RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 TBC1D16Q8TBP0 767 aa14.46□□□□□ -0.1
TRAF3-208ENST00000560371 TMEM106CQ9BVX2 250 aa14.46□□□□□ -0.1
TRAF3-208ENST00000560371 ELP3Q9H9T3 547 aa14.46□□□□□ -0.1
TRAF3-208ENST00000560371 CDC23Q9UJX2 597 aa14.46□□□□□ -0.1
TRAF3-208ENST00000560371 KPNA2P52292 529 aaKnown RBP14.46□□□□□ -0.1
TRAF3-208ENST00000560371 SLC16A4O15374 487 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 CDC25BP30305 580 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 PLTPP55058 493 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 PDE1CQ14123 709 aaPredicted RBP14.45□□□□□ -0.1
TRAF3-208ENST00000560371 TDRD7Q8NHU6 1098 aaKnown RBP14.45□□□□□ -0.1
TRAF3-208ENST00000560371 ADAM22Q9P0K1 906 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 NEMP1O14524 444 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 ALX1Q15699 326 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 TOGARAM2Q6ZUX3 1019 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.45□□□□□ -0.1
TRAF3-208ENST00000560371 DYDC2Q96IM9 177 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 EPB41L5Q9HCM4 733 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 ADAMTS1Q9UHI8 967 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 UNC13BO14795 1591 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 GRM4Q14833 912 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 TMEM35BQ8NCS4 154 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 ZWILCHQ9H900 591 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 POTEB3A0JP26 581 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 POTECB2RU33 542 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 TJP3O95049 919 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 SOX5P35711 763 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 FOXO4P98177 505 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 SLC12A1Q13621 1099 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 POTEBQ6S5H4 581 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 CYFIP1Q7L576 1253 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 HACL1Q9UJ83 578 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 GSG1L2A8MUP6 293 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 C11orf57Q6ZUT1 292 aaPredicted RBP14.45□□□□□ -0.1
TRAF3-208ENST00000560371 OR6J1Q8NGC5 347 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 SDCCAG3Q96C92 435 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 ZNF668Q96K58 619 aaPredicted RBP14.45□□□□□ -0.1
TRAF3-208ENST00000560371 LXNQ9BS40 222 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 JPH1Q9HDC5 661 aaPredicted RBP14.45□□□□□ -0.1
TRAF3-208ENST00000560371 ATP8A1Q9Y2Q0 1164 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 WDR19Q8NEZ3 1342 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 POTEFA5A3E0 1075 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 POTEIP0CG38 1075 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 PSMC5P62195 406 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 POTEGQ6S5H5 508 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 POTEEQ6S8J3 1075 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 ZNF280CQ8ND82 737 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 LPAR1Q92633 364 aa14.45□□□□□ -0.1
TRAF3-208ENST00000560371 NR3C1P04150 777 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 RCAN1P53805 252 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 IL9RQ01113 521 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 ORC2Q13416 577 aaPredicted RBP14.44□□□□□ -0.1
TRAF3-208ENST00000560371 RESP18Q5W5W9 173 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 ALKBH5Q6P6C2 394 aaKnown RBP14.44□□□□□ -0.1
TRAF3-208ENST00000560371 MIPOL1Q8TD10 442 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 OLA1Q9NTK5 396 aaKnown RBP14.44□□□□□ -0.1
TRAF3-208ENST00000560371 CD2BP2O95400 341 aaKnown RBP14.44□□□□□ -0.1
TRAF3-208ENST00000560371 LARGE1O95461 756 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 GCLMP48507 274 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 SNAPC2Q13487 334 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 TMEM270Q6UE05 265 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 PDCD6IPQ8WUM4 868 aaKnown RBP14.44□□□□□ -0.1
TRAF3-208ENST00000560371 TEX13BQ9BXU2 312 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 ANAPC7Q9UJX3 599 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 FTCDO95954 541 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 CASP2P42575 452 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 USP11P51784 963 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 PTPN21Q16825 1174 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 LDHDQ86WU2 507 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 WHAMMQ8TF30 809 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 PPP1R13BQ96KQ4 1090 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 FAM8A1Q9UBU6 413 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 KLC3Q6P597 504 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 PASD1Q8IV76 773 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 RHOT2Q8IXI1 618 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 SPTLC3Q9NUV7 552 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 NRBP1Q9UHY1 535 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 ZBTB12Q9Y330 459 aaPredicted RBP14.44□□□□□ -0.1
TRAF3-208ENST00000560371 PCDHA10Q9Y5I2 948 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 NBPF26B4DH59 902 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 TXNP10599 105 aaKnown RBP14.44□□□□□ -0.1
TRAF3-208ENST00000560371 PRR5LQ6MZQ0 368 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 NBPF10Q6P3W6 841 aaKnown RBP14.44□□□□□ -0.1
TRAF3-208ENST00000560371 SFR1Q86XK3 245 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 NBPF15Q8N660 670 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 MOSPD1Q9UJG1 213 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 PCDHA13Q9Y5I0 950 aa14.44□□□□□ -0.1
TRAF3-208ENST00000560371 NDUFA10O95299 355 aa14.43□□□□□ -0.1
TRAF3-208ENST00000560371 TEX2Q8IWB9 1127 aa14.43□□□□□ -0.1
TRAF3-208ENST00000560371 VCX3AQ9NNX9 186 aa14.43□□□□□ -0.1
TRAF3-208ENST00000560371 ABCF3Q9NUQ8 709 aa14.43□□□□□ -0.1
TRAF3-208ENST00000560371 INTS9Q9NV88 658 aaKnown RBP14.43□□□□□ -0.1
TRAF3-208ENST00000560371 RNF14Q9UBS8 474 aa14.43□□□□□ -0.1
TRAF3-208ENST00000560371 TBXAS1P24557 533 aaPredicted RBP14.43□□□□□ -0.1
TRAF3-208ENST00000560371 TRIM42Q8IWZ5 723 aa14.43□□□□□ -0.1
TRAF3-208ENST00000560371 ZNF579Q8NAF0 562 aaKnown RBP14.43□□□□□ -0.1
TRAF3-208ENST00000560371 NEDD1Q8NHV4 660 aa14.43□□□□□ -0.1
TRAF3-208ENST00000560371 HVCN1Q96D96 273 aa14.43□□□□□ -0.1
TRAF3-208ENST00000560371 PAMP19021 973 aa14.43□□□□□ -0.1
TRAF3-208ENST00000560371 PDIK1LQ8N165 341 aa14.43□□□□□ -0.1
TRAF3-208ENST00000560371 TMEM260Q9NX78 707 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms