RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 MYOGP15173 224 aa17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 CD52P31358 61 aa17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 KIZQ2M2Z5 673 aa17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 BRAPQ7Z569 592 aa17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 TMCO2Q7Z6W1 182 aaPredicted RBP17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 RTN4RL1Q86UN2 441 aaPredicted RBP17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 CATSPER3Q86XQ3 398 aa17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 DEFB123Q8N688 67 aa17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 IGSF22Q8N9C0 903 aa17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 USP38Q8NB14 1042 aa17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 LINC01599Q8WXQ3 324 aa17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 POLR3CQ9BUI4 534 aaPredicted RBP17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 SEMA6BQ9H3T3 888 aa17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 SUGCTQ9HAC7 445 aa17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 MTMR10Q9NXD2 777 aa17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 PADI3Q9ULW8 664 aa17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 MTMR6Q9Y217 621 aa17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 NOC2LQ9Y3T9 749 aaKnown RBP17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 PPME1Q9Y570 386 aa17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 PCDHA11Q9Y5I1 949 aa17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 LOXHD1Q8IVV2 1947 aa17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 MYO9BQ13459 2157 aa17.09■□□□□ 0.33
SNRPA1-213ENST00000560856 TMEM265A0A087WTH1 108 aa17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 A0A087WWV3 80 aa17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 VPS37CA5D8V6 355 aaPredicted RBP17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 M0QZ92 97 aa17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 LAD1O00515 517 aa17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 TMOD1P28289 359 aa17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 PRPHP41219 470 aa17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 KCNJ6P48051 423 aa17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 CRYBB1P53674 252 aaPredicted RBP17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 NLRP11P59045 1033 aaKnown RBP17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 ATP2C1P98194 919 aaPredicted RBP17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 RESTQ13127 1097 aa17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 PDIA5Q14554 519 aa17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 RAB30Q15771 203 aa17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 FERMT3Q86UX7 667 aa17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 HSCBQ8IWL3 235 aa17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 TIFAQ96CG3 184 aa17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 CEP170P1Q96L14 293 aa17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 PPP1R16BQ96T49 567 aa17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 TMX1Q9H3N1 280 aa17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 ERVK-5Q9HDB9 667 aa17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 TUFT1Q9NNX1 390 aa17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 ANKEF1Q9NU02 776 aa17.08■□□□□ 0.32
SNRPA1-213ENST00000560856 ENPP3O14638 875 aa17.07■□□□□ 0.32
SNRPA1-213ENST00000560856 ARHGEF15O94989 841 aa17.07■□□□□ 0.32
SNRPA1-213ENST00000560856 XRCC6P12956 609 aaKnown RBP eCLIP17.07■□□□□ 0.32
SNRPA1-213ENST00000560856 RPA1P27694 616 aa17.07■□□□□ 0.32
SNRPA1-213ENST00000560856 GPC3P51654 580 aa17.07■□□□□ 0.32
SNRPA1-213ENST00000560856 ECM1Q16610 540 aa17.07■□□□□ 0.32
SNRPA1-213ENST00000560856 TMEM266Q2M3C6 531 aa17.07■□□□□ 0.32
SNRPA1-213ENST00000560856 XKR9Q5GH70 373 aa17.07■□□□□ 0.32
SNRPA1-213ENST00000560856 OTUD6AQ7L8S5 288 aa17.07■□□□□ 0.32
SNRPA1-213ENST00000560856 ZNF710Q8N1W2 664 aa17.07■□□□□ 0.32
SNRPA1-213ENST00000560856 PIGOQ8TEQ8 1089 aa17.07■□□□□ 0.32
SNRPA1-213ENST00000560856 MAP7D2Q96T17 732 aa17.07■□□□□ 0.32
SNRPA1-213ENST00000560856 OSMRQ99650 979 aa17.07■□□□□ 0.32
SNRPA1-213ENST00000560856 NKX2-4Q9H2Z4 354 aa17.07■□□□□ 0.32
SNRPA1-213ENST00000560856 XPNPEP1Q9NQW7 623 aa17.07■□□□□ 0.32
SNRPA1-213ENST00000560856 CHD7Q9P2D1 2997 aa17.07■□□□□ 0.32
SNRPA1-213ENST00000560856 MSRAQ9UJ68 235 aa17.07■□□□□ 0.32
SNRPA1-213ENST00000560856 AKT3Q9Y243 479 aa17.07■□□□□ 0.32
SNRPA1-213ENST00000560856 GINS2Q9Y248 185 aa17.07■□□□□ 0.32
SNRPA1-213ENST00000560856 GBF1Q92538 1859 aa17.07■□□□□ 0.32
SNRPA1-213ENST00000560856 TTC3P53804 2025 aa17.06■□□□□ 0.32
SNRPA1-213ENST00000560856 GJB5O95377 273 aa17.06■□□□□ 0.32
SNRPA1-213ENST00000560856 RFC5P40937 340 aa17.06■□□□□ 0.32
SNRPA1-213ENST00000560856 RARRES1P49788 294 aa17.06■□□□□ 0.32
SNRPA1-213ENST00000560856 ZNF697Q5TEC3 545 aa17.06■□□□□ 0.32
SNRPA1-213ENST00000560856 FAM228AQ86W67 206 aa17.06■□□□□ 0.32
SNRPA1-213ENST00000560856 CRIPAKQ8N1N5 446 aa17.06■□□□□ 0.32
SNRPA1-213ENST00000560856 TOP1MTQ969P6 601 aa17.06■□□□□ 0.32
SNRPA1-213ENST00000560856 ZNF668Q96K58 619 aaPredicted RBP17.06■□□□□ 0.32
SNRPA1-213ENST00000560856 GUCD1Q96NT3 240 aa17.06■□□□□ 0.32
SNRPA1-213ENST00000560856 ZNF576Q9H609 170 aa17.06■□□□□ 0.32
SNRPA1-213ENST00000560856 SUCLA2Q9P2R7 463 aaPredicted RBP17.06■□□□□ 0.32
SNRPA1-213ENST00000560856 LRWD1Q9UFC0 647 aa17.06■□□□□ 0.32
SNRPA1-213ENST00000560856 ST3GAL5Q9UNP4 418 aa17.06■□□□□ 0.32
SNRPA1-213ENST00000560856 PP2D1A8MPX8 630 aa17.05■□□□□ 0.32
SNRPA1-213ENST00000560856 MGEA5O60502 916 aa17.05■□□□□ 0.32
SNRPA1-213ENST00000560856 RPS6KA5O75582 802 aa17.05■□□□□ 0.32
SNRPA1-213ENST00000560856 EIF4BP23588 611 aaKnown RBP17.05■□□□□ 0.32
SNRPA1-213ENST00000560856 PAK2Q13177 524 aa17.05■□□□□ 0.32
SNRPA1-213ENST00000560856 MYOCDQ8IZQ8 938 aa17.05■□□□□ 0.32
SNRPA1-213ENST00000560856 FAM161BQ96MY7 647 aa17.05■□□□□ 0.32
SNRPA1-213ENST00000560856 JPH2Q9BR39 696 aaPredicted RBP17.05■□□□□ 0.32
SNRPA1-213ENST00000560856 MMTAG2Q9BU76 263 aaKnown RBP17.05■□□□□ 0.32
SNRPA1-213ENST00000560856 TSPYL2Q9H2G4 693 aaPredicted RBP17.05■□□□□ 0.32
SNRPA1-213ENST00000560856 LCHNA4D1U4 455 aa17.04■□□□□ 0.32
SNRPA1-213ENST00000560856 STX6O43752 255 aa17.04■□□□□ 0.32
SNRPA1-213ENST00000560856 AMHP03971 560 aa17.04■□□□□ 0.32
SNRPA1-213ENST00000560856 DARSP14868 501 aaKnown RBP17.04■□□□□ 0.32
SNRPA1-213ENST00000560856 MUTP22033 750 aa17.04■□□□□ 0.32
SNRPA1-213ENST00000560856 DNM2P50570 870 aa17.04■□□□□ 0.32
SNRPA1-213ENST00000560856 POLGP54098 1239 aaPredicted RBP17.04■□□□□ 0.32
SNRPA1-213ENST00000560856 HTRA4P83105 476 aaPredicted RBP17.04■□□□□ 0.32
SNRPA1-213ENST00000560856 DSC3Q14574 896 aa17.04■□□□□ 0.32
SNRPA1-213ENST00000560856 EMC2Q15006 297 aa17.04■□□□□ 0.32
SNRPA1-213ENST00000560856 ARL6IP4Q66PJ3 421 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms