RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 ADSSL1Q8N142 457 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 ANKRD35Q8N283 1001 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 NEK9Q8TD19 979 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 DDX12PQ92771 950 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 GPRASP2Q96D09 838 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 DNAJC19Q96DA6 116 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 MRFAP1L1Q96HT8 127 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 DYDC2Q96IM9 177 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 IWS1Q96ST2 819 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 PBX4Q9BYU1 374 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 TBC1D22BQ9NU19 505 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 RGL1Q9NZL6 768 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 PKD2L1Q9P0L9 805 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 RWDD2AQ9UIY3 292 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 DNM3Q9UQ16 869 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 CTNND2Q9UQB3 1225 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 GDAQ9Y2T3 454 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 NFE2L3Q9Y4A8 694 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 IVNS1ABPQ9Y6Y0 642 aa8.36□□□□□ -1.07
TPM1-231ENST00000561395 GRXCR1A8MXD5 290 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 DDX39AO00148 427 aaKnown RBP8.35□□□□□ -1.07
TPM1-231ENST00000561395 MAFGO15525 162 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 PQBP1O60828 265 aaKnown RBP8.35□□□□□ -1.07
TPM1-231ENST00000561395 GABBR2O75899 941 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 RGS20O76081 388 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 SLITRK3O94933 977 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 EYA4O95677 639 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 SSBP05455 408 aaKnown RBP eCLIP8.35□□□□□ -1.07
TPM1-231ENST00000561395 HOXC6P09630 235 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 ATP1A3P13637 1013 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 ZNF18P17022 549 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 CYP11B2P19099 503 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 EDNRBP24530 442 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 TIE1P35590 1138 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 PPP1R2P41236 205 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 PRCPP42785 496 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 ALDH5A1P51649 535 aaPredicted RBP8.35□□□□□ -1.07
TPM1-231ENST00000561395 KCNQ1P51787 676 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 PSMC6P62333 389 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 FANCCQ00597 558 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 EHHADHQ08426 723 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 PDE4DQ08499 809 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 PAK1Q13153 545 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 STIM1Q13586 685 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 LRRC41Q15345 812 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 ARSHQ5FYA8 562 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 SPATA1Q5VX52 437 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 DYMQ7RTS9 669 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 MIER3Q7Z3K6 550 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 FAM133AQ8N9E0 248 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 SYT2Q8N9I0 419 aaPredicted RBP8.35□□□□□ -1.07
TPM1-231ENST00000561395 SHCBP1Q8NEM2 672 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 NELFBQ8WX92 580 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 TRIM44Q96DX7 344 aaPredicted RBP8.35□□□□□ -1.07
TPM1-231ENST00000561395 CDHR1Q96JP9 859 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.35□□□□□ -1.071e-6■□□□□ 10.6
TPM1-231ENST00000561395 LXNQ9BS40 222 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 FANCLQ9NW38 375 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 ARID2Q68CP9 1835 aa8.35□□□□□ -1.07
TPM1-231ENST00000561395 NFASCO94856 1347 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 FRMD3A2A2Y4 597 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 SOWAHBA6NEL2 793 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 FAM86C2PA6NEL3 165 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 SPATA31C2B4DYI2 1134 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 SEPT4O43236 478 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 IGHA2P01877 340 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 FCER1AP12319 257 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 KCNA2P16389 499 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 JAK3P52333 1124 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 STX17P56962 302 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 KRT76Q01546 638 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 STK4Q13043 487 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 COASYQ13057 564 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 PSMD2Q13200 908 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 CTTNQ14247 550 aaKnown RBP8.34□□□□□ -1.07
TPM1-231ENST00000561395 STXBP2Q15833 593 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 AAK1Q2M2I8 961 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 GNPTABQ3T906 1256 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 CDKAL1Q5VV42 579 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 ZNF746Q6NUN9 644 aaPredicted RBP8.34□□□□□ -1.07
TPM1-231ENST00000561395 TPH2Q8IWU9 490 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 CCDC65Q8IXS2 484 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 MICALL1Q8N3F8 863 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 KIAA0895Q8NCT3 520 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 RDM1Q8NG50 284 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 DHTKD1Q96HY7 919 aaPredicted RBP8.34□□□□□ -1.07
TPM1-231ENST00000561395 MMP19Q99542 508 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 SENP7Q9BQF6 1050 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 MROH8Q9H579 483 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 C11orf16Q9NQ32 467 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 IFNKQ9P0W0 207 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 WRAP73Q9P2S5 460 aaPredicted RBP8.34□□□□□ -1.07
TPM1-231ENST00000561395 ADD3Q9UEY8 706 aaKnown RBP8.34□□□□□ -1.07
TPM1-231ENST00000561395 TCEAL9Q9UHQ7 104 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 WDFY4Q6ZS81 3184 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 SCN5AQ14524 2016 aa8.34□□□□□ -1.07
TPM1-231ENST00000561395 DNAJC25-GNG10A0A024R161 153 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 NPHP3-ACAD11A0A0J9YXS1 232 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 GOLGA6L6A8MZA4 724 aa8.33□□□□□ -1.08
TPM1-231ENST00000561395 WDR64B1ANS9 1081 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms