RNA–Protein interactions for RNA: ENST00000560483.1

LRRC28-219, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-219ENST00000560483 FAM49AQ9H0Q0 323 aaPredicted RBP9.01□□□□□ -0.97
LRRC28-219ENST00000560483 RNPEPQ9H4A4 650 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 DISC1Q9NRI5 854 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 GABBR1Q9UBS5 961 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 PCDHA10Q9Y5I2 948 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 NRCAMQ92823 1304 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 LTBP2Q14767 1821 aa9.01□□□□□ -0.97
LRRC28-219ENST00000560483 HAS3O00219 553 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 SLC37A4O43826 429 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 NEMFO60524 1076 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 CCNE2O96020 404 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 FGBP02675 491 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 ACTN1P12814 892 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 HOXD8P13378 290 aaPredicted RBP9□□□□□ -0.97
LRRC28-219ENST00000560483 IBSPP21815 317 aaPredicted RBP9□□□□□ -0.97
LRRC28-219ENST00000560483 SFNP31947 248 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 TXKP42681 527 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 PTK7Q13308 1070 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 SHHQ15465 462 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 NPY5RQ15761 445 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 EARS2Q5JPH6 523 aaKnown RBP9□□□□□ -0.97
LRRC28-219ENST00000560483 LARP1BQ659C4 914 aaKnown RBP9□□□□□ -0.97
LRRC28-219ENST00000560483 PSRC1Q6PGN9 363 aaPredicted RBP9□□□□□ -0.97
LRRC28-219ENST00000560483 LRRC8DQ7L1W4 858 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 OTOP2Q7RTS6 562 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 SESTD1Q86VW0 696 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 METTL13Q8N6R0 699 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 FBXO18Q8NFZ0 1043 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 AFAP1L1Q8TED9 768 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 LMBR1Q8WVP7 490 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 SCLT1Q96NL6 688 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 RIT2Q99578 217 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 UNC45AQ9H3U1 944 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 IL23AQ9NPF7 189 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 TUBE1Q9UJT0 475 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 GINS2Q9Y248 185 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 EMSYQ7Z589 1322 aa9□□□□□ -0.97
LRRC28-219ENST00000560483 SCN5AQ14524 2016 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 RRN3P2A6NIE6 340 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 RSPH10B2B2RC85 870 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 M0R2N6 131 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 RSPH10BP0C881 870 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 CKBP12277 381 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 INSRRP14616 1297 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 SELPP16109 830 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 BMP8BP34820 402 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 KCNJ6P48051 423 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 SLC26A2P50443 739 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 TMEM62Q0P6H9 643 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 PLCB4Q15147 1175 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 ZNF174Q15697 407 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 TMEM266Q2M3C6 531 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 C9orf50Q5SZB4 431 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 PPP4R3AQ6IN85 833 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 MOXD1Q6UVY6 613 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 ABHD15Q6UXT9 468 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 ZNF365Q70YC5 407 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 PLPPR4Q7Z2D5 763 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 NOSTRINQ8IVI9 506 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 CCDC60Q8IWA6 550 aaPredicted RBP8.99□□□□□ -0.97
LRRC28-219ENST00000560483 SLFN12Q8IYM2 578 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 BANK1Q8NDB2 785 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 TRAPPC12Q8WVT3 735 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 CRYGNQ8WXF5 182 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 SLC5A5Q92911 643 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 LENG9Q96B70 501 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 FAM20AQ96MK3 541 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 PPP1R16BQ96T49 567 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 WNT8AQ9H1J5 351 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 FOXP1Q9H334 677 aaPredicted RBP8.99□□□□□ -0.97
LRRC28-219ENST00000560483 NRBP2Q9NSY0 501 aa8.99□□□□□ -0.97
LRRC28-219ENST00000560483 CYP3A7-CYP3A51PA0A087WV96 503 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 LOC100996750A0A140TA64 210 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 A0A1W2PPC1 479 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 K7ELQ4 463 aaPredicted RBP8.98□□□□□ -0.97
LRRC28-219ENST00000560483 DHX15O43143 795 aaKnown RBP8.98□□□□□ -0.97
LRRC28-219ENST00000560483 HBP1O60381 514 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 LGR5O75473 907 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 IQCF3P0C7M6 154 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 CYP3A7P24462 503 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 RFC2P35250 354 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 MTERF2Q49AM1 385 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 TTC38Q5R3I4 469 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 ZNF618Q5T7W0 954 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 TAF2Q6P1X5 1199 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 ATP8B4Q8TF62 1192 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 DNAJB3Q8WWF6 145 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 ZBTB10Q96DT7 871 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 FAM167AQ96KS9 214 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 PCYT2Q99447 389 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.98□□□□□ -0.97
LRRC28-219ENST00000560483 KRTAP4-6Q9BYQ5 205 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 SUGCTQ9HAC7 445 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 PCDHA12Q9UN75 941 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 CEP131Q9UPN4 1083 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 SLC4A7Q9Y6M7 1214 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 EVPLQ92817 2033 aa8.98□□□□□ -0.97
LRRC28-219ENST00000560483 DKC1O60832 514 aaKnown RBP eCLIP8.97□□□□□ -0.97
LRRC28-219ENST00000560483 PSMD10O75832 226 aa8.97□□□□□ -0.97
LRRC28-219ENST00000560483 ATG7O95352 703 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 179.4 ms