RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 FOXP1Q9H334 677 aaPredicted RBP7.88□□□□□ -1.15
CDH1-203ENST00000561751 SLITRK6Q9H5Y7 841 aa7.88□□□□□ -1.15
CDH1-203ENST00000561751 TLE6Q9H808 572 aa7.88□□□□□ -1.15
CDH1-203ENST00000561751 NHEJ1Q9H9Q4 299 aaPredicted RBP7.88□□□□□ -1.15
CDH1-203ENST00000561751 PREBQ9HCU5 417 aa7.88□□□□□ -1.15
CDH1-203ENST00000561751 TIMMDC1Q9NPL8 285 aa7.88□□□□□ -1.15
CDH1-203ENST00000561751 DNAJB4Q9UDY4 337 aa7.88□□□□□ -1.15
CDH1-203ENST00000561751 STK17AQ9UEE5 414 aa7.88□□□□□ -1.15
CDH1-203ENST00000561751 FBXO2Q9UK22 296 aaPredicted RBP7.88□□□□□ -1.15
CDH1-203ENST00000561751 PLAGL2Q9UPG8 496 aa7.88□□□□□ -1.15
CDH1-203ENST00000561751 USP20Q9Y2K6 914 aa7.88□□□□□ -1.15
CDH1-203ENST00000561751 ABCB11O95342 1321 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 SSU72P8A0A1W2PR75 194 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 TTC26A0AVF1 554 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 SOBPA7XYQ1 873 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 TMEM110-MUSTN1A8MSY1 372 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 PHF20L1A8MW92 1017 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 KCNJ18B7U540 433 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 RBAK-RBAKDNI3L0D1 243 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 CPLX1O14810 134 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 PFDN1O60925 122 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 TJP3O95049 919 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 UNC5CO95185 931 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 PABPC4LP0CB38 370 aaKnown RBP7.87□□□□□ -1.15
CDH1-203ENST00000561751 IBSPP21815 317 aaPredicted RBP7.87□□□□□ -1.15
CDH1-203ENST00000561751 LORP23490 312 aaPredicted RBP7.87□□□□□ -1.15
CDH1-203ENST00000561751 EIF4BP23588 611 aaKnown RBP7.87□□□□□ -1.15
CDH1-203ENST00000561751 MARCKSP29966 332 aaPredicted RBP7.87□□□□□ -1.15
CDH1-203ENST00000561751 GMPRP36959 345 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 RCAN1P53805 252 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 GUCY2DQ02846 1103 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 KCNJ12Q14500 433 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 TNFAIP8L3Q5GJ75 292 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 C10orf76Q5T2E6 689 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 DNAJC14Q6Y2X3 702 aaPredicted RBP7.87□□□□□ -1.15
CDH1-203ENST00000561751 TAOK1Q7L7X3 1001 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 TMEM110Q86TL2 294 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 SYCP3Q8IZU3 236 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 NME8Q8N427 588 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 KBTBD3Q8NAB2 608 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 DDX54Q8TDD1 881 aaKnown RBP7.87□□□□□ -1.15
CDH1-203ENST00000561751 ACTRT1Q8TDG2 376 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 SCFD2Q8WU76 684 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 WDR60Q8WVS4 1066 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 SYN2Q92777 582 aaPredicted RBP7.87□□□□□ -1.15
CDH1-203ENST00000561751 EAF2Q96CJ1 260 aaPredicted RBP7.87□□□□□ -1.15
CDH1-203ENST00000561751 CCDC42Q96M95 316 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 NOX5Q96PH1 765 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 ERGIC2Q96RQ1 377 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 CGREF1Q99674 301 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 MTA3Q9BTC8 594 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 ROPN1BQ9BZX4 212 aaPredicted RBP7.87□□□□□ -1.15
CDH1-203ENST00000561751 LACRTQ9GZZ8 138 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 ZFAND3Q9H8U3 227 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 ROPN1Q9HAT0 212 aaPredicted RBP7.87□□□□□ -1.15
CDH1-203ENST00000561751 TMOD4Q9NZQ9 345 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 DLGAP2Q9P1A6 1054 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 PRKAG3Q9UGI9 489 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 SERTAD1Q9UHV2 236 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 NOVA2Q9UNW9 492 aaKnown RBP7.87□□□□□ -1.15
CDH1-203ENST00000561751 TAF6LQ9Y6J9 622 aa7.87□□□□□ -1.15
CDH1-203ENST00000561751 USP6P35125 1406 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 NID2Q14112 1375 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 SIGLEC16A6NMB1 481 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 KIF28PB7ZC32 967 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 H3BM21 787 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 ZNF185O15231 689 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 NVLO15381 856 aaKnown RBP7.86□□□□□ -1.15
CDH1-203ENST00000561751 POLR2DO15514 142 aaKnown RBP7.86□□□□□ -1.15
CDH1-203ENST00000561751 PEX11AO75192 247 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 UBOX5O94941 541 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 MBD4O95243 580 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 ASLP04424 464 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 KRT16P08779 473 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 FAM153BP0C7A2 387 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 VDRP11473 427 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 HPDP32754 393 aaPredicted RBP7.86□□□□□ -1.15
CDH1-203ENST00000561751 CACNA2D1P54289 1103 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 RAD23BP54727 409 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 MAGOHP61326 146 aaKnown RBP7.86□□□□□ -1.15
CDH1-203ENST00000561751 KCNJ2P63252 427 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 PDE1BQ01064 536 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 UBXN1Q04323 297 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 PAK1Q13153 545 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 CBX3Q13185 183 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 BTG3Q14201 252 aaPredicted RBP7.86□□□□□ -1.15
CDH1-203ENST00000561751 EIF4A2Q14240 407 aaKnown RBP7.86□□□□□ -1.15
CDH1-203ENST00000561751 SAFBQ15424 915 aaKnown RBP eCLIP7.86□□□□□ -1.15
CDH1-203ENST00000561751 EZH2Q15910 746 aaKnown RBP7.86□□□□□ -1.15
CDH1-203ENST00000561751 FAM153CQ494X1 144 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 AKNAD1Q5T1N1 836 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 ZNF658Q5TYW1 1059 aaPredicted RBP7.86□□□□□ -1.15
CDH1-203ENST00000561751 KRT40Q6A162 431 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 SULT6B1Q6IMI4 303 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 FOXR2Q6PJQ5 311 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 STOX1Q6ZVD7 989 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 MCM10Q7L590 875 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 NME9Q86XW9 330 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 NOSTRINQ8IVI9 506 aa7.86□□□□□ -1.15
CDH1-203ENST00000561751 NELFCDQ8IXH7 590 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms