RNA–Protein interactions for RNA: ENST00000560269.1

HMBOX1-213, Transcript of homeobox containing 1, humanhuman

TSL 4

Gene HMBOX1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-213ENST00000560269 SGPL1O95470 568 aa15.15■□□□□ 0.02
HMBOX1-213ENST00000560269 MYCNP04198 464 aaPredicted RBP15.15■□□□□ 0.02
HMBOX1-213ENST00000560269 RPN1P04843 607 aaKnown RBP15.15■□□□□ 0.02
HMBOX1-213ENST00000560269 KRT18P05783 430 aaKnown RBP15.15■□□□□ 0.02
HMBOX1-213ENST00000560269 SMIM10L2AP0DMW4 78 aa15.15■□□□□ 0.02
HMBOX1-213ENST00000560269 SMIM10L2BP0DMW5 78 aa15.15■□□□□ 0.02
HMBOX1-213ENST00000560269 HOXC8P31273 242 aa15.15■□□□□ 0.02
HMBOX1-213ENST00000560269 ASIC1P78348 528 aa15.15■□□□□ 0.02
HMBOX1-213ENST00000560269 PPFIA1Q13136 1202 aa15.15■□□□□ 0.02
HMBOX1-213ENST00000560269 MAPK7Q13164 816 aa15.15■□□□□ 0.02
HMBOX1-213ENST00000560269 KCNB1Q14721 858 aa15.15■□□□□ 0.02
HMBOX1-213ENST00000560269 GRIK4Q16099 956 aa15.15■□□□□ 0.02
HMBOX1-213ENST00000560269 ZSCAN23Q3MJ62 389 aa15.15■□□□□ 0.02
HMBOX1-213ENST00000560269 UNC13DQ70J99 1090 aa15.15■□□□□ 0.02
HMBOX1-213ENST00000560269 MCPH1Q8NEM0 835 aa15.15■□□□□ 0.02
HMBOX1-213ENST00000560269 MCOLN1Q9GZU1 580 aa15.15■□□□□ 0.02
HMBOX1-213ENST00000560269 ATP6V0A4Q9HBG4 840 aa15.15■□□□□ 0.02
HMBOX1-213ENST00000560269 XPNPEP1Q9NQW7 623 aa15.15■□□□□ 0.02
HMBOX1-213ENST00000560269 PHF24Q9UPV7 400 aa15.15■□□□□ 0.02
HMBOX1-213ENST00000560269 BRCA2P51587 3418 aa15.15■□□□□ 0.02
HMBOX1-213ENST00000560269 KAT6AQ92794 2004 aa15.14■□□□□ 0.01
HMBOX1-213ENST00000560269 KBTBD13C9JR72 458 aa15.14■□□□□ 0.01
HMBOX1-213ENST00000560269 GAS2O43903 313 aaKnown RBP15.14■□□□□ 0.01
HMBOX1-213ENST00000560269 HIP1RO75146 1068 aa15.14■□□□□ 0.01
HMBOX1-213ENST00000560269 C22orf31O95567 290 aa15.14■□□□□ 0.01
HMBOX1-213ENST00000560269 CAPN2P17655 700 aa15.14■□□□□ 0.01
HMBOX1-213ENST00000560269 ZNF131P52739 623 aa15.14■□□□□ 0.01
HMBOX1-213ENST00000560269 POLGP54098 1239 aaPredicted RBP15.14■□□□□ 0.01
HMBOX1-213ENST00000560269 ADAM17P78536 824 aa15.14■□□□□ 0.01
HMBOX1-213ENST00000560269 EHHADHQ08426 723 aa15.14■□□□□ 0.01
HMBOX1-213ENST00000560269 TBC1D8BQ0IIM8 1120 aa15.14■□□□□ 0.01
HMBOX1-213ENST00000560269 EMC2Q15006 297 aa15.14■□□□□ 0.01
HMBOX1-213ENST00000560269 NBPF20Q3BBV1 942 aa15.14■□□□□ 0.01
HMBOX1-213ENST00000560269 MARCH8Q5T0T0 291 aa15.14■□□□□ 0.01
HMBOX1-213ENST00000560269 SESTD1Q86VW0 696 aa15.14■□□□□ 0.01
HMBOX1-213ENST00000560269 CCDC65Q8IXS2 484 aa15.14■□□□□ 0.01
HMBOX1-213ENST00000560269 DAW1Q8N136 415 aa15.14■□□□□ 0.01
HMBOX1-213ENST00000560269 U2AF1L4Q8WU68 220 aaKnown RBP15.14■□□□□ 0.01
HMBOX1-213ENST00000560269 TRAPPC12Q8WVT3 735 aa15.14■□□□□ 0.01
HMBOX1-213ENST00000560269 SLC7A3Q8WY07 619 aa15.14■□□□□ 0.01
HMBOX1-213ENST00000560269 JPH2Q9BR39 696 aaPredicted RBP15.14■□□□□ 0.01
HMBOX1-213ENST00000560269 MYH11P35749 1972 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 MAGEB2O15479 319 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 RHOBTB3O94955 611 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 IDEP14735 1019 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 KLRC1P26715 233 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 GJA8P48165 433 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 CACNB1Q02641 598 aaPredicted RBP15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 RAD51AP2Q09MP3 1159 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 KMT5BQ4FZB7 885 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 NFRKBQ6P4R8 1299 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 MTHFD1LQ6UB35 978 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 LINC01465Q8N7H1 131 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 C7orf31Q8N865 590 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 TRIML1Q8N9V2 468 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 LMBR1Q8WVP7 490 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 KIFAP3Q92845 792 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 CCDC47Q96A33 483 aaKnown RBP15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 DRC1Q96MC2 740 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 GLT1D1Q96MS3 346 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 SETD4Q9NVD3 440 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 PANK4Q9NVE7 773 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 RMND1Q9NWS8 449 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 HDAC6Q9UBN7 1215 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 MAN1B1Q9UKM7 699 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 COL4A3BPQ9Y5P4 624 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 GRIN2DO15399 1336 aa15.13■□□□□ 0.01
HMBOX1-213ENST00000560269 A0A1W2PQ45 241 aaPredicted RBP15.12■□□□□ 0.01
HMBOX1-213ENST00000560269 A0A1W2PQY0 241 aa15.12■□□□□ 0.01
HMBOX1-213ENST00000560269 C17orf102A2RUQ5 167 aa15.12■□□□□ 0.01
HMBOX1-213ENST00000560269 MBLAC1A4D2B0 266 aaPredicted RBP15.12■□□□□ 0.01
HMBOX1-213ENST00000560269 RSPH10B2B2RC85 870 aa15.12■□□□□ 0.01
HMBOX1-213ENST00000560269 TBCAO75347 108 aaKnown RBP15.12■□□□□ 0.01
HMBOX1-213ENST00000560269 RSPH10BP0C881 870 aa15.12■□□□□ 0.01
HMBOX1-213ENST00000560269 GNAT1P11488 350 aa15.12■□□□□ 0.01
HMBOX1-213ENST00000560269 GAP43P17677 238 aa15.12■□□□□ 0.01
HMBOX1-213ENST00000560269 RTP1P59025 263 aa15.12■□□□□ 0.01
HMBOX1-213ENST00000560269 CHMP4BP1P59074 171 aa15.12■□□□□ 0.01
HMBOX1-213ENST00000560269 IGBP1P78318 339 aa15.12■□□□□ 0.01
HMBOX1-213ENST00000560269 PTPN11Q06124 597 aaPredicted RBP15.12■□□□□ 0.01
HMBOX1-213ENST00000560269 COASYQ13057 564 aa15.12■□□□□ 0.01
HMBOX1-213ENST00000560269 ITGA7Q13683 1181 aa15.12■□□□□ 0.01
HMBOX1-213ENST00000560269 MORC3Q14149 939 aa15.12■□□□□ 0.01
HMBOX1-213ENST00000560269 HIC1Q14526 733 aa15.12■□□□□ 0.01
HMBOX1-213ENST00000560269 FAM102BQ5T8I3 360 aa15.12■□□□□ 0.01
HMBOX1-213ENST00000560269 RETREG2Q8NC44 543 aa15.12■□□□□ 0.01
HMBOX1-213ENST00000560269 EXOC1Q9NV70 894 aa15.12■□□□□ 0.01
HMBOX1-213ENST00000560269 GTF2IRD1Q9UHL9 959 aa15.12■□□□□ 0.01
HMBOX1-213ENST00000560269 PCDHA2Q9Y5H9 948 aa15.12■□□□□ 0.01
HMBOX1-213ENST00000560269 SYCE3A1L190 88 aa15.11■□□□□ 0.01
HMBOX1-213ENST00000560269 FAM13AO94988 1023 aa15.11■□□□□ 0.01
HMBOX1-213ENST00000560269 TFRCP02786 760 aaKnown RBP15.11■□□□□ 0.01
HMBOX1-213ENST00000560269 ARL2P36404 184 aa15.11■□□□□ 0.01
HMBOX1-213ENST00000560269 MNX1P50219 401 aaPredicted RBP15.11■□□□□ 0.01
HMBOX1-213ENST00000560269 PSMD2Q13200 908 aa15.11■□□□□ 0.01
HMBOX1-213ENST00000560269 MKRN4PQ13434 485 aaPredicted RBP15.11■□□□□ 0.01
HMBOX1-213ENST00000560269 IER5Q5VY09 327 aa15.11■□□□□ 0.01
HMBOX1-213ENST00000560269 EFCAB12Q6NXP0 572 aa15.11■□□□□ 0.01
HMBOX1-213ENST00000560269 MAEAQ7L5Y9 396 aa15.11■□□□□ 0.01
HMBOX1-213ENST00000560269 ANKLE1Q8NAG6 615 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms