RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 CDC42EP1Q00587 391 aa14.83□□□□□ -0.04
SMAD3-213ENST00000560175 CALCRLQ16602 461 aa14.83□□□□□ -0.04
SMAD3-213ENST00000560175 MYOCDQ8IZQ8 938 aa14.83□□□□□ -0.04
SMAD3-213ENST00000560175 METTL13Q8N6R0 699 aa14.83□□□□□ -0.04
SMAD3-213ENST00000560175 C4orf32Q8N8J7 132 aa14.83□□□□□ -0.04
SMAD3-213ENST00000560175 ZNF689Q96CS4 500 aaPredicted RBP14.83□□□□□ -0.04
SMAD3-213ENST00000560175 ZBED2Q9BTP6 218 aa14.83□□□□□ -0.04
SMAD3-213ENST00000560175 TMX1Q9H3N1 280 aa14.83□□□□□ -0.04
SMAD3-213ENST00000560175 TTC12Q9H892 705 aaPredicted RBP14.83□□□□□ -0.04
SMAD3-213ENST00000560175 NOC2LQ9Y3T9 749 aaKnown RBP14.83□□□□□ -0.04
SMAD3-213ENST00000560175 REV3LO60673 3130 aa14.82□□□□□ -0.04
SMAD3-213ENST00000560175 LINC01553A4QN01 128 aa14.82□□□□□ -0.04
SMAD3-213ENST00000560175 DDX11L8A8MPP1 907 aa14.82□□□□□ -0.04
SMAD3-213ENST00000560175 VTNP04004 478 aa14.82□□□□□ -0.04
SMAD3-213ENST00000560175 FOSL2P15408 326 aa14.82□□□□□ -0.04
SMAD3-213ENST00000560175 TOB1P50616 345 aaPredicted RBP14.82□□□□□ -0.04
SMAD3-213ENST00000560175 CLCN3P51790 818 aa14.82□□□□□ -0.04
SMAD3-213ENST00000560175 NLRP11P59045 1033 aaKnown RBP14.82□□□□□ -0.04
SMAD3-213ENST00000560175 TBC1D8BQ0IIM8 1120 aa14.82□□□□□ -0.04
SMAD3-213ENST00000560175 CUL4AQ13619 759 aa14.82□□□□□ -0.04
SMAD3-213ENST00000560175 ODR4Q5SWX8 454 aa14.82□□□□□ -0.04
SMAD3-213ENST00000560175 TRMT1LQ7Z2T5 733 aaKnown RBP14.82□□□□□ -0.04
SMAD3-213ENST00000560175 DHX33Q9H6R0 707 aaKnown RBP14.82□□□□□ -0.04
SMAD3-213ENST00000560175 ZSWIM4Q9H7M6 989 aa14.82□□□□□ -0.04
SMAD3-213ENST00000560175 CYP26B1Q9NR63 512 aa14.82□□□□□ -0.04
SMAD3-213ENST00000560175 RGL1Q9NZL6 768 aa14.82□□□□□ -0.04
SMAD3-213ENST00000560175 KIF3AQ9Y496 699 aa14.82□□□□□ -0.04
SMAD3-213ENST00000560175 A0A0C4DFX4 3053 aa14.82□□□□□ -0.04
SMAD3-213ENST00000560175 ARID2Q68CP9 1835 aa14.82□□□□□ -0.04
SMAD3-213ENST00000560175 PRRC2BQ5JSZ5 2229 aaKnown RBP14.81□□□□□ -0.04
SMAD3-213ENST00000560175 RALGAPA2Q2PPJ7 1873 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 TMEM150BA6NC51 233 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 EPOPA6NHQ4 379 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 GPR182O15218 404 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 MARCH6O60337 910 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 LPXNO60711 386 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 RPS6KA5O75582 802 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 LINC00271P0C7V0 271 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 XRCC6P12956 609 aaKnown RBP eCLIP14.81□□□□□ -0.04
SMAD3-213ENST00000560175 EIF4BP23588 611 aaKnown RBP14.81□□□□□ -0.04
SMAD3-213ENST00000560175 GPC3P51654 580 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 FAM189BP81408 668 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 PAK2Q13177 524 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 DRP2Q13474 957 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 DSC3Q14574 896 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 KIZQ2M2Z5 673 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 MTERF2Q49AM1 385 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 SPRED2Q7Z698 418 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 FAM228AQ86W67 206 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 EXOC8Q8IYI6 725 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 LRRC71Q8N4P6 559 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 ZNF579Q8NAF0 562 aaKnown RBP14.81□□□□□ -0.04
SMAD3-213ENST00000560175 MAFAQ8NHW3 353 aaPredicted RBP14.81□□□□□ -0.04
SMAD3-213ENST00000560175 NEK9Q8TD19 979 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 DYDC2Q96IM9 177 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 MAP7D2Q96T17 732 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 GAS2L1Q99501 681 aaPredicted RBP14.81□□□□□ -0.04
SMAD3-213ENST00000560175 EIF2AK1Q9BQI3 630 aaKnown RBP14.81□□□□□ -0.04
SMAD3-213ENST00000560175 LXNQ9BS40 222 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 SEPT9Q9UHD8 586 aaPredicted RBP14.81□□□□□ -0.04
SMAD3-213ENST00000560175 ST3GAL5Q9UNP4 418 aa14.81□□□□□ -0.04
SMAD3-213ENST00000560175 NLRC5Q86WI3 1866 aa14.8□□□□□ -0.04
SMAD3-213ENST00000560175 DGKIO75912 1065 aa14.8□□□□□ -0.04
SMAD3-213ENST00000560175 SPATA31C1P0DKV0 1188 aa14.8□□□□□ -0.04
SMAD3-213ENST00000560175 YWHABP31946 246 aaKnown RBP14.8□□□□□ -0.04
SMAD3-213ENST00000560175 MCM7P33993 719 aa14.8□□□□□ -0.04
SMAD3-213ENST00000560175 TXKP42681 527 aa14.8□□□□□ -0.04
SMAD3-213ENST00000560175 NPEPPSP55786 919 aa14.8□□□□□ -0.04
SMAD3-213ENST00000560175 OTUD6AQ7L8S5 288 aa14.8□□□□□ -0.04
SMAD3-213ENST00000560175 TGS1Q96RS0 853 aaKnown RBP14.8□□□□□ -0.04
SMAD3-213ENST00000560175 OSMRQ99650 979 aa14.8□□□□□ -0.04
SMAD3-213ENST00000560175 JPH2Q9BR39 696 aaPredicted RBP14.8□□□□□ -0.04
SMAD3-213ENST00000560175 SUGCTQ9HAC7 445 aa14.8□□□□□ -0.04
SMAD3-213ENST00000560175 RGS18Q9NS28 235 aa14.8□□□□□ -0.04
SMAD3-213ENST00000560175 LMCD1Q9NZU5 365 aa14.8□□□□□ -0.04
SMAD3-213ENST00000560175 GTF3C3Q9Y5Q9 886 aa14.8□□□□□ -0.04
SMAD3-213ENST00000560175 C9IYK1 514 aa14.79□□□□□ -0.04
SMAD3-213ENST00000560175 ZBTB39O15060 712 aa14.79□□□□□ -0.04
SMAD3-213ENST00000560175 MGEA5O60502 916 aa14.79□□□□□ -0.04
SMAD3-213ENST00000560175 DARSP14868 501 aaKnown RBP14.79□□□□□ -0.04
SMAD3-213ENST00000560175 GJB2P29033 226 aa14.79□□□□□ -0.04
SMAD3-213ENST00000560175 DNM2P50570 870 aa14.79□□□□□ -0.04
SMAD3-213ENST00000560175 CTTNQ14247 550 aaKnown RBP14.79□□□□□ -0.04
SMAD3-213ENST00000560175 ZNF174Q15697 407 aa14.79□□□□□ -0.04
SMAD3-213ENST00000560175 TMEM266Q2M3C6 531 aa14.79□□□□□ -0.04
SMAD3-213ENST00000560175 TTC38Q5R3I4 469 aa14.79□□□□□ -0.04
SMAD3-213ENST00000560175 NCAPH2Q6IBW4 605 aa14.79□□□□□ -0.04
SMAD3-213ENST00000560175 FAM117BQ6P1L5 589 aa14.79□□□□□ -0.04
SMAD3-213ENST00000560175 ZNF410Q86VK4 478 aa14.79□□□□□ -0.04
SMAD3-213ENST00000560175 CLP1Q92989 425 aaKnown RBP14.79□□□□□ -0.04
SMAD3-213ENST00000560175 SAMD11Q96NU1 681 aa14.79□□□□□ -0.04
SMAD3-213ENST00000560175 SH2D3AQ9BRG2 576 aa14.79□□□□□ -0.04
SMAD3-213ENST00000560175 ANKEF1Q9NU02 776 aa14.79□□□□□ -0.04
SMAD3-213ENST00000560175 AKT3Q9Y243 479 aa14.79□□□□□ -0.04
SMAD3-213ENST00000560175 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.79□□□□□ -0.04
SMAD3-213ENST00000560175 MTCH2Q9Y6C9 303 aa14.79□□□□□ -0.04
SMAD3-213ENST00000560175 FNDC1Q4ZHG4 1894 aaPredicted RBP14.78□□□□□ -0.04
SMAD3-213ENST00000560175 RFXAPO00287 272 aa14.78□□□□□ -0.04
SMAD3-213ENST00000560175 GAS2O43903 313 aaKnown RBP14.78□□□□□ -0.04
SMAD3-213ENST00000560175 UPP2O95045 317 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms