RNA–Protein interactions for RNA: ENST00000560166.1

CLPX-206, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 3

Gene CLPX, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-206ENST00000560166 MEGF10Q96KG7 1140 aa7.08□□□□□ -1.28
CLPX-206ENST00000560166 ANP32EQ9BTT0 268 aa7.08□□□□□ -1.28
CLPX-206ENST00000560166 ZMYND12Q9H0C1 365 aa7.08□□□□□ -1.28
CLPX-206ENST00000560166 JMJD4Q9H9V9 463 aa7.08□□□□□ -1.28
CLPX-206ENST00000560166 EFCC1Q9HA90 598 aa7.08□□□□□ -1.28
CLPX-206ENST00000560166 JPH1Q9HDC5 661 aaPredicted RBP7.08□□□□□ -1.28
CLPX-206ENST00000560166 RTEL1Q9NZ71 1219 aa7.08□□□□□ -1.28
CLPX-206ENST00000560166 FEM1BQ9UK73 627 aa7.08□□□□□ -1.28
CLPX-206ENST00000560166 POLR2AP24928 1970 aaKnown RBP7.08□□□□□ -1.28
CLPX-206ENST00000560166 KIAA1324LA8MWY0 1029 aaPredicted RBP7.07□□□□□ -1.28
CLPX-206ENST00000560166 STXBP3O00186 592 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 USP2O75604 605 aaPredicted RBP7.07□□□□□ -1.28
CLPX-206ENST00000560166 MED26O95402 600 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 MBD3O95983 291 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 GOLGA8HP0CJ92 632 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 STAT2P52630 851 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 BACE1P56817 501 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 ORC2Q13416 577 aaPredicted RBP7.07□□□□□ -1.28
CLPX-206ENST00000560166 GNL2Q13823 731 aaKnown RBP7.07□□□□□ -1.28
CLPX-206ENST00000560166 NPY5RQ15761 445 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 SHROOM1Q2M3G4 852 aaPredicted RBP7.07□□□□□ -1.28
CLPX-206ENST00000560166 SLC9C1Q4G0N8 1177 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 ZNF394Q53GI3 561 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 SYDE2Q5VT97 1194 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 WWC2Q6AWC2 1192 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 ARMC9Q7Z3E5 817 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 FERMT3Q86UX7 667 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 ANKRD13AQ8IZ07 590 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 ADGRF4Q8IZF3 695 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 DTWD1Q8N5C7 304 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 SAMD3Q8N6K7 520 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 C1orf127Q8N9H9 656 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 KCNG4Q8TDN1 519 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 ACER1Q8TDN7 264 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 UBXN4Q92575 508 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 ARMC5Q96C12 935 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 AIFM3Q96NN9 605 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 FEZ1Q99689 392 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 TINF2Q9BSI4 451 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 CHRDQ9H2X0 955 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 C6orf50Q9HD87 102 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 CNTN3Q9P232 1028 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 RCOR1Q9UKL0 485 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 PCDHA4Q9UN74 947 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.07□□□□□ -1.28
CLPX-206ENST00000560166 CSADQ9Y600 493 aa7.07□□□□□ -1.28
CLPX-206ENST00000560166 FRMPD2Q68DX3 1309 aaPredicted RBP7.06□□□□□ -1.28
CLPX-206ENST00000560166 MKI67P46013 3256 aaKnown RBP7.06□□□□□ -1.28
CLPX-206ENST00000560166 RBBP6Q7Z6E9 1792 aaKnown RBP7.06□□□□□ -1.28
CLPX-206ENST00000560166 TMEM232C9JQI7 657 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 CXCL11O14625 94 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 GIPC1O14908 333 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 EREGO14944 169 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 GADD45BO75293 160 aaPredicted RBP7.06□□□□□ -1.28
CLPX-206ENST00000560166 USP17L7P0C7H9 530 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 NCLP19338 710 aaKnown RBP7.06□□□□□ -1.28
CLPX-206ENST00000560166 NLRP5P59047 1200 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 UBE2HP62256 183 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 PPATQ06203 517 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 VGLL4Q14135 290 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 CDC37Q16543 378 aaPredicted RBP7.06□□□□□ -1.28
CLPX-206ENST00000560166 KLHL40Q2TBA0 621 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 MEI1Q5TIA1 1274 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 NXPE4Q6UWF7 544 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.06□□□□□ -1.28
CLPX-206ENST00000560166 KCTD1Q719H9 257 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 KRT25Q7Z3Z0 450 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 HEATR3Q7Z4Q2 680 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 FBXO11Q86XK2 927 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 ERO1BQ86YB8 467 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 BLIDQ8IZY5 108 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 PRPF38AQ8NAV1 312 aaKnown RBP7.06□□□□□ -1.28
CLPX-206ENST00000560166 PIGSQ96S52 555 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 AMNQ9BXJ7 453 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 RANBP17Q9H2T7 1088 aaKnown RBP7.06□□□□□ -1.28
CLPX-206ENST00000560166 BRD7Q9NPI1 651 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 LMBRD1Q9NUN5 540 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 VPS54Q9P1Q0 977 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 NOL7Q9UMY1 257 aaKnown RBP7.06□□□□□ -1.28
CLPX-206ENST00000560166 CEP131Q9UPN4 1083 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 KCNH4Q9UQ05 1017 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 AFG3L2Q9Y4W6 797 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 PCDHGB7Q9Y5F8 929 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 SNCAIPQ9Y6H5 919 aa7.06□□□□□ -1.28
CLPX-206ENST00000560166 BTBD18B2RXH4 712 aa7.05□□□□□ -1.28
CLPX-206ENST00000560166 KIF28PB7ZC32 967 aa7.05□□□□□ -1.28
CLPX-206ENST00000560166 ATP2A1O14983 1001 aa7.05□□□□□ -1.28
CLPX-206ENST00000560166 PPP6R2O75170 966 aa7.05□□□□□ -1.28
CLPX-206ENST00000560166 VCAM1P19320 739 aa7.05□□□□□ -1.28
CLPX-206ENST00000560166 ADCY7P51828 1080 aa7.05□□□□□ -1.28
CLPX-206ENST00000560166 MRPL12P52815 198 aaKnown RBP7.05□□□□□ -1.28
CLPX-206ENST00000560166 OAZ1P54368 228 aa7.05□□□□□ -1.28
CLPX-206ENST00000560166 NAPAP54920 295 aa7.05□□□□□ -1.28
CLPX-206ENST00000560166 GUCY1B3Q02153 619 aa7.05□□□□□ -1.28
CLPX-206ENST00000560166 GHRHRQ02643 423 aa7.05□□□□□ -1.28
CLPX-206ENST00000560166 PPIL2Q13356 520 aa7.05□□□□□ -1.28
CLPX-206ENST00000560166 AP3B2Q13367 1082 aa7.05□□□□□ -1.28
CLPX-206ENST00000560166 SLC39A14Q15043 492 aa7.05□□□□□ -1.28
CLPX-206ENST00000560166 QRICH1Q2TAL8 776 aa7.05□□□□□ -1.28
CLPX-206ENST00000560166 FAM83BQ5T0W9 1011 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms