RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 BMP2KQ9NSY1 1161 aaPredicted RBP22.29■■□□□ 1.16
TSPAN3-210ENST00000561277 MSRAQ9UJ68 235 aa22.29■■□□□ 1.16
TSPAN3-210ENST00000561277 MICAL3Q7RTP6 2002 aa22.28■■□□□ 1.16
TSPAN3-210ENST00000561277 PTPRSQ13332 1948 aa22.28■■□□□ 1.16
TSPAN3-210ENST00000561277 HSP90AA1P07900 732 aaKnown RBP22.28■■□□□ 1.16
TSPAN3-210ENST00000561277 MYOGP15173 224 aa22.28■■□□□ 1.16
TSPAN3-210ENST00000561277 DRP2Q13474 957 aa22.28■■□□□ 1.16
TSPAN3-210ENST00000561277 RAB30Q15771 203 aa22.28■■□□□ 1.16
TSPAN3-210ENST00000561277 OTUD6AQ7L8S5 288 aa22.28■■□□□ 1.16
TSPAN3-210ENST00000561277 HERC6Q8IVU3 1022 aa22.28■■□□□ 1.16
TSPAN3-210ENST00000561277 MYOCDQ8IZQ8 938 aa22.28■■□□□ 1.16
TSPAN3-210ENST00000561277 PHOSPHO2Q8TCD6 241 aa22.28■■□□□ 1.16
TSPAN3-210ENST00000561277 OSMRQ99650 979 aa22.28■■□□□ 1.16
TSPAN3-210ENST00000561277 YBX2Q9Y2T7 364 aaKnown RBP22.28■■□□□ 1.16
TSPAN3-210ENST00000561277 LOXHD1Q8IVV2 1947 aa22.27■■□□□ 1.16
TSPAN3-210ENST00000561277 POLGP54098 1239 aaPredicted RBP22.27■■□□□ 1.16
TSPAN3-210ENST00000561277 PAK2Q13177 524 aa22.27■■□□□ 1.16
TSPAN3-210ENST00000561277 XKR9Q5GH70 373 aa22.27■■□□□ 1.16
TSPAN3-210ENST00000561277 FAM117BQ6P1L5 589 aa22.27■■□□□ 1.16
TSPAN3-210ENST00000561277 TMEM40Q8WWA1 233 aa22.27■■□□□ 1.16
TSPAN3-210ENST00000561277 SLC7A3Q8WY07 619 aa22.27■■□□□ 1.16
TSPAN3-210ENST00000561277 SCLT1Q96NL6 688 aa22.27■■□□□ 1.16
TSPAN3-210ENST00000561277 AMHP03971 560 aa22.26■■□□□ 1.15
TSPAN3-210ENST00000561277 FXR2P51116 673 aaKnown RBP eCLIP22.26■■□□□ 1.15
TSPAN3-210ENST00000561277 NLRP11P59045 1033 aaKnown RBP22.26■■□□□ 1.15
TSPAN3-210ENST00000561277 MKRN4PQ13434 485 aaPredicted RBP22.26■■□□□ 1.15
TSPAN3-210ENST00000561277 BRAPQ7Z569 592 aa22.26■■□□□ 1.15
TSPAN3-210ENST00000561277 USP38Q8NB14 1042 aa22.26■■□□□ 1.15
TSPAN3-210ENST00000561277 ERMNQ8TAM6 284 aa22.26■■□□□ 1.15
TSPAN3-210ENST00000561277 CCDC43Q96MW1 224 aaKnown RBP22.26■■□□□ 1.15
TSPAN3-210ENST00000561277 NKX2-4Q9H2Z4 354 aa22.26■■□□□ 1.15
TSPAN3-210ENST00000561277 TTYH1Q9H313 450 aaPredicted RBP22.26■■□□□ 1.15
TSPAN3-210ENST00000561277 A0A087WWV3 80 aa22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 LAD1O00515 517 aa22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 GPR32O75388 356 aa22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 MAFO75444 373 aaPredicted RBP22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 MED24O75448 989 aa22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 CRYBB1P53674 252 aaPredicted RBP22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 CATSPER3Q86XQ3 398 aa22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 PIGOQ8TEQ8 1089 aa22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 JPH2Q9BR39 696 aaPredicted RBP22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 ZBED2Q9BTP6 218 aa22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 PADI3Q9ULW8 664 aa22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 NOC2LQ9Y3T9 749 aaKnown RBP22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 PCDHA11Q9Y5I1 949 aa22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 SQORQ9Y6N5 450 aa22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 ARID2Q68CP9 1835 aa22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 IGKV6-21A0A0C4DH24 114 aa22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 TLL1O43897 1013 aa22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 RPS6KA5O75582 802 aa22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 LYPLA2O95372 231 aa22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 SPATA31C1P0DKV0 1188 aa22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 DNM2P50570 870 aa22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 NFX1Q12986 1120 aaKnown RBP22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 NLRP7Q8WX94 980 aa22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 RAB34Q9BZG1 259 aa22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 TUFT1Q9NNX1 390 aa22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 LRWD1Q9UFC0 647 aa22.25■■□□□ 1.15
TSPAN3-210ENST00000561277 RFC5P40937 340 aa22.24■■□□□ 1.15
TSPAN3-210ENST00000561277 GPC3P51654 580 aa22.24■■□□□ 1.15
TSPAN3-210ENST00000561277 ATP2C1P98194 919 aaPredicted RBP22.24■■□□□ 1.15
TSPAN3-210ENST00000561277 HAUS3Q68CZ6 603 aa22.24■■□□□ 1.15
TSPAN3-210ENST00000561277 POTEGQ6S5H5 508 aa22.24■■□□□ 1.15
TSPAN3-210ENST00000561277 DTHD1Q6ZMT9 781 aa22.24■■□□□ 1.15
TSPAN3-210ENST00000561277 SPRYD3Q8NCJ5 442 aa22.24■■□□□ 1.15
TSPAN3-210ENST00000561277 ADAMTS10Q9H324 1103 aa22.24■■□□□ 1.15
TSPAN3-210ENST00000561277 SLC28A3Q9HAS3 691 aa22.24■■□□□ 1.15
TSPAN3-210ENST00000561277 SUCLA2Q9P2R7 463 aaPredicted RBP22.24■■□□□ 1.15
TSPAN3-210ENST00000561277 CHD9Q3L8U1 2897 aa22.24■■□□□ 1.15
TSPAN3-210ENST00000561277 TMEM265A0A087WTH1 108 aa22.23■■□□□ 1.15
TSPAN3-210ENST00000561277 UPP2O95045 317 aa22.23■■□□□ 1.15
TSPAN3-210ENST00000561277 CA3P07451 260 aa22.23■■□□□ 1.15
TSPAN3-210ENST00000561277 PRPHP41219 470 aa22.23■■□□□ 1.15
TSPAN3-210ENST00000561277 EMC2Q15006 297 aa22.23■■□□□ 1.15
TSPAN3-210ENST00000561277 IL17AQ16552 155 aa22.23■■□□□ 1.15
TSPAN3-210ENST00000561277 RHPN2Q8IUC4 686 aa22.23■■□□□ 1.15
TSPAN3-210ENST00000561277 POLR3CQ9BUI4 534 aaPredicted RBP22.23■■□□□ 1.15
TSPAN3-210ENST00000561277 SEMA6BQ9H3T3 888 aa22.23■■□□□ 1.15
TSPAN3-210ENST00000561277 DHX33Q9H6R0 707 aaKnown RBP22.23■■□□□ 1.15
TSPAN3-210ENST00000561277 MTMR10Q9NXD2 777 aa22.23■■□□□ 1.15
TSPAN3-210ENST00000561277 MTMR6Q9Y217 621 aa22.23■■□□□ 1.15
TSPAN3-210ENST00000561277 PPME1Q9Y570 386 aa22.23■■□□□ 1.15
TSPAN3-210ENST00000561277 PP2D1A8MPX8 630 aa22.22■■□□□ 1.15
TSPAN3-210ENST00000561277 STX6O43752 255 aa22.22■■□□□ 1.15
TSPAN3-210ENST00000561277 GJB5O95377 273 aa22.22■■□□□ 1.15
TSPAN3-210ENST00000561277 RPA1P27694 616 aa22.22■■□□□ 1.15
TSPAN3-210ENST00000561277 CCT6AP40227 531 aaKnown RBP22.22■■□□□ 1.15
TSPAN3-210ENST00000561277 RESTQ13127 1097 aa22.22■■□□□ 1.15
TSPAN3-210ENST00000561277 PPP2R2DQ66LE6 453 aa22.22■■□□□ 1.15
TSPAN3-210ENST00000561277 FAM228AQ86W67 206 aa22.22■■□□□ 1.15
TSPAN3-210ENST00000561277 IGSF22Q8N9C0 903 aa22.22■■□□□ 1.15
TSPAN3-210ENST00000561277 SNX29Q8TEQ0 813 aa22.22■■□□□ 1.15
TSPAN3-210ENST00000561277 TMEM143Q96AN5 459 aa22.22■■□□□ 1.15
TSPAN3-210ENST00000561277 NLRP4Q96MN2 994 aa22.22■■□□□ 1.15
TSPAN3-210ENST00000561277 ZNF576Q9H609 170 aa22.22■■□□□ 1.15
TSPAN3-210ENST00000561277 ERVK-5Q9HDB9 667 aa22.22■■□□□ 1.15
TSPAN3-210ENST00000561277 ANKEF1Q9NU02 776 aa22.22■■□□□ 1.15
TSPAN3-210ENST00000561277 ST3GAL5Q9UNP4 418 aa22.22■■□□□ 1.15
TSPAN3-210ENST00000561277 RARRES1P49788 294 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms