENST00000561940 RELTQ969Z4 430 aa8.49□□□□□ -1.05
SMG1-204ENST00000561940 GBP4Q96PP9 640 aa8.49□□□□□ -1.05
SMG1-204ENST00000561940 KRTAP4-9Q9BYQ8 210 aa8.49□□□□□ -1.05
SMG1-204ENST00000561940 BTBD7Q9P203 1132 aa8.49□□□□□ -1.05
SMG1-204ENST00000561940 PRAMEF22A3QJZ6 481 aa8.48□□□□□ -1.05
SMG1-204ENST00000561940 RASSF10A6NK89 507 aa8.48□□□□□ -1.05
SMG1-204ENST00000561940 FOXP2O15409 715 aa8.48□□□□□ -1.05
SMG1-204ENST00000561940 ULK1O75385 1050 aa8.48□□□□□ -1.05
SMG1-204ENST00000561940 KNG1P01042 644 aa8.48□□□□□ -1.05
SMG1-204ENST00000561940 AOAHP28039 575 aa8.48□□□□□ -1.05
SMG1-204ENST00000561940 IARSP41252 1262 aaKnown RBP8.48□□□□□ -1.05
SMG1-204ENST00000561940 NEK2P51955 445 aa8.48□□□□□ -1.05
SMG1-204ENST00000561940 SMAD3P84022 425 aaKnown RBP8.48□□□□□ -1.05
SMG1-204ENST00000561940 ABCB5Q2M3G0 1257 aa8.48□□□□□ -1.05
SMG1-204ENST00000561940 ESRP1Q6NXG1 681 aaKnown RBP8.48□□□□□ -1.05
SMG1-204ENST00000561940 LRSAM1Q6UWE0 723 aa8.48□□□□□ -1.05
SMG1-204ENST00000561940 FAM124AQ86V42 546 aa8.48□□□□□ -1.05
SMG1-204ENST00000561940 HIPK4Q8NE63 616 aa8.48□□□□□ -1.05
SMG1-204ENST00000561940 ASB15Q8WXK1 588 aa8.48□□□□□ -1.05
SMG1-204ENST00000561940 ZMAT4Q9H898 229 aa8.48□□□□□ -1.05
SMG1-204ENST00000561940 INCENPQ9NQS7 918 aa8.48□□□□□ -1.05
SMG1-204ENST00000561940 RTEL1Q9NZ71 1219 aa8.48□□□□□ -1.05
SMG1-204ENST00000561940 RAPGEFL1Q9UHV5 662 aa8.48□□□□□ -1.05
SMG1-204ENST00000561940 TNKSO95271 1327 aa8.48□□□□□ -1.05
SMG1-204ENST00000561940 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.47□□□□□ -1.05
SMG1-204ENST00000561940 KLHL18O94889 574 aa8.47□□□□□ -1.05
SMG1-204ENST00000561940 TERF2Q15554 542 aa8.47□□□□□ -1.05
SMG1-204ENST00000561940 FMNL3Q8IVF7 1028 aa8.47□□□□□ -1.05
SMG1-204ENST00000561940 TEPSINQ96N21 525 aa8.47□□□□□ -1.05
SMG1-204ENST00000561940 GALNT8Q9NY28 637 aa8.47□□□□□ -1.05
SMG1-204ENST00000561940 INVSQ9Y283 1065 aa8.47□□□□□ -1.05
SMG1-204ENST00000561940 H0Y858 1186 aa8.46□□□□□ -1.06
SMG1-204ENST00000561940 FOXD2O60548 495 aaPredicted RBP8.46□□□□□ -1.06
SMG1-204ENST00000561940 SESN3P58005 492 aa8.46□□□□□ -1.06
SMG1-204ENST00000561940 HERVK_113P62684 666 aa8.46□□□□□ -1.06
SMG1-204ENST00000561940 NFATC3Q12968 1075 aa8.46□□□□□ -1.06
SMG1-204ENST00000561940 CATSPEREQ5SY80 951 aa8.46□□□□□ -1.06
SMG1-204ENST00000561940 AHCYL2Q96HN2 611 aaKnown RBP8.46□□□□□ -1.06
SMG1-204ENST00000561940 AMNQ9BXJ7 453 aa8.46□□□□□ -1.06
SMG1-204ENST00000561940 TOPORSQ9NS56 1045 aaPredicted RBP8.46□□□□□ -1.06
SMG1-204ENST00000561940 C14orf119Q9NWQ9 140 aa8.46□□□□□ -1.06
SMG1-204ENST00000561940 B4GALT4O60513 344 aa8.45□□□□□ -1.06
SMG1-204ENST00000561940 MPIG6BO95866 241 aa8.45□□□□□ -1.06
SMG1-204ENST00000561940 MT-CO1P00395 513 aa8.45□□□□□ -1.06
SMG1-204ENST00000561940 ADCY8P40145 1251 aa8.45□□□□□ -1.06
SMG1-204ENST00000561940 LRRC41Q15345 812 aa8.45□□□□□ -1.06
SMG1-204ENST00000561940 WDR72Q3MJ13 1102 aa8.45□□□□□ -1.06
SMG1-204ENST00000561940 CC2D1AQ6P1N0 951 aaPredicted RBP8.45□□□□□ -1.06
SMG1-204ENST00000561940 GPR155Q7Z3F1 870 aa8.45□□□□□ -1.06
SMG1-204ENST00000561940 TSR2Q969E8 191 aaKnown RBP8.45□□□□□ -1.06
SMG1-204ENST00000561940 MBD6Q96DN6 1003 aa8.45□□□□□ -1.06
SMG1-204ENST00000561940 BDH2Q9BUT1 245 aa8.45□□□□□ -1.06
SMG1-204ENST00000561940 BARX1Q9HBU1 254 aaPredicted RBP8.45□□□□□ -1.06
SMG1-204ENST00000561940 SHTN1A0MZ66 631 aa8.44□□□□□ -1.06
SMG1-204ENST00000561940 C9orf118A6NHY6 69 aa8.44□□□□□ -1.06
SMG1-204ENST00000561940 KRTAP9-7A8MTY7 169 aa8.44□□□□□ -1.06
SMG1-204ENST00000561940 K7ESF4 209 aa8.44□□□□□ -1.06
SMG1-204ENST00000561940 B4GALT3O60512 393 aa8.44□□□□□ -1.06
SMG1-204ENST00000561940 RAB27AP51159 221 aa8.44□□□□□ -1.06
SMG1-204ENST00000561940 EPHB1P54762 984 aa8.44□□□□□ -1.06
SMG1-204ENST00000561940 PHC1P78364 1004 aa8.44□□□□□ -1.06
SMG1-204ENST00000561940 IL13RA1P78552 427 aa8.44□□□□□ -1.06
SMG1-204ENST00000561940 BORAQ6PGQ7 559 aa8.44□□□□□ -1.06
SMG1-204ENST00000561940 DPP8Q6V1X1 898 aaPredicted RBP8.44□□□□□ -1.06
SMG1-204ENST00000561940 PASD1Q8IV76 773 aa8.44□□□□□ -1.06
SMG1-204ENST00000561940 KBTBD2Q8IY47 623 aa8.44□□□□□ -1.06
SMG1-204ENST00000561940 LGI4Q8N135 537 aa8.44□□□□□ -1.06
SMG1-204ENST00000561940 WDR48Q8TAF3 677 aa8.44□□□□□ -1.06
SMG1-204ENST00000561940 MYBL2P10244 700 aa8.43□□□□□ -1.06
SMG1-204ENST00000561940 ECE1P42892 770 aa8.43□□□□□ -1.06
SMG1-204ENST00000561940 PTPN21Q16825 1174 aa8.43□□□□□ -1.06
SMG1-204ENST00000561940 INAVAQ3KP66 663 aa8.43□□□□□ -1.06
SMG1-204ENST00000561940 Q6ZUG5 572 aa8.43□□□□□ -1.06
SMG1-204ENST00000561940 ZBTB46Q86UZ6 589 aa8.43□□□□□ -1.06
SMG1-204ENST00000561940 KLHL36Q8N4N3 616 aa8.43□□□□□ -1.06
SMG1-204ENST00000561940 RTF1Q92541 710 aaKnown RBP8.43□□□□□ -1.06
SMG1-204ENST00000561940 HOOK2Q96ED9 719 aa8.43□□□□□ -1.06
SMG1-204ENST00000561940 KRTAP4-2Q9BYR5 136 aa8.43□□□□□ -1.06
SMG1-204ENST00000561940 ACSS2Q9NR19 701 aa8.43□□□□□ -1.06
SMG1-204ENST00000561940 CDC42EP3Q9UKI2 254 aa8.43□□□□□ -1.06
SMG1-204ENST00000561940 PTPN22Q9Y2R2 807 aa8.43□□□□□ -1.06
SMG1-204ENST00000561940 ZNF536O15090 1300 aa8.43□□□□□ -1.06
SMG1-204ENST00000561940 GOLGA6L22H0YM25 854 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms